Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6a23
(708 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein. 81 3e-15
M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl ... 81 5e-15
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 81 5e-15
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 81 5e-15
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 81 5e-15
Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate sy... 72 2e-12
BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein. 53 1e-06
BC031068-1|AAH31068.1| 429|Homo sapiens AADAT protein protein. 32 1.7
AF481738-1|AAM09683.1| 425|Homo sapiens alpha-aminoadipate amin... 32 1.7
AF097994-1|AAF04623.1| 425|Homo sapiens L-kynurenine/alpha-amin... 32 1.7
AC084866-3|AAY41030.1| 425|Homo sapiens unknown protein. 32 1.7
AB051466-1|BAB21770.1| 1536|Homo sapiens KIAA1679 protein protein. 31 5.3
BC067768-1|AAH67768.1| 300|Homo sapiens GGPS1 protein protein. 30 7.1
BC005252-1|AAH05252.1| 300|Homo sapiens geranylgeranyl diphosph... 30 7.1
AL391994-8|CAI13753.1| 300|Homo sapiens geranylgeranyl diphosph... 30 7.1
AK094707-1|BAC04403.1| 157|Homo sapiens protein ( Homo sapiens ... 30 7.1
AF125394-1|AAD43050.1| 300|Homo sapiens gerannylgeranyl pyropho... 30 7.1
AF057698-1|AAG45581.1| 300|Homo sapiens geranylgeranyl pyrophos... 30 7.1
AB019036-1|BAA77251.1| 300|Homo sapiens geranylgeranyl pyrophos... 30 7.1
AB017971-1|BAA75909.1| 300|Homo sapiens geranylgeranyl diphosph... 30 7.1
AB016043-1|BAA76511.1| 300|Homo sapiens GGPP synthase protein. 30 7.1
>J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein.
Length = 353
Score = 81.4 bits (192), Expect = 3e-15
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = +1
Query: 367 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 543
V + ++F+ F IVR LTE H ++ +A L ++L+YN GK NRGL ++A+
Sbjct: 9 VYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 68
Query: 544 KMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRP 705
+ L + +++ A +GWCVE+ L+ +DIM+ + RRG CW+++P
Sbjct: 69 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQTCWYQKP 122
>M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl
pyrophosphate synthetase mRNA (hpt807), 3' end. ).
Length = 346
Score = 80.6 bits (190), Expect = 5e-15
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = +1
Query: 367 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 543
V + ++F+ F IVR LTE H ++ +A L ++L+YN GK NRGL ++A+
Sbjct: 2 VYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 61
Query: 544 KMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRP 705
+ L + +++ A +GWCVE+ L+ +DIM+ + RRG CW+++P
Sbjct: 62 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKP 115
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 80.6 bits (190), Expect = 5e-15
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = +1
Query: 367 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 543
V + ++F+ F IVR LTE H ++ +A L ++L+YN GK NRGL ++A+
Sbjct: 76 VYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 135
Query: 544 KMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRP 705
+ L + +++ A +GWCVE+ L+ +DIM+ + RRG CW+++P
Sbjct: 136 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKP 189
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 80.6 bits (190), Expect = 5e-15
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = +1
Query: 367 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 543
V + ++F+ F IVR LTE H ++ +A L ++L+YN GK NRGL ++A+
Sbjct: 75 VYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 134
Query: 544 KMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRP 705
+ L + +++ A +GWCVE+ L+ +DIM+ + RRG CW+++P
Sbjct: 135 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKP 188
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 80.6 bits (190), Expect = 5e-15
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = +1
Query: 367 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 543
V + ++F+ F IVR LTE H ++ +A L ++L+YN GK NRGL ++A+
Sbjct: 75 VYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 134
Query: 544 KMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRP 705
+ L + +++ A +GWCVE+ L+ +DIM+ + RRG CW+++P
Sbjct: 135 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKP 188
>Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate
synthetase like-4 protein.
Length = 348
Score = 72.1 bits (169), Expect = 2e-12
Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +1
Query: 367 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 543
V + ++F+ F IVR TE H ++ +A L ++L+YN GK NR L +A+
Sbjct: 4 VYAQEKQDFVQHFSQIVRVPTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRRLTVAVAF 63
Query: 544 KMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRP 705
+ L +++ A +GWCVE+ L+ +DIM+ + RRG CW+++P
Sbjct: 64 RELVDPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKP 117
>BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein.
Length = 298
Score = 52.8 bits (121), Expect = 1e-06
Identities = 23/87 (26%), Positives = 49/87 (56%)
Frame = +1
Query: 442 HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKMLEKKENLTPENILLANVMGWCVEM 621
H + +A+ L ++L+YN GK +RGL ++A++ L + L +++ A +GW ++
Sbjct: 3 HPETGDATARLKEVLEYNAIGGKYHRGLMVLVAFRELVEPRKLDADSLQWAPTVGWYAQL 62
Query: 622 FHTHQLLLNDIMEGTTMRRGVPCWHRR 702
L+ +DIM+ + +G W+++
Sbjct: 63 LQAFFLVADDIMDSSLTCQGQISWYQK 89
>BC031068-1|AAH31068.1| 429|Homo sapiens AADAT protein protein.
Length = 429
Score = 32.3 bits (70), Expect = 1.7
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 271 TGPKRLLKLQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHID 450
TGPK L++ H +STL P + + FMA D V D K
Sbjct: 279 TGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMA-HVDRVIDFYSNQKDAI 337
Query: 451 VPEASKWLAKLLQYNVP 501
+ A KWL L +++VP
Sbjct: 338 LAAADKWLTGLAEWHVP 354
>AF481738-1|AAM09683.1| 425|Homo sapiens alpha-aminoadipate
aminotransferase protein.
Length = 425
Score = 32.3 bits (70), Expect = 1.7
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 271 TGPKRLLKLQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHID 450
TGPK L++ H +STL P + + FMA D V D K
Sbjct: 275 TGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMA-HVDRVIDFYSNQKDAI 333
Query: 451 VPEASKWLAKLLQYNVP 501
+ A KWL L +++VP
Sbjct: 334 LAAADKWLTGLAEWHVP 350
>AF097994-1|AAF04623.1| 425|Homo sapiens
L-kynurenine/alpha-aminoadipate aminotransferase
protein.
Length = 425
Score = 32.3 bits (70), Expect = 1.7
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 271 TGPKRLLKLQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHID 450
TGPK L++ H +STL P + + FMA D V D K
Sbjct: 275 TGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMA-HVDRVIDFYSNQKDAI 333
Query: 451 VPEASKWLAKLLQYNVP 501
+ A KWL L +++VP
Sbjct: 334 LAAADKWLTGLAEWHVP 350
>AC084866-3|AAY41030.1| 425|Homo sapiens unknown protein.
Length = 425
Score = 32.3 bits (70), Expect = 1.7
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 271 TGPKRLLKLQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHID 450
TGPK L++ H +STL P + + FMA D V D K
Sbjct: 275 TGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMA-HVDRVIDFYSNQKDAI 333
Query: 451 VPEASKWLAKLLQYNVP 501
+ A KWL L +++VP
Sbjct: 334 LAAADKWLTGLAEWHVP 350
>AB051466-1|BAB21770.1| 1536|Homo sapiens KIAA1679 protein protein.
Length = 1536
Score = 30.7 bits (66), Expect = 5.3
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 365 PFP-RTSPGSSWLSFRTSSGISLRLASTLMFRKPANGWLSC 484
PF + S SSW S +S GI +R+ S + KP NG C
Sbjct: 926 PFDCKLSDWSSWGSCSSSCGIGVRIRSKWLKEKPYNGGRPC 966
>BC067768-1|AAH67768.1| 300|Homo sapiens GGPS1 protein protein.
Length = 300
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 616 EMFHTHQLLLNDIMEGTTMRRGVPCWH 696
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>BC005252-1|AAH05252.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase 1 protein.
Length = 300
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 616 EMFHTHQLLLNDIMEGTTMRRGVPCWH 696
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>AL391994-8|CAI13753.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase 1 protein.
Length = 300
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 616 EMFHTHQLLLNDIMEGTTMRRGVPCWH 696
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>AK094707-1|BAC04403.1| 157|Homo sapiens protein ( Homo sapiens
cDNA FLJ37388 fis, clone BRAMY2026713. ).
Length = 157
Score = 30.3 bits (65), Expect = 7.1
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -3
Query: 355 G*PSAFPEESGSTGICDIFAASAVSSVRFPQPVVTCSPTGPASGPWHQN 209
G P P SG C +F S + S P + CS PASGPW Q+
Sbjct: 41 GPPFPHPSISG-VSFCLLFPPSGLKS---PDLFLKCSRLLPASGPWAQS 85
>AF125394-1|AAD43050.1| 300|Homo sapiens gerannylgeranyl
pyrophosphate synthase protein.
Length = 300
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 616 EMFHTHQLLLNDIMEGTTMRRGVPCWH 696
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>AF057698-1|AAG45581.1| 300|Homo sapiens geranylgeranyl
pyrophosphate synthetase protein.
Length = 300
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 616 EMFHTHQLLLNDIMEGTTMRRGVPCWH 696
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>AB019036-1|BAA77251.1| 300|Homo sapiens geranylgeranyl
pyrophosphate synthase protein.
Length = 300
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 616 EMFHTHQLLLNDIMEGTTMRRGVPCWH 696
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>AB017971-1|BAA75909.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase protein.
Length = 300
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 616 EMFHTHQLLLNDIMEGTTMRRGVPCWH 696
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>AB016043-1|BAA76511.1| 300|Homo sapiens GGPP synthase protein.
Length = 300
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 616 EMFHTHQLLLNDIMEGTTMRRGVPCWH 696
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,011,605
Number of Sequences: 237096
Number of extensions: 2793125
Number of successful extensions: 7875
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7870
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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