Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6c09
(627 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094710-1|AAM11063.1| 394|Drosophila melanogaster GH13851p pro... 49 5e-06
AE013599-568|AAF59150.1| 394|Drosophila melanogaster CG8721-PA ... 49 5e-06
X66601-1|CAA47167.1| 394|Drosophila melanogaster ornithine deca... 48 8e-06
X66599-1|CAA47165.1| 394|Drosophila melanogaster ornithine dec... 48 8e-06
X66600-1|CAA47166.1| 393|Drosophila melanogaster ornithine dec... 46 6e-05
AE013599-569|AAF59149.2| 393|Drosophila melanogaster CG8719-PA ... 46 6e-05
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 31 1.3
AY118656-1|AAM50025.1| 1242|Drosophila melanogaster SD07467p pro... 29 6.8
AE013599-1825|AAF58294.1| 1242|Drosophila melanogaster CG8241-PA... 29 6.8
BT023037-1|AAY55453.1| 143|Drosophila melanogaster IP04031p pro... 28 9.0
>AY094710-1|AAM11063.1| 394|Drosophila melanogaster GH13851p
protein.
Length = 394
Score = 49.2 bits (112), Expect = 5e-06
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +2
Query: 437 VSVIREIVESGVQ--EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 586
+++ R I E +Q + + DL V + + W++LLPR++PFYAVKCNDD
Sbjct: 15 LNIRRVIEECDLQRLDQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDD 66
>AE013599-568|AAF59150.1| 394|Drosophila melanogaster CG8721-PA
protein.
Length = 394
Score = 49.2 bits (112), Expect = 5e-06
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +2
Query: 437 VSVIREIVESGVQ--EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 586
+++ R I E +Q + + DL V + + W++LLPR++PFYAVKCNDD
Sbjct: 15 LNIRRVIEECDLQRLDQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDD 66
>X66601-1|CAA47167.1| 394|Drosophila melanogaster ornithine
decarboxylase protein.
Length = 394
Score = 48.4 bits (110), Expect = 8e-06
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +2
Query: 437 VSVIREIVESGVQ--EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 586
+++ R I E +Q + + DL V + W++LLPR++PFYAVKCNDD
Sbjct: 15 LNIRRVIEECDLQRLDQALNICDLSSVERNVRLWQKLLPRIKPFYAVKCNDD 66
>X66599-1|CAA47165.1| 394|Drosophila melanogaster ornithine
decarboxylase protein.
Length = 394
Score = 48.4 bits (110), Expect = 8e-06
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +2
Query: 437 VSVIREIVESGVQ--EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 586
+++ R I E +Q + + DL V + W++LLPR++PFYAVKCNDD
Sbjct: 15 LNIRRVIEECDLQRLDQALNICDLSSVERNVRLWQKLLPRIKPFYAVKCNDD 66
>X66600-1|CAA47166.1| 393|Drosophila melanogaster ornithine
decarboxylase protein.
Length = 393
Score = 45.6 bits (103), Expect = 6e-05
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 446 IREIVESGVQE---DPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 586
IR+++E E + DL + + + W +L+PR+EP YAVKCNDD
Sbjct: 17 IRKVIEQADLEHLDQALNICDLSSLERKLRLWHKLMPRIEPHYAVKCNDD 66
>AE013599-569|AAF59149.2| 393|Drosophila melanogaster CG8719-PA
protein.
Length = 393
Score = 45.6 bits (103), Expect = 6e-05
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 446 IREIVESGVQE---DPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 586
IR+++E E + DL + + + W +L+PR+EP YAVKCNDD
Sbjct: 17 IRKVIEQADLEHLDQALNICDLSSLERKLRLWHKLMPRIEPHYAVKCNDD 66
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 513 TTSPRSIT*KGSSCTPLSTISRITLTGDHD-PSITLMRCSSTT 388
TT+PR T S+C P +T R T T P+ T RC++TT
Sbjct: 269 TTTPRCTT-TTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTT 310
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 513 TTSPRSIT*KGSSCTPLSTISRITLTGDHDPSITLMRCSSTT 388
TT+PRS T +SC +T T T P+ T R ++TT
Sbjct: 909 TTTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTTTTPRSTTTT 950
Score = 29.9 bits (64), Expect = 2.9
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -1
Query: 513 TTSPRSIT*KGSSCTPLSTISR-ITLTGDHDPSITLMRCSSTTFMVLSNFTWTCFLSLSR 337
TT+PR T S+C+P T R T T P+ T RC TT S T T S ++
Sbjct: 301 TTTPRCTT-TTSTCSPTRTTPRSTTTTSTSRPTTTTPRC--TTTPSTSRPTTTTPRSTTK 357
Query: 336 ARRGPAPRSTVPFP 295
AP +T P P
Sbjct: 358 TST-CAPTTTTPRP 370
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 513 TTSPRSIT*KGSSCTPLSTISRITLTGDHDPSITLMRCSSTT 388
TT+PRS T +S +T T T P+ T RC++TT
Sbjct: 237 TTTPRSTTTTTTSRPTTTTPRSTTTTTTRRPTTTTPRCTTTT 278
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 513 TTSPRSIT*KGSSCTPLSTISRITLTGDHDPSITLMRCSSTT 388
TT+PRS T +SC +T T T P+ T R ++TT
Sbjct: 941 TTTPRSTTTTCTSCPTTTTPRSTTTTCTSCPTTTTPRSTTTT 982
>AY118656-1|AAM50025.1| 1242|Drosophila melanogaster SD07467p
protein.
Length = 1242
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 257 VVGAWSWGPTSASPQVSGECGEVASAGPGTAQPGRV 150
V+G G T+ Q GECG A G QP RV
Sbjct: 607 VIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRV 642
>AE013599-1825|AAF58294.1| 1242|Drosophila melanogaster CG8241-PA
protein.
Length = 1242
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 257 VVGAWSWGPTSASPQVSGECGEVASAGPGTAQPGRV 150
V+G G T+ Q GECG A G QP RV
Sbjct: 607 VIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRV 642
>BT023037-1|AAY55453.1| 143|Drosophila melanogaster IP04031p
protein.
Length = 143
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 456 SWRAG---CRRTPST*WTSARLSPATSSGRSSCPGLSRFT 566
SWR G R PS+ WTS R +P+ S S+ +R+T
Sbjct: 11 SWRRGGPATRTRPSSIWTSTRSAPSFSLSTSAPSPRTRWT 50
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,802,575
Number of Sequences: 53049
Number of extensions: 618872
Number of successful extensions: 1880
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1877
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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