BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6c10
(665 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein ... 25 1.6
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 24 3.7
AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding pr... 24 5.0
AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding pr... 24 5.0
AF513638-1|AAM53610.1| 210|Anopheles gambiae glutathione S-tran... 23 6.5
CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase ... 23 8.7
>AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein
protein.
Length = 814
Score = 25.4 bits (53), Expect = 1.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 97 LTTDSPMPVAAPVIKT 50
LT +SP+PV+ PVI T
Sbjct: 798 LTAESPLPVSPPVIGT 813
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 24.2 bits (50), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 482 WHNVRLRQSGNRRNVDNCTSFTTAVLPHYLNGF 384
W NV + +SG+R+ ++ TT+ YL GF
Sbjct: 635 WKNVSIGRSGSRKLIEVVPDTTTS---WYLTGF 664
>AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP34 protein.
Length = 311
Score = 23.8 bits (49), Expect = 5.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 605 QRGVCCTKAHCQYSDPGFRKVFRSTDTITELQHSAF 498
Q+ + C K+ CQ + F+ F + + L H+ F
Sbjct: 247 QKKLACKKSTCQQAYDTFQNCFGESRGLEYLLHTVF 282
>AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP37 protein.
Length = 311
Score = 23.8 bits (49), Expect = 5.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 605 QRGVCCTKAHCQYSDPGFRKVFRSTDTITELQHSAF 498
Q+ + C K+ CQ + F+ F + + L H+ F
Sbjct: 247 QKKLACKKSTCQQAYDTFQNCFGESRGLEYLLHTVF 282
>AF513638-1|AAM53610.1| 210|Anopheles gambiae glutathione
S-transferase D3 protein.
Length = 210
Score = 23.4 bits (48), Expect = 6.5
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2
Query: 514 CSTALLVAKYIGIT 473
C +A+LVAK +GIT
Sbjct: 12 CQSAILVAKKLGIT 25
>CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase
protein.
Length = 562
Score = 23.0 bits (47), Expect = 8.7
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3
Query: 255 NAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALI 371
N + + V ++ L N + G++ KAI + TAL+
Sbjct: 196 NVTIFGESAGGVAVHYLVLSNKASGLFHKAIAQSGTALV 234
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,004
Number of Sequences: 2352
Number of extensions: 13996
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -