Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6b02
(622 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001627-1|AAH01627.1| 578|Homo sapiens 2-hydroxyacyl-CoA lyase... 193 4e-49
AJ131753-1|CAB60200.1| 578|Homo sapiens 2-hydroxyphytanoyl-CoA ... 190 3e-48
AK125241-1|BAC86096.1| 569|Homo sapiens protein ( Homo sapiens ... 171 2e-42
BC007440-1|AAH07440.1| 119|Homo sapiens HACL1 protein protein. 146 6e-35
U61263-1|AAC50934.1| 632|Homo sapiens acetolactate synthase hom... 68 2e-11
BC126913-1|AAI26914.1| 241|Homo sapiens ILVBL protein protein. 68 2e-11
BC011761-1|AAH11761.1| 632|Homo sapiens ilvB (bacterial acetola... 68 2e-11
BC011722-1|AAH11722.1| 632|Homo sapiens ilvB (bacterial acetola... 68 2e-11
AC003956-1|AAB94632.1| 632|Homo sapiens acetolactate synthase p... 68 2e-11
AB209065-1|BAD92302.1| 427|Homo sapiens ilvB (bacterial acetola... 68 2e-11
BC000109-1|AAH00109.1| 224|Homo sapiens ilvB (bacterial acetola... 62 1e-09
>BC001627-1|AAH01627.1| 578|Homo sapiens 2-hydroxyacyl-CoA lyase 1
protein.
Length = 578
Score = 193 bits (471), Expect = 4e-49
Identities = 84/130 (64%), Positives = 105/130 (80%)
Frame = +2
Query: 221 IDGNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYL 400
+ G ++A++LK Q VEY+FGIVGIPV E A+A Q G+KYIGMRNEQAACYAA A GYL
Sbjct: 14 VSGAKVIAQALKTQDVEYIFGIVGIPVTEIAIAAQQLGIKYIGMRNEQAACYAASAIGYL 73
Query: 401 TGKPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRM 580
T +PGVCLVVSGPGL+H +GGMANA +NCWPL+VI GS + E +G FQE+PQV++ R+
Sbjct: 74 TSRPGVCLVVSGPGLIHALGGMANANMNCWPLLVIGGSSERNQETMGAFQEFPQVEACRL 133
Query: 581 YCKYAARPPS 610
Y K++ARP S
Sbjct: 134 YTKFSARPSS 143
>AJ131753-1|CAB60200.1| 578|Homo sapiens 2-hydroxyphytanoyl-CoA
lyase protein.
Length = 578
Score = 190 bits (463), Expect = 3e-48
Identities = 83/130 (63%), Positives = 104/130 (80%)
Frame = +2
Query: 221 IDGNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYL 400
+ G ++A++LK Q VEY+FGIVGIPV E A+A Q G+KYIGMRNEQAACYAA A GYL
Sbjct: 14 VSGAKVIAQALKTQDVEYIFGIVGIPVTEIAIAAQQLGIKYIGMRNEQAACYAASAIGYL 73
Query: 401 TGKPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRM 580
T +PGVCLVVSGPGL+H +GGMANA +NCWPL+VI GS + E +G FQE+PQV++ R+
Sbjct: 74 TSRPGVCLVVSGPGLIHALGGMANANMNCWPLLVIGGSSERNQETMGAFQEFPQVEACRL 133
Query: 581 YCKYAARPPS 610
Y K++AR S
Sbjct: 134 YTKFSARXSS 143
>AK125241-1|BAC86096.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ43251 fis, clone HEART2006131, weakly similar
to Mus musculus 2-hydroxyphytanoyl-CoA lyase
(Hpcl-pending). ).
Length = 569
Score = 171 bits (416), Expect = 2e-42
Identities = 70/128 (54%), Positives = 100/128 (78%)
Frame = +2
Query: 227 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 406
G ++A++LK QGV+ +FGIVGIPV+E A A +AG+++IG RNEQ+A YAA GYL+G
Sbjct: 8 GADLIAQTLKNQGVQVIFGIVGIPVVEVAEACVAAGIRFIGFRNEQSAAYAASIYGYLSG 67
Query: 407 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 586
+PGVCL V GPG++H + G+ N+++NCWPL++++GSC D +G FQE QV+++R YC
Sbjct: 68 RPGVCLSVGGPGVVHALAGLLNSKINCWPLILLSGSCETDQTDMGAFQELDQVEAARQYC 127
Query: 587 KYAARPPS 610
KY+ARP S
Sbjct: 128 KYSARPAS 135
>BC007440-1|AAH07440.1| 119|Homo sapiens HACL1 protein protein.
Length = 119
Score = 146 bits (354), Expect = 6e-35
Identities = 63/90 (70%), Positives = 75/90 (83%)
Frame = +2
Query: 221 IDGNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYL 400
+ G ++A++LK Q VEY+FGIVGIPV E A+A Q G+KYIGMRNEQAACYAA A GYL
Sbjct: 14 VSGAKVIAQALKTQDVEYIFGIVGIPVTEIAIAAQQLGIKYIGMRNEQAACYAASAIGYL 73
Query: 401 TGKPGVCLVVSGPGLLHCIGGMANAQVNCW 490
T +PGVCLVVSGPGL+H +GGMANA +NCW
Sbjct: 74 TSRPGVCLVVSGPGLIHALGGMANANMNCW 103
>U61263-1|AAC50934.1| 632|Homo sapiens acetolactate synthase
homolog protein.
Length = 632
Score = 68.1 bits (159), Expect = 2e-11
Identities = 36/122 (29%), Positives = 63/122 (51%)
Frame = +2
Query: 227 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 406
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 54 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 113
Query: 407 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 586
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R C
Sbjct: 114 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFRPLC 173
Query: 587 KY 592
K+
Sbjct: 174 KF 175
>BC126913-1|AAI26914.1| 241|Homo sapiens ILVBL protein protein.
Length = 241
Score = 68.1 bits (159), Expect = 2e-11
Identities = 36/122 (29%), Positives = 63/122 (51%)
Frame = +2
Query: 227 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 406
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 18 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 77
Query: 407 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 586
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R C
Sbjct: 78 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFRPLC 137
Query: 587 KY 592
K+
Sbjct: 138 KF 139
>BC011761-1|AAH11761.1| 632|Homo sapiens ilvB (bacterial
acetolactate synthase)-like protein.
Length = 632
Score = 68.1 bits (159), Expect = 2e-11
Identities = 36/122 (29%), Positives = 63/122 (51%)
Frame = +2
Query: 227 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 406
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 54 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 113
Query: 407 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 586
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R C
Sbjct: 114 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFRPLC 173
Query: 587 KY 592
K+
Sbjct: 174 KF 175
>BC011722-1|AAH11722.1| 632|Homo sapiens ilvB (bacterial
acetolactate synthase)-like protein.
Length = 632
Score = 68.1 bits (159), Expect = 2e-11
Identities = 36/122 (29%), Positives = 63/122 (51%)
Frame = +2
Query: 227 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 406
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 54 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 113
Query: 407 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 586
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R C
Sbjct: 114 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFRPLC 173
Query: 587 KY 592
K+
Sbjct: 174 KF 175
>AC003956-1|AAB94632.1| 632|Homo sapiens acetolactate synthase
protein.
Length = 632
Score = 68.1 bits (159), Expect = 2e-11
Identities = 36/122 (29%), Positives = 63/122 (51%)
Frame = +2
Query: 227 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 406
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 54 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 113
Query: 407 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 586
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R C
Sbjct: 114 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFRPLC 173
Query: 587 KY 592
K+
Sbjct: 174 KF 175
>AB209065-1|BAD92302.1| 427|Homo sapiens ilvB (bacterial
acetolactate synthase)-like isoform 1 variant protein.
Length = 427
Score = 68.1 bits (159), Expect = 2e-11
Identities = 36/122 (29%), Positives = 63/122 (51%)
Frame = +2
Query: 227 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 406
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 19 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 78
Query: 407 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 586
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R C
Sbjct: 79 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFRPLC 138
Query: 587 KY 592
K+
Sbjct: 139 KF 140
>BC000109-1|AAH00109.1| 224|Homo sapiens ilvB (bacterial
acetolactate synthase)-like protein.
Length = 224
Score = 62.5 bits (145), Expect = 1e-09
Identities = 34/117 (29%), Positives = 60/117 (51%)
Frame = +2
Query: 227 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 406
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 54 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 113
Query: 407 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSR 577
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R
Sbjct: 114 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFR 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,077,995
Number of Sequences: 237096
Number of extensions: 2307603
Number of successful extensions: 3923
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3854
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -