Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6b01
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 303 8e-83
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 303 8e-83
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 303 1e-82
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 303 1e-82
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 303 1e-82
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 300 7e-82
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 300 7e-82
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 300 7e-82
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 297 5e-81
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 28 5.8
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 28 5.8
U22832-1|AAA64507.1| 293|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF045642-5|AAC02582.1| 374|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 303 bits (744), Expect = 8e-83
Identities = 152/217 (70%), Positives = 172/217 (79%), Gaps = 7/217 (3%)
Frame = +1
Query: 85 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 261
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 262 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 426
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 427 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 603
VIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 604 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAA 714
DGPSGKLWRDGRGA QNIIPASTGAA
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAA 220
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 303 bits (744), Expect = 8e-83
Identities = 152/217 (70%), Positives = 172/217 (79%), Gaps = 7/217 (3%)
Frame = +1
Query: 85 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 261
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 262 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 426
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 427 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 603
VIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 604 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAA 714
DGPSGKLWRDGRGA QNIIPASTGAA
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAA 220
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 303 bits (743), Expect = 1e-82
Identities = 151/217 (69%), Positives = 172/217 (79%), Gaps = 7/217 (3%)
Frame = +1
Query: 85 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 261
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 262 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 426
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 427 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 603
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 604 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAA 714
DGPSGKLWRDGRGA QNIIPASTGAA
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAA 220
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 303 bits (743), Expect = 1e-82
Identities = 151/217 (69%), Positives = 172/217 (79%), Gaps = 7/217 (3%)
Frame = +1
Query: 85 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 261
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 262 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 426
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 427 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 603
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 604 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAA 714
DGPSGKLWRDGRGA QNIIPASTGAA
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAA 220
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 303 bits (743), Expect = 1e-82
Identities = 151/217 (69%), Positives = 172/217 (79%), Gaps = 7/217 (3%)
Frame = +1
Query: 85 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 261
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 262 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 426
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 427 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 603
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 604 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAA 714
DGPSGKLWRDGRGA QNIIPASTGAA
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAA 220
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 300 bits (736), Expect = 7e-82
Identities = 149/215 (69%), Positives = 173/215 (80%), Gaps = 7/215 (3%)
Frame = +1
Query: 91 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 267
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 268 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 432
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 433 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXX 609
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 610 XXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAA 714
DGPSGKLWRDGRGA QNIIPASTGAA
Sbjct: 186 AVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAA 220
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 300 bits (736), Expect = 7e-82
Identities = 149/215 (69%), Positives = 173/215 (80%), Gaps = 7/215 (3%)
Frame = +1
Query: 91 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 267
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 268 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 432
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 433 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXX 609
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 610 XXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAA 714
DGPSGKLWRDGRGA QNIIPASTGAA
Sbjct: 186 AVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAA 220
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 300 bits (736), Expect = 7e-82
Identities = 149/215 (69%), Positives = 173/215 (80%), Gaps = 7/215 (3%)
Frame = +1
Query: 91 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 267
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 268 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 432
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 433 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXX 609
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 610 XXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAA 714
DGPSGKLWRDGRGA QNIIPASTGAA
Sbjct: 186 AVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAA 220
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 297 bits (729), Expect = 5e-81
Identities = 148/215 (68%), Positives = 172/215 (80%), Gaps = 7/215 (3%)
Frame = +1
Query: 91 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 267
+GINGFGRIGRLVLRA++EK + V A+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 268 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 432
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 433 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXX 609
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 610 XXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAA 714
DGPSGKLWRDGRGA QNIIPASTGAA
Sbjct: 186 AVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAA 220
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 29.9 bits (64), Expect = 1.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 96 NQWIWPHWPFGAP 134
N+ +WPHW FG+P
Sbjct: 426 NEQVWPHWRFGSP 438
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 188 PMKGSFIATT*APFSIEARSTKRP-MRPNPLIPIFDMLSASYR 63
PM S T + S+E+ TKR R NP+ P FD++ + R
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVIDGTAR 211
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 188 PMKGSFIATT*APFSIEARSTKRP-MRPNPLIPIFDMLSASYR 63
PM S T + S+E+ TKR R NP+ P FD++ + R
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVIDGTAR 211
>U22832-1|AAA64507.1| 293|Caenorhabditis elegans Hypothetical
protein C09F5.2 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 154 AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDGFLVVNGN 288
A +V + F+ Y+++ + + GRFK V+ FL V N
Sbjct: 235 AMLVPVGVVFVVFSYLIHKNRVSHSLGRFKHKVDTMKQFLDVEAN 279
>AF045642-5|AAC02582.1| 374|Caenorhabditis elegans Hypothetical
protein C17H12.3 protein.
Length = 374
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +2
Query: 35 WWWSVIQQIFYNLPITCQKLESMDLAALAVWCSVLLLKRELK 160
+WW ++QQ + + C+ +E+ W + K+E+K
Sbjct: 165 FWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEVK 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,027,498
Number of Sequences: 27780
Number of extensions: 370146
Number of successful extensions: 932
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -