Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6a18
(671 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 33 0.050
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 31 0.20
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi... 30 0.26
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 28 1.1
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.4
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 28 1.4
SPAC4H3.04c |||UPF0103 family|Schizosaccharomyces pombe|chr 1|||... 28 1.4
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.5
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 26 4.3
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 26 4.3
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 5.7
SPBC725.14 |arg6||acetylglutamate synthase Arg6 |Schizosaccharom... 26 5.7
SPBC3E7.12c |chr1|cfh4|chitin synthase regulatory factor |Schizo... 25 7.5
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 7.5
SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces ... 25 9.9
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 25 9.9
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 9.9
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 32.7 bits (71), Expect = 0.050
Identities = 17/71 (23%), Positives = 38/71 (53%)
Frame = +2
Query: 326 NADNVITSDYNSNCRSKFDSRIRTIQNDARRAASFSGENHHKFLLGHMIVMRMHLNKSES 505
N ++I SDY S+ +SKF+S+ + + + + S + ++ L ++ HLN + S
Sbjct: 774 NDADIILSDYISDQKSKFESKQQDLIANIGKIVSNFLQEQNESLYTKADILHSHLNDTNS 833
Query: 506 LVKKCTKAVRD 538
++K + + +
Sbjct: 834 NIRKANEIMNN 844
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 30.7 bits (66), Expect = 0.20
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = -3
Query: 276 SSSPAIAVYSVKSSRASAFADINSSVSSGVYRFSMSASSSRVWLL*SVTSTHRES*ERTI 97
SSS + + S SS +S+ + +SS SS S S+SSS V + S +S+H S +
Sbjct: 167 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSS 226
Query: 96 CPHVSSR 76
SSR
Sbjct: 227 SSSSSSR 233
>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 865
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 149 QTLDEDADIEKRYTPELTEELMSAKADALLLFTEYTAIAGEELK-SFLMNVTAYSDDAIR 325
+ + ++ D+E Y E T+EL+ +K+ +L+ AI+ ++ S + + +DD I
Sbjct: 191 RVIQKEPDLESLYI-EKTDELLHSKSHGVLMAALAFAISACKINPSLISRFESQADDLIY 249
Query: 326 NADNVITSDYNS 361
+ TS Y+S
Sbjct: 250 RIRQLSTSTYSS 261
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -3
Query: 315 SSE*AVTFIRKDFSSSPAIAVYSVKSSRASAFADINSSVSSGVYRFS 175
SSE A + + K S+ + +S++ + FAD S+ S RFS
Sbjct: 285 SSEKAASILEKSISAIQTVIFHSMQDTEYRYFADACSTSSKSFLRFS 331
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.4
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = -3
Query: 339 TLSAFRMASSE*AVTFIRKDFSSSPAIAVYSVKSSRASAFADINSSVSSGVYRFSMSASS 160
TLS+ M+SS +F SSS I+ S S +S + +SS SS + ++S+SS
Sbjct: 320 TLSSSSMSSSS---SFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSS 376
Query: 159 S 157
S
Sbjct: 377 S 377
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +2
Query: 497 SESLVKKCTKAVRDCGISCETIPRVKRWRRQALEEIHRVREDMQHSRRSYKDLVL 661
S+ ++ K ++ D G++ VKR + + E + ++E +H + YK+++L
Sbjct: 343 SKEMLTKLGESNVDDGMAASRYDTVKREKERLSEHLKSLQEQYEHIQSVYKNVLL 397
>SPAC4H3.04c |||UPF0103 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 221 SLTSTPRSALECTASLCQRLRPGSGCFDRSRPPIENPENELSVR 90
S+ STP L+ LCQ+L FD ++ E+ L ++
Sbjct: 91 SICSTPLGDLKVDEDLCQKLVASDNSFDSMTLDVDESEHSLEMQ 134
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -3
Query: 282 DFSSSPAIAVYSVKSSRASAFADINSSVSSGVYRFSMSASS 160
D SSS + A SV S +SA + +++S SS S SASS
Sbjct: 251 DDSSSASSATSSVSSVVSSASSALSASASSASASVSSSASS 291
Score = 25.4 bits (53), Expect = 7.5
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -3
Query: 276 SSSPAIAVYSVKSSRASAFADINSSVSSGVYRFSMSASSS 157
SSS + + S KSS +S+ + +SS SS + S S+SSS
Sbjct: 166 SSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSS 205
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 128 DVTDQSNQTLDEDADIEKRYTPELTEELMSAKADAL 235
D ++ +QT+DEDA K EL E ++ K L
Sbjct: 141 DEEEEDDQTMDEDAFERKSMQGELKERNLTDKTSTL 176
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 26.2 bits (55), Expect = 4.3
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -3
Query: 276 SSSPAIAVYSVKSSRASAFADINSSVSSGVYRFSMSASSSRVWLL*SVTSTHRES*ER-T 100
SSS A + SS +S+ + +SS SS S S SSSR T++H+ S R T
Sbjct: 135 SSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTS--HRTTSHKSSSYRPT 192
Query: 99 ICPHVSSRRHEI 64
+ P+ + + I
Sbjct: 193 VFPYTTISHYNI 204
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 25.8 bits (54), Expect = 5.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 588 KLWRRSTASGRTCSTPAAPT 647
K WR S +S CS+P PT
Sbjct: 110 KRWRSSKSSSSQCSSPFLPT 129
>SPBC725.14 |arg6||acetylglutamate synthase Arg6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 83 LTCGQIVRSQDSLWVDVTDQSNQTLDEDADIEK 181
LT G + S + LWV + D +TLD DA +++
Sbjct: 342 LTDGSV--SWERLWVLINDSFKRTLDMDAYLDR 372
>SPBC3E7.12c |chr1|cfh4|chitin synthase regulatory factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 456
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = -3
Query: 279 FSSSPAIAVYSVKSSRASAFADINSSVSSGVYRFSMSAS 163
F ++P+IA +S ++ S+ + +SS S+ + RF+ AS
Sbjct: 101 FETAPSIASFSNSAADVSSHSRSSSSWSAKLSRFTKHAS 139
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.4 bits (53), Expect = 7.5
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 276 SSSPAIAVYSVKSSRASAFADINSSVSSGVYRFSM-SASSSRVW 148
SSSP ++ YS S +S F + S S RFS S SS V+
Sbjct: 3549 SSSPVLSGYSESSFDSSVFVPSSVSRSFSYSRFSSGSLDSSSVF 3592
>SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 531 TALVHFFTRDSLLFKCILITIMWPSRNL 448
TA +HF++ LLF CI I + S +L
Sbjct: 3 TASIHFWSTLVLLFSCIGSVIAYSSTDL 30
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 569 LEVLSRKRCRNLSPLWCTSSPGIHSYSNAFSSRS 468
++VL+ R NL+ +WC S S + S R+
Sbjct: 224 MQVLNEYRVSNLNEIWCNSFSIEKSLHDTLSQRT 257
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +2
Query: 491 NKSESLVKKCTKAVRDCGISCETIPRVKRWRRQALEEIHRVREDMQHSRRSYKDLVLH 664
NK+ S +++ ++R C+T+ K + EE ++ E+++H+ +Y D ++H
Sbjct: 263 NKTVSTLRQTENSLR---AECKTLQE-KLEKCAINEEDSKLLEELKHNVANYSDAIVH 316
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,684,273
Number of Sequences: 5004
Number of extensions: 53749
Number of successful extensions: 246
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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