Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6c09
(627 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55362-1|CAA39047.1| 461|Homo sapiens ornithine decarboxylase p... 60 8e-09
X16277-1|CAA34353.1| 461|Homo sapiens ornithine decarboxylase (... 60 8e-09
M81740-1|AAA59967.1| 461|Homo sapiens ornithine decarboxylase p... 60 8e-09
M34158-1|AAA59969.1| 461|Homo sapiens ornithine decarboxylase p... 60 8e-09
M33764-1|AAA60564.1| 461|Homo sapiens protein ( Human ornithine... 60 8e-09
M31061-1|AAA60563.1| 461|Homo sapiens ODC1 protein. 60 8e-09
M16650-1|AAA59966.2| 461|Homo sapiens ornithine decarboxylase p... 60 8e-09
BC025296-1|AAH25296.1| 461|Homo sapiens ornithine decarboxylase... 60 8e-09
AY841870-1|AAV88093.1| 461|Homo sapiens ornithine decarboxylase... 60 8e-09
AC007249-2|AAY15034.1| 461|Homo sapiens unknown protein. 60 8e-09
D88674-1|BAA23593.1| 448|Homo sapiens antizyme inhibitor protein. 46 8e-05
CR456745-1|CAG33026.1| 448|Homo sapiens OAZIN protein. 46 8e-05
BT006858-1|AAP35504.1| 448|Homo sapiens ornithine decarboxylase... 46 8e-05
BC019279-1|AAH19279.1| 448|Homo sapiens antizyme inhibitor 1 pr... 46 8e-05
BC013420-1|AAH13420.1| 448|Homo sapiens antizyme inhibitor 1 pr... 46 8e-05
BC028128-1|AAH28128.1| 460|Homo sapiens arginine decarboxylase ... 44 6e-04
BC010449-1|AAH10449.1| 460|Homo sapiens ADC protein protein. 44 6e-04
AY325129-1|AAQ62560.1| 460|Homo sapiens arginine decarboxylase ... 44 6e-04
AY050638-1|AAL08053.1| 204|Homo sapiens ornithine decarboxylase... 44 6e-04
AY050637-1|AAL08052.1| 362|Homo sapiens ornithine decarboxylase... 44 6e-04
AY050636-1|AAL08051.1| 374|Homo sapiens ornithine decarboxylase... 44 6e-04
AY050635-1|AAL08050.1| 480|Homo sapiens ornithine decarboxylase... 44 6e-04
AY050634-1|AAL08049.1| 460|Homo sapiens ornithine decarboxylase... 44 6e-04
AL020995-5|CAI19355.1| 480|Homo sapiens arginine decarboxylase ... 44 6e-04
AL020995-4|CAI19354.1| 460|Homo sapiens arginine decarboxylase ... 44 6e-04
AL020995-3|CAI19353.1| 204|Homo sapiens arginine decarboxylase ... 44 6e-04
AB075825-1|BAB85531.1| 420|Homo sapiens KIAA1945 protein protein. 44 6e-04
DQ185043-1|ABD14423.1| 154|Homo sapiens ornithine decarboxylase... 40 0.005
DQ139275-1|ABA43896.1| 1313|Homo sapiens Tax1-binding protein 2 ... 31 2.5
DQ079590-1|AAZ30918.1| 858|Homo sapiens ZXD-like zinc finger pr... 31 2.5
BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet coiled-... 31 2.5
BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet coiled-... 31 2.5
AY936556-1|AAX23974.1| 858|Homo sapiens ZXD family zinc finger ... 31 2.5
AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet coiled-... 31 2.5
AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet coiled-... 31 2.5
AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein. 31 2.5
U82483-1|AAC13661.1| 382|Homo sapiens vascular addressin MAdCAM... 31 4.4
BC128464-1|AAI28465.1| 235|Homo sapiens myc target 1 protein. 30 5.8
BC128463-1|AAI28464.1| 235|Homo sapiens myc target 1 protein. 30 5.8
BC022556-1|AAH22556.2| 220|Homo sapiens MYCT1 protein protein. 30 5.8
AL390960-1|CAI23573.1| 235|Homo sapiens myc target 1 protein. 30 5.8
AK024922-1|BAB15035.1| 235|Homo sapiens protein ( Homo sapiens ... 30 5.8
AF527367-1|AAM88866.1| 235|Homo sapiens MTLC protein. 30 5.8
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 30 7.7
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 30 7.7
J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human cartilage... 30 7.7
J00221-1|AAB59396.1| 339|Homo sapiens immunoglobulin alpha-2 he... 30 7.7
BX640854-1|CAE45921.1| 479|Homo sapiens hypothetical protein pr... 30 7.7
BX538077-1|CAD98001.1| 492|Homo sapiens hypothetical protein pr... 30 7.7
BX538066-1|CAD97996.1| 478|Homo sapiens hypothetical protein pr... 30 7.7
BC073765-1|AAH73765.1| 477|Homo sapiens IGHA2 protein protein. 30 7.7
BC066594-1|AAH66594.1| 478|Homo sapiens Unknown (protein for MG... 30 7.7
BC065733-1|AAH65733.1| 480|Homo sapiens Unknown (protein for MG... 30 7.7
AY647979-1|AAT74071.1| 340|Homo sapiens immunoglobulin alpha 2m... 30 7.7
AL389978-1|CAB97534.1| 416|Homo sapiens Immunoglobulin heavy ... 30 7.7
AK126352-1|BAC86532.1| 490|Homo sapiens protein ( Homo sapiens ... 30 7.7
AK125079-1|BAC86044.1| 477|Homo sapiens protein ( Homo sapiens ... 30 7.7
AK123975-1|BAC85740.1| 487|Homo sapiens protein ( Homo sapiens ... 30 7.7
AK057862-1|BAB71599.1| 306|Homo sapiens protein ( Homo sapiens ... 30 7.7
>X55362-1|CAA39047.1| 461|Homo sapiens ornithine decarboxylase
protein.
Length = 461
Score = 59.7 bits (138), Expect = 8e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 458 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDDK 589
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKCND K
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSK 74
>X16277-1|CAA34353.1| 461|Homo sapiens ornithine decarboxylase
(ODC) protein.
Length = 461
Score = 59.7 bits (138), Expect = 8e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 458 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDDK 589
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKCND K
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSK 74
>M81740-1|AAA59967.1| 461|Homo sapiens ornithine decarboxylase
protein.
Length = 461
Score = 59.7 bits (138), Expect = 8e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 458 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDDK 589
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKCND K
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSK 74
>M34158-1|AAA59969.1| 461|Homo sapiens ornithine decarboxylase
protein.
Length = 461
Score = 59.7 bits (138), Expect = 8e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 458 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDDK 589
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKCND K
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSK 74
>M33764-1|AAA60564.1| 461|Homo sapiens protein ( Human ornithine
decarboxylase gene, complete cds. ).
Length = 461
Score = 59.7 bits (138), Expect = 8e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 458 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDDK 589
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKCND K
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSK 74
>M31061-1|AAA60563.1| 461|Homo sapiens ODC1 protein.
Length = 461
Score = 59.7 bits (138), Expect = 8e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 458 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDDK 589
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKCND K
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSK 74
>M16650-1|AAA59966.2| 461|Homo sapiens ornithine decarboxylase
protein.
Length = 461
Score = 59.7 bits (138), Expect = 8e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 458 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDDK 589
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKCND K
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSK 74
>BC025296-1|AAH25296.1| 461|Homo sapiens ornithine decarboxylase 1
protein.
Length = 461
Score = 59.7 bits (138), Expect = 8e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 458 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDDK 589
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKCND K
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSK 74
>AY841870-1|AAV88093.1| 461|Homo sapiens ornithine decarboxylase 1
protein.
Length = 461
Score = 59.7 bits (138), Expect = 8e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 458 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDDK 589
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKCND K
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSK 74
>AC007249-2|AAY15034.1| 461|Homo sapiens unknown protein.
Length = 461
Score = 59.7 bits (138), Expect = 8e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 458 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDDK 589
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKCND K
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSK 74
>D88674-1|BAA23593.1| 448|Homo sapiens antizyme inhibitor protein.
Length = 448
Score = 46.4 bits (105), Expect = 8e-05
Identities = 15/35 (42%), Positives = 28/35 (80%)
Frame = +2
Query: 476 EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
++ F+V DLG++V ++ QW+ ++ +++PFY VKCN
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCN 71
>CR456745-1|CAG33026.1| 448|Homo sapiens OAZIN protein.
Length = 448
Score = 46.4 bits (105), Expect = 8e-05
Identities = 15/35 (42%), Positives = 28/35 (80%)
Frame = +2
Query: 476 EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
++ F+V DLG++V ++ QW+ ++ +++PFY VKCN
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCN 71
>BT006858-1|AAP35504.1| 448|Homo sapiens ornithine decarboxylase
antizyme inhibitor protein.
Length = 448
Score = 46.4 bits (105), Expect = 8e-05
Identities = 15/35 (42%), Positives = 28/35 (80%)
Frame = +2
Query: 476 EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
++ F+V DLG++V ++ QW+ ++ +++PFY VKCN
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCN 71
>BC019279-1|AAH19279.1| 448|Homo sapiens antizyme inhibitor 1
protein.
Length = 448
Score = 46.4 bits (105), Expect = 8e-05
Identities = 15/35 (42%), Positives = 28/35 (80%)
Frame = +2
Query: 476 EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
++ F+V DLG++V ++ QW+ ++ +++PFY VKCN
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCN 71
>BC013420-1|AAH13420.1| 448|Homo sapiens antizyme inhibitor 1
protein.
Length = 448
Score = 46.4 bits (105), Expect = 8e-05
Identities = 15/35 (42%), Positives = 28/35 (80%)
Frame = +2
Query: 476 EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
++ F+V DLG++V ++ QW+ ++ +++PFY VKCN
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCN 71
>BC028128-1|AAH28128.1| 460|Homo sapiens arginine decarboxylase
protein.
Length = 460
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 485 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
F+V DLG +V ++ + + LPRV PFYAVKCN
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCN 72
>BC010449-1|AAH10449.1| 460|Homo sapiens ADC protein protein.
Length = 460
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 485 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
F+V DLG +V ++ + + LPRV PFYAVKCN
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCN 72
>AY325129-1|AAQ62560.1| 460|Homo sapiens arginine decarboxylase
protein.
Length = 460
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 485 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
F+V DLG +V ++ + + LPRV PFYAVKCN
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCN 72
>AY050638-1|AAL08053.1| 204|Homo sapiens ornithine
decarboxylase-like protein variant 6 protein.
Length = 204
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 485 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
F+V DLG +V ++ + + LPRV PFYAVKCN
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCN 72
>AY050637-1|AAL08052.1| 362|Homo sapiens ornithine
decarboxylase-like protein variant 3 protein.
Length = 362
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 485 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
F+V DLG +V ++ + + LPRV PFYAVKCN
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCN 72
>AY050636-1|AAL08051.1| 374|Homo sapiens ornithine
decarboxylase-like protein variant 4 protein.
Length = 374
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 485 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
F+V DLG +V ++ + + LPRV PFYAVKCN
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCN 72
>AY050635-1|AAL08050.1| 480|Homo sapiens ornithine
decarboxylase-like protein variant 2 protein.
Length = 480
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 485 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
F+V DLG +V ++ + + LPRV PFYAVKCN
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCN 72
>AY050634-1|AAL08049.1| 460|Homo sapiens ornithine
decarboxylase-like protein variant 1 protein.
Length = 460
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 485 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
F+V DLG +V ++ + + LPRV PFYAVKCN
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCN 72
>AL020995-5|CAI19355.1| 480|Homo sapiens arginine decarboxylase
protein.
Length = 480
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 485 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
F+V DLG +V ++ + + LPRV PFYAVKCN
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCN 72
>AL020995-4|CAI19354.1| 460|Homo sapiens arginine decarboxylase
protein.
Length = 460
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 485 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
F+V DLG +V ++ + + LPRV PFYAVKCN
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCN 72
>AL020995-3|CAI19353.1| 204|Homo sapiens arginine decarboxylase
protein.
Length = 204
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 485 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
F+V DLG +V ++ + + LPRV PFYAVKCN
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCN 72
>AB075825-1|BAB85531.1| 420|Homo sapiens KIAA1945 protein protein.
Length = 420
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 485 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 580
F+V DLG +V ++ + + LPRV PFYAVKCN
Sbjct: 46 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCN 77
>DQ185043-1|ABD14423.1| 154|Homo sapiens ornithine decarboxylase 1
protein.
Length = 154
Score = 40.3 bits (90), Expect = 0.005
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 518 RYQQWKELLPRVEPFYAVKCNDDK 589
++ +W + LPRV PFYAVKCND K
Sbjct: 2 KHLRWLKALPRVTPFYAVKCNDSK 25
>DQ139275-1|ABA43896.1| 1313|Homo sapiens Tax1-binding protein 2
protein.
Length = 1313
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 61 SPARVAVPGGTDAHXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 210
SPA VPG + PST PG P P ATSP SPD
Sbjct: 754 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 804
>DQ079590-1|AAZ30918.1| 858|Homo sapiens ZXD-like zinc finger
protein protein.
Length = 858
Score = 31.5 bits (68), Expect = 2.5
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Frame = -2
Query: 299 FLVTFQLS-GLAVSSVVGAWSWGPTS----ASPQVSGECGEVASAGPGTAQPGRVYVEXX 135
FLV ++ G A + G+ P S AS G G A+ GPG A G V +
Sbjct: 75 FLVLLEVPHGGAAAEAAGSQEAEPGSRVNLASRPEQGPSGPAAAPGPGVAPAGAVTISSQ 134
Query: 134 XXXXXXXXXXGCASVPPGTAT 72
S PPG AT
Sbjct: 135 DLLVRLDRGVLALSAPPGPAT 155
>BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 1898
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 61 SPARVAVPGGTDAHXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 210
SPA VPG + PST PG P P ATSP SPD
Sbjct: 1332 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 1382
>BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 2017
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 61 SPARVAVPGGTDAHXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 210
SPA VPG + PST PG P P ATSP SPD
Sbjct: 1451 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 1501
>AY936556-1|AAX23974.1| 858|Homo sapiens ZXD family zinc finger C
protein.
Length = 858
Score = 31.5 bits (68), Expect = 2.5
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Frame = -2
Query: 299 FLVTFQLS-GLAVSSVVGAWSWGPTS----ASPQVSGECGEVASAGPGTAQPGRVYVEXX 135
FLV ++ G A + G+ P S AS G G A+ GPG A G V +
Sbjct: 75 FLVLLEVPHGGAAAEAAGSQEAEPGSRVNLASRPEQGPSGPAAAPGPGVAPAGAVTISSQ 134
Query: 134 XXXXXXXXXXGCASVPPGTAT 72
S PPG AT
Sbjct: 135 DLLVRLDRGVLALSAPPGPAT 155
>AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 1898
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 61 SPARVAVPGGTDAHXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 210
SPA VPG + PST PG P P ATSP SPD
Sbjct: 1332 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 1382
>AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 2017
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 61 SPARVAVPGGTDAHXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 210
SPA VPG + PST PG P P ATSP SPD
Sbjct: 1451 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 1501
>AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein.
Length = 1919
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 61 SPARVAVPGGTDAHXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPD 210
SPA VPG + PST PG P P ATSP SPD
Sbjct: 1353 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPD 1403
>U82483-1|AAC13661.1| 382|Homo sapiens vascular addressin MAdCAM-1
protein.
Length = 382
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 172 PGPADATSPHSPDTCGLALVGPQDQAPTTLDTANPD 279
P P D TSP SPDT + P +P DT +P+
Sbjct: 230 PEPPDTTSPESPDT--TSPESPDTTSPEPPDTTSPE 263
>BC128464-1|AAI28465.1| 235|Homo sapiens myc target 1 protein.
Length = 235
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 384 MVLSNFTWTCFLSLSRARRGPAPRS 310
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>BC128463-1|AAI28464.1| 235|Homo sapiens myc target 1 protein.
Length = 235
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 384 MVLSNFTWTCFLSLSRARRGPAPRS 310
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>BC022556-1|AAH22556.2| 220|Homo sapiens MYCT1 protein protein.
Length = 220
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 384 MVLSNFTWTCFLSLSRARRGPAPRS 310
+VL F W F+ LSR RR AP S
Sbjct: 65 LVLGGFIWAVFICLSRRRRASAPIS 89
>AL390960-1|CAI23573.1| 235|Homo sapiens myc target 1 protein.
Length = 235
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 384 MVLSNFTWTCFLSLSRARRGPAPRS 310
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>AK024922-1|BAB15035.1| 235|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21269 fis, clone COL01745. ).
Length = 235
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 384 MVLSNFTWTCFLSLSRARRGPAPRS 310
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>AF527367-1|AAM88866.1| 235|Homo sapiens MTLC protein.
Length = 235
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 384 MVLSNFTWTCFLSLSRARRGPAPRS 310
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 29.9 bits (64), Expect = 7.7
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -2
Query: 278 SGLAVSSVVGAWSWGPTSASPQVSGECGEVASAGPGTAQPG 156
SGL VS + G SA+P+VSGE ++ GT PG
Sbjct: 253 SGLGVSGSTLTFQEGEASAAPEVSGE--STTTSDVGTEAPG 291
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 29.9 bits (64), Expect = 7.7
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -2
Query: 278 SGLAVSSVVGAWSWGPTSASPQVSGECGEVASAGPGTAQPG 156
SGL VS + G SA+P+VSGE ++ GT PG
Sbjct: 2030 SGLGVSGSTLTFQEGEASAAPEVSGE--STTTSDVGTEAPG 2068
>J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human
cartilage-specific proteoglycan core protein (CSPCP)
mRNA, 3' end. ).
Length = 480
Score = 29.9 bits (64), Expect = 7.7
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -2
Query: 278 SGLAVSSVVGAWSWGPTSASPQVSGECGEVASAGPGTAQPG 156
SGL VS + G SA+P+VSGE ++ GT PG
Sbjct: 95 SGLGVSGSTLTFQEGEASAAPEVSGE--STTTSDVGTEAPG 133
>J00221-1|AAB59396.1| 339|Homo sapiens immunoglobulin alpha-2 heavy
chain protein.
Length = 339
Score = 29.9 bits (64), Expect = 7.7
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = -2
Query: 407 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPT 228
C VPP P C+P L SL P +T L+GL +S ++W P+
Sbjct: 100 CPVPPPPPCCHPRL----SLHRP---ALEDLLLGSEANLTCTLTGLRDAS-GATFTWTPS 151
Query: 227 SASPQVSGE-------CGEVASAGPGTAQP 159
S V G C V+S PG AQP
Sbjct: 152 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 181
>BX640854-1|CAE45921.1| 479|Homo sapiens hypothetical protein
protein.
Length = 479
Score = 29.9 bits (64), Expect = 7.7
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = -2
Query: 407 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPT 228
C VPP P C+P L SL P +T L+GL +S ++W P+
Sbjct: 240 CPVPPPPPCCHPRL----SLHRP---ALEDLLLGSEANLTCTLTGLRDAS-GATFTWTPS 291
Query: 227 SASPQVSGE-------CGEVASAGPGTAQP 159
S V G C V+S PG AQP
Sbjct: 292 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 321
>BX538077-1|CAD98001.1| 492|Homo sapiens hypothetical protein
protein.
Length = 492
Score = 29.9 bits (64), Expect = 7.7
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = -2
Query: 407 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPT 228
C VPP P C+P L SL P +T L+GL +S ++W P+
Sbjct: 253 CPVPPPPPCCHPRL----SLHRP---ALEDLLLGSEANLTCTLTGLRDAS-GATFTWTPS 304
Query: 227 SASPQVSGE-------CGEVASAGPGTAQP 159
S V G C V+S PG AQP
Sbjct: 305 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 334
>BX538066-1|CAD97996.1| 478|Homo sapiens hypothetical protein
protein.
Length = 478
Score = 29.9 bits (64), Expect = 7.7
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = -2
Query: 407 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPT 228
C VPP P C+P L SL P +T L+GL +S ++W P+
Sbjct: 239 CPVPPPPPCCHPRL----SLHRP---ALEDLLLGSEANLTCTLTGLRDAS-GATFTWTPS 290
Query: 227 SASPQVSGE-------CGEVASAGPGTAQP 159
S V G C V+S PG AQP
Sbjct: 291 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 320
>BC073765-1|AAH73765.1| 477|Homo sapiens IGHA2 protein protein.
Length = 477
Score = 29.9 bits (64), Expect = 7.7
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = -2
Query: 407 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPT 228
C VPP P C+P L SL P +T L+GL +S ++W P+
Sbjct: 238 CPVPPPPPCCHPRL----SLHRP---ALEDLLLGSEANLTCTLTGLRDAS-GATFTWTPS 289
Query: 227 SASPQVSGE-------CGEVASAGPGTAQP 159
S V G C V+S PG AQP
Sbjct: 290 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 319
>BC066594-1|AAH66594.1| 478|Homo sapiens Unknown (protein for
MGC:70893) protein.
Length = 478
Score = 29.9 bits (64), Expect = 7.7
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = -2
Query: 407 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPT 228
C VPP P C+P L SL P +T L+GL +S ++W P+
Sbjct: 239 CPVPPPPPCCHPRL----SLHRP---ALEDLLLGSEANLTCTLTGLRDAS-GATFTWTPS 290
Query: 227 SASPQVSGE-------CGEVASAGPGTAQP 159
S V G C V+S PG AQP
Sbjct: 291 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 320
>BC065733-1|AAH65733.1| 480|Homo sapiens Unknown (protein for
MGC:72071) protein.
Length = 480
Score = 29.9 bits (64), Expect = 7.7
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = -2
Query: 407 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPT 228
C VPP P C+P L SL P +T L+GL +S ++W P+
Sbjct: 241 CPVPPPPPCCHPRL----SLHRP---ALEDLLLGSEANLTCTLTGLRDAS-GATFTWTPS 292
Query: 227 SASPQVSGE-------CGEVASAGPGTAQP 159
S V G C V+S PG AQP
Sbjct: 293 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 322
>AY647979-1|AAT74071.1| 340|Homo sapiens immunoglobulin alpha 2m(1)
heavy chain constant region protein.
Length = 340
Score = 29.9 bits (64), Expect = 7.7
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = -2
Query: 407 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPT 228
C VPP P C+P L SL P +T L+GL +S ++W P+
Sbjct: 101 CPVPPPPPCCHPRL----SLHRP---ALEDLLLGSEANLTCTLTGLRDAS-GATFTWTPS 152
Query: 227 SASPQVSGE-------CGEVASAGPGTAQP 159
S V G C V+S PG AQP
Sbjct: 153 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 182
>AL389978-1|CAB97534.1| 416|Homo sapiens Immunoglobulin heavy
chain variant protein.
Length = 416
Score = 29.9 bits (64), Expect = 7.7
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = -2
Query: 407 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPT 228
C VPP P C+P L SL P +T L+GL +S ++W P+
Sbjct: 177 CPVPPPPPCCHPRL----SLHRP---ALEDLLLGSEANLTCTLTGLRDAS-GATFTWTPS 228
Query: 227 SASPQVSGE-------CGEVASAGPGTAQP 159
S V G C V+S PG AQP
Sbjct: 229 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 258
>AK126352-1|BAC86532.1| 490|Homo sapiens protein ( Homo sapiens
cDNA FLJ44381 fis, clone TRACH3035526, highly similar
to Ig alpha-2 chain C region. ).
Length = 490
Score = 29.9 bits (64), Expect = 7.7
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = -2
Query: 407 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPT 228
C VPP P C+P L SL P +T L+GL +S ++W P+
Sbjct: 251 CPVPPPPPCCHPRL----SLHRP---ALEDLLLGSEANLTCTLTGLRDAS-GATFTWTPS 302
Query: 227 SASPQVSGE-------CGEVASAGPGTAQP 159
S V G C V+S PG AQP
Sbjct: 303 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 332
>AK125079-1|BAC86044.1| 477|Homo sapiens protein ( Homo sapiens
cDNA FLJ43089 fis, clone COLON2000568, highly similar
to Ig alpha-2 chain C region. ).
Length = 477
Score = 29.9 bits (64), Expect = 7.7
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = -2
Query: 407 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPT 228
C VPP P C+P L SL P +T L+GL +S ++W P+
Sbjct: 238 CPVPPPPPCCHPRL----SLHRP---ALEDLLLGSEANLTCTLTGLRDAS-GATFTWTPS 289
Query: 227 SASPQVSGE-------CGEVASAGPGTAQP 159
S V G C V+S PG AQP
Sbjct: 290 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 319
>AK123975-1|BAC85740.1| 487|Homo sapiens protein ( Homo sapiens
cDNA FLJ41981 fis, clone SMINT2011888, highly similar
to Protein Tro alpha1 H,myeloma. ).
Length = 487
Score = 29.9 bits (64), Expect = 7.7
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = -2
Query: 407 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPT 228
C VPP P C+P L SL P +T L+GL +S ++W P+
Sbjct: 248 CPVPPPPPCCHPRL----SLHRP---ALEDLLLGSEANLTCTLTGLRDAS-GATFTWTPS 299
Query: 227 SASPQVSGE-------CGEVASAGPGTAQP 159
S V G C V+S PG AQP
Sbjct: 300 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 329
>AK057862-1|BAB71599.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ25133 fis, clone CBR06869, highly similar to
THYROID RECEPTOR INTERACTING PROTEIN 9. ).
Length = 306
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 426 RGPRSA*SGRSWRAGCRRTPST*WTSARLSPATSSG 533
R P RSW GCR PS+ TS R+ S+G
Sbjct: 16 RPPEDLGWARSWARGCRGLPSSSATSLRMGTRFSAG 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,674,678
Number of Sequences: 237096
Number of extensions: 2223672
Number of successful extensions: 8370
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 7258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8326
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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