Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6c09
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64854-5|AAB18317.1| 422|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U03059-1|AAA88795.1| 422|Caenorhabditis elegans ornithine decar... 56 3e-08
U97191-6|AAM15576.1| 263|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U97191-5|AAB52428.1| 477|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical ... 30 1.6
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z83319-2|CAB05904.2| 433|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL132898-21|CAC14418.2| 617|Caenorhabditis elegans Hypothetical... 28 6.3
AL132863-12|CAC15862.2| 617|Caenorhabditis elegans Hypothetical... 28 6.3
AF160189-1|AAD45355.1| 617|Caenorhabditis elegans putative seri... 28 6.3
AF039048-9|AAB94233.1| 362|Caenorhabditis elegans Hypothetical ... 28 6.3
AF039048-8|AAT68896.1| 367|Caenorhabditis elegans Hypothetical ... 28 6.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 8.3
U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase ... 27 8.3
U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase ... 27 8.3
U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase ... 27 8.3
J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein ( C.ele... 27 8.3
>U64854-5|AAB18317.1| 422|Caenorhabditis elegans Hypothetical
protein K11C4.4 protein.
Length = 422
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +2
Query: 386 KVVEEQRIRVMEGSWSPVSVIREIVES-GVQEDP--FYVMDLGEVVARYQQWKELLPRVE 556
+++ + +I V+ + + R+I S +QE+ F ++DL +++ R+Q WK LP +E
Sbjct: 6 EIIGDNKIGVLPKQVDQLQMCRDIAASKDLQENDSSFMLVDLDKIIERFQLWKRELPMIE 65
Query: 557 PFYAVKCNDD 586
PFYAVKCN D
Sbjct: 66 PFYAVKCNTD 75
>U03059-1|AAA88795.1| 422|Caenorhabditis elegans ornithine
decarboxylase protein.
Length = 422
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +2
Query: 386 KVVEEQRIRVMEGSWSPVSVIREIVES-GVQEDP--FYVMDLGEVVARYQQWKELLPRVE 556
+++ + +I V+ + + R+I S +QE+ F ++DL +++ R+Q WK LP +E
Sbjct: 6 EIIGDNKIGVLPKQVDQLQMCRDIAASKDLQENDSSFMLVDLDKIIERFQLWKRELPMIE 65
Query: 557 PFYAVKCNDD 586
PFYAVKCN D
Sbjct: 66 PFYAVKCNTD 75
>U97191-6|AAM15576.1| 263|Caenorhabditis elegans Hypothetical
protein F53F10.2b protein.
Length = 263
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 398 EQRIRVMEGSW-SPVSVIREIVESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVK 574
EQ I V+ G++ +P+ + R + PF+VMD+ + R + + +LPRV P YAV
Sbjct: 27 EQSIAVLSGAYRNPIEMARHVAARCGSYQPFFVMDVAAIERRLEALRVMLPRVRPNYAVA 86
Query: 575 CNDD 586
CN D
Sbjct: 87 CNAD 90
>U97191-5|AAB52428.1| 477|Caenorhabditis elegans Hypothetical
protein F53F10.2a protein.
Length = 477
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 398 EQRIRVMEGSW-SPVSVIREIVESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVK 574
EQ I V+ G++ +P+ + R + PF+VMD+ + R + + +LPRV P YAV
Sbjct: 27 EQSIAVLSGAYRNPIEMARHVAARCGSYQPFFVMDVAAIERRLEALRVMLPRVRPNYAVA 86
Query: 575 CNDD 586
CN D
Sbjct: 87 CNAD 90
>AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical
protein K08D12.6 protein.
Length = 668
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +1
Query: 43 FWEHRVSPARVAVPGGTDAHXXXXXXXXXXDEPST*TRPGCAVPGPADATSPHSPDT 213
+ + +V+PA A P DA P+ P C PA A +P + D+
Sbjct: 292 YGDEQVTPAPAAAPAPADAPVEQAPVAVPAPAPAAAPAPDCGSAAPAPAAAPAATDS 348
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 101 CASVPPGTATRAGLTRCSQNKPP 33
C +V PG R+G RC+ N+PP
Sbjct: 74 CEAVWPGAYCRSGECRCANNQPP 96
>Z83319-2|CAB05904.2| 433|Caenorhabditis elegans Hypothetical
protein T02D1.6 protein.
Length = 433
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 305 CRFLVTFQLSGLAVSSVVGAWSWGPTSAS-PQVSGECGEVASAGPGTAQPGRVYV 144
C F+++ L + SV+G W +G T V G G +AS TA YV
Sbjct: 113 CDFVMSLSLPPAILDSVIGFWIFGTTMCKVHHVFGSVGRIASTFLITAMSFDRYV 167
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/28 (28%), Positives = 20/28 (71%)
Frame = +2
Query: 326 PRRARDKLRKQVHVKLDNTMKVVEEQRI 409
P R RD+++++V ++ + ++ EE+R+
Sbjct: 406 PHRTRDEIKREVQMEYERRWRIEEEERL 433
>AL132898-21|CAC14418.2| 617|Caenorhabditis elegans Hypothetical
protein Y59A8B.14 protein.
Length = 617
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = +1
Query: 82 PGGTDAHXXXXXXXXXXDEPST*TRPGCAVPGPA-----DATSPHSPDTCGLALVGPQDQ 246
P G + PS+ + P CA PGPA ++T+ + +T G+A D
Sbjct: 531 PDGVEGSEDSAAPLGPQRRPSSRSMPTCAPPGPAAGNAQNSTAENGAETDGVA--SASDP 588
Query: 247 APTTLDTANP 276
PT A P
Sbjct: 589 PPTAAPGAPP 598
>AL132863-12|CAC15862.2| 617|Caenorhabditis elegans Hypothetical
protein Y59A8B.14 protein.
Length = 617
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = +1
Query: 82 PGGTDAHXXXXXXXXXXDEPST*TRPGCAVPGPA-----DATSPHSPDTCGLALVGPQDQ 246
P G + PS+ + P CA PGPA ++T+ + +T G+A D
Sbjct: 531 PDGVEGSEDSAAPLGPQRRPSSRSMPTCAPPGPAAGNAQNSTAENGAETDGVA--SASDP 588
Query: 247 APTTLDTANP 276
PT A P
Sbjct: 589 PPTAAPGAPP 598
>AF160189-1|AAD45355.1| 617|Caenorhabditis elegans putative
serine-threonine kinasePAR-4 protein.
Length = 617
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = +1
Query: 82 PGGTDAHXXXXXXXXXXDEPST*TRPGCAVPGPA-----DATSPHSPDTCGLALVGPQDQ 246
P G + PS+ + P CA PGPA ++T+ + +T G+A D
Sbjct: 531 PDGVEGSEDSAAPLGPQRRPSSRSMPTCAPPGPAAGNAQNSTAENGAETDGVA--SASDP 588
Query: 247 APTTLDTANP 276
PT A P
Sbjct: 589 PPTAAPGAPP 598
>AF039048-9|AAB94233.1| 362|Caenorhabditis elegans Hypothetical
protein F16B4.2a protein.
Length = 362
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 347 LRKQVHVKLDNTM-KVVEEQRIRVMEGSWSPVSVIREIVE 463
LR+++H L K V E+R+ ++ S+ PV + RE+V+
Sbjct: 2 LRRRIHEILSRKFPKWVFEERLEPLDWSFLPVEIRREVVK 41
>AF039048-8|AAT68896.1| 367|Caenorhabditis elegans Hypothetical
protein F16B4.2b protein.
Length = 367
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 347 LRKQVHVKLDNTM-KVVEEQRIRVMEGSWSPVSVIREIVE 463
LR+++H L K V E+R+ ++ S+ PV + RE+V+
Sbjct: 2 LRRRIHEILSRKFPKWVFEERLEPLDWSFLPVEIRREVVK 41
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 83 RAERTHTPPXXXXXXXXTSPQRRPALAAPCQGPLTPP 193
R +PP SPQRRP P P PP
Sbjct: 148 RTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPP 184
>U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase
protein 2, isoform b protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 392 VEEQRIRVMEGSWSPV--SVIREIVESGVQEDPFYVMDLGEV 511
+EE + M + PV S I+E G + D FYV+D G V
Sbjct: 94 LEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVIDKGTV 135
>U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase
protein 2, isoform a protein.
Length = 366
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 392 VEEQRIRVMEGSWSPV--SVIREIVESGVQEDPFYVMDLGEV 511
+EE + M + PV S I+E G + D FYV+D G V
Sbjct: 126 LEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVIDKGTV 167
>U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase
protein 2, isoform c protein.
Length = 376
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 392 VEEQRIRVMEGSWSPV--SVIREIVESGVQEDPFYVMDLGEV 511
+EE + M + PV S I+E G + D FYV+D G V
Sbjct: 136 LEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVIDKGTV 177
>J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein (
C.elegans cAMP-dependentprotein kinase subunit R mRNA,
complete cds. ).
Length = 376
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 392 VEEQRIRVMEGSWSPV--SVIREIVESGVQEDPFYVMDLGEV 511
+EE + M + PV S I+E G + D FYV+D G V
Sbjct: 136 LEEDEQKTMYDAMFPVEKSAGETIIEQGEEGDNFYVIDKGTV 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,199,238
Number of Sequences: 27780
Number of extensions: 291280
Number of successful extensions: 988
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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