Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6a18
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC071827-1|AAH71827.1| 223|Homo sapiens synovial sarcoma, X bre... 31 5.0
BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein. 31 5.0
BC002818-1|AAH02818.1| 223|Homo sapiens synovial sarcoma, X bre... 31 5.0
AL450023-16|CAI41157.1| 223|Homo sapiens synovial sarcoma, X br... 31 5.0
AL450023-10|CAI41151.1| 223|Homo sapiens synovial sarcoma, X br... 31 5.0
AL445236-9|CAI41623.1| 223|Homo sapiens synovial sarcoma, X bre... 31 5.0
AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein ... 31 5.0
AF190791-1|AAF44724.1| 113|Homo sapiens SSX2 protein. 31 5.0
AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein. 31 5.0
AB011541-1|BAA32469.2| 2785|Homo sapiens MEGF8 protein. 31 5.0
AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein. 31 5.0
DQ120629-1|ABB92415.1| 1185|Homo sapiens KIF4B protein. 30 6.6
X79440-1|CAA55956.1| 604|Homo sapiens malate dehydrogenase (oxa... 30 8.7
BC022472-1|AAH22472.1| 604|Homo sapiens malic enzyme 3, NADP(+)... 30 8.7
>BC071827-1|AAH71827.1| 223|Homo sapiens synovial sarcoma, X
breakpoint 2 protein.
Length = 223
Score = 30.7 bits (66), Expect = 5.0
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = -1
Query: 662 EALGPCRSGGSAACPPGRGGSPPELGVSSASLEVLSRKRCRNLSPLWCTSSPGIHSYSNA 483
EA GP ++ G CPPG+ + ++ S + E ++ R + W SS H+
Sbjct: 128 EASGP-QNDGKELCPPGKPTTSEKIHERSGNREAQEKEERRGTAHRW--SSQNTHNIGRF 184
Query: 482 FSSRSCGRV 456
S S G V
Sbjct: 185 SLSTSMGAV 193
>BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein.
Length = 1235
Score = 30.7 bits (66), Expect = 5.0
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = +1
Query: 385 PHSHDPE*RPPRGQLQRREPSQVPTRPHDRDENAFE*E*IPGEEVHQSGERL-RHLLRDN 561
P S P PP QLQ QV P + + +P + H S + L + L N
Sbjct: 336 PLSTQPPQGPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQPLSAYN 395
Query: 562 TSSEALETXXXXXXXXXXXXHAALPPLLQGPSAS 663
+SS +L + A P + PSAS
Sbjct: 396 SSSLSLNSLSSSRSSTPAKTQPAPPHISHHPSAS 429
>BC002818-1|AAH02818.1| 223|Homo sapiens synovial sarcoma, X
breakpoint 2 protein.
Length = 223
Score = 30.7 bits (66), Expect = 5.0
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = -1
Query: 662 EALGPCRSGGSAACPPGRGGSPPELGVSSASLEVLSRKRCRNLSPLWCTSSPGIHSYSNA 483
EA GP ++ G CPPG+ + ++ S + E ++ R + W SS H+
Sbjct: 128 EASGP-QNDGKELCPPGKPTTSEKIHERSGNREAQEKEERRGTAHRW--SSQNTHNIGRF 184
Query: 482 FSSRSCGRV 456
S S G V
Sbjct: 185 SLSTSMGAV 193
>AL450023-16|CAI41157.1| 223|Homo sapiens synovial sarcoma, X
breakpoint 2B protein.
Length = 223
Score = 30.7 bits (66), Expect = 5.0
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = -1
Query: 662 EALGPCRSGGSAACPPGRGGSPPELGVSSASLEVLSRKRCRNLSPLWCTSSPGIHSYSNA 483
EA GP ++ G CPPG+ + ++ S + E ++ R + W SS H+
Sbjct: 128 EASGP-QNDGKELCPPGKPTTSEKIHERSGNREAQEKEERRGTAHRW--SSQNTHNIGRF 184
Query: 482 FSSRSCGRV 456
S S G V
Sbjct: 185 SLSTSMGAV 193
>AL450023-10|CAI41151.1| 223|Homo sapiens synovial sarcoma, X
breakpoint 2 protein.
Length = 223
Score = 30.7 bits (66), Expect = 5.0
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = -1
Query: 662 EALGPCRSGGSAACPPGRGGSPPELGVSSASLEVLSRKRCRNLSPLWCTSSPGIHSYSNA 483
EA GP ++ G CPPG+ + ++ S + E ++ R + W SS H+
Sbjct: 128 EASGP-QNDGKELCPPGKPTTSEKIHERSGNREAQEKEERRGTAHRW--SSQNTHNIGRF 184
Query: 482 FSSRSCGRV 456
S S G V
Sbjct: 185 SLSTSMGAV 193
>AL445236-9|CAI41623.1| 223|Homo sapiens synovial sarcoma, X
breakpoint 2B protein.
Length = 223
Score = 30.7 bits (66), Expect = 5.0
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = -1
Query: 662 EALGPCRSGGSAACPPGRGGSPPELGVSSASLEVLSRKRCRNLSPLWCTSSPGIHSYSNA 483
EA GP ++ G CPPG+ + ++ S + E ++ R + W SS H+
Sbjct: 128 EASGP-QNDGKELCPPGKPTTSEKIHERSGNREAQEKEERRGTAHRW--SSQNTHNIGRF 184
Query: 482 FSSRSCGRV 456
S S G V
Sbjct: 185 SLSTSMGAV 193
>AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein 1
protein.
Length = 1259
Score = 30.7 bits (66), Expect = 5.0
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = +1
Query: 385 PHSHDPE*RPPRGQLQRREPSQVPTRPHDRDENAFE*E*IPGEEVHQSGERL-RHLLRDN 561
P S P PP QLQ QV P + + +P + H S + L + L N
Sbjct: 336 PLSTQPPQGPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQPLSAYN 395
Query: 562 TSSEALETXXXXXXXXXXXXHAALPPLLQGPSAS 663
+SS +L + A P + PSAS
Sbjct: 396 SSSLSLNSLSSSRSSTPAKTQPAPPHISHHPSAS 429
>AF190791-1|AAF44724.1| 113|Homo sapiens SSX2 protein.
Length = 113
Score = 30.7 bits (66), Expect = 5.0
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = -1
Query: 662 EALGPCRSGGSAACPPGRGGSPPELGVSSASLEVLSRKRCRNLSPLWCTSSPGIHSYSNA 483
EA GP ++ G CPPG+ + ++ S + E ++ R + W SS H+
Sbjct: 18 EASGP-QNDGKELCPPGKPTTSEKIHERSGNREAQEKEERRGTAHRW--SSQNTHNIGRF 74
Query: 482 FSSRSCGRV 456
S S G V
Sbjct: 75 SLSTSMGAV 83
>AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein.
Length = 1011
Score = 30.7 bits (66), Expect = 5.0
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = +1
Query: 385 PHSHDPE*RPPRGQLQRREPSQVPTRPHDRDENAFE*E*IPGEEVHQSGERL-RHLLRDN 561
P S P PP QLQ QV P + + +P + H S + L + L N
Sbjct: 88 PLSTQPPQGPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQPLSAYN 147
Query: 562 TSSEALETXXXXXXXXXXXXHAALPPLLQGPSAS 663
+SS +L + A P + PSAS
Sbjct: 148 SSSLSLNSLSSSRSSTPAKTQPAPPHISHHPSAS 181
>AB011541-1|BAA32469.2| 2785|Homo sapiens MEGF8 protein.
Length = 2785
Score = 30.7 bits (66), Expect = 5.0
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -1
Query: 653 GPCRSGGSAACPPGRGGSPPELGVSSASLEVLSRKRCRNLSPLW-CTSSPG 504
G C+ G AC PG GG P+ G+ S S C SPL C PG
Sbjct: 157 GQCQPPGVCACEPGWGG--PDCGLQECSAYCGSHGTC--ASPLGPCRCEPG 203
>AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein.
Length = 1266
Score = 30.7 bits (66), Expect = 5.0
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = +1
Query: 385 PHSHDPE*RPPRGQLQRREPSQVPTRPHDRDENAFE*E*IPGEEVHQSGERL-RHLLRDN 561
P S P PP QLQ QV P + + +P + H S + L + L N
Sbjct: 367 PLSTQPPQGPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQPLSAYN 426
Query: 562 TSSEALETXXXXXXXXXXXXHAALPPLLQGPSAS 663
+SS +L + A P + PSAS
Sbjct: 427 SSSLSLNSLSSSRSSTPAKTQPAPPHISHHPSAS 460
>DQ120629-1|ABB92415.1| 1185|Homo sapiens KIF4B protein.
Length = 1185
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 518 CTKAVRDCGISCETIPRVKRWRRQALEEIHRVREDMQHSRRSYK 649
C K DCG+ C P R R+Q + + V E Q S S+K
Sbjct: 1101 CRKQKSDCGVDCSCDPTKCRNRQQGKDSLGTV-EQTQDSEGSFK 1143
>X79440-1|CAA55956.1| 604|Homo sapiens malate dehydrogenase
(oxaloacetate decarboxylating) (NADP+) protein.
Length = 604
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 212 STPRSALECTASLCQRLRPGSGCFDRSRP 126
S P S ECTA C R+ G G F P
Sbjct: 442 SNPTSKAECTAEKCYRVTEGRGIFASGSP 470
>BC022472-1|AAH22472.1| 604|Homo sapiens malic enzyme 3,
NADP(+)-dependent, mitochondrial protein.
Length = 604
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 212 STPRSALECTASLCQRLRPGSGCFDRSRP 126
S P S ECTA C R+ G G F P
Sbjct: 442 SNPTSKAECTAEKCYRVTEGRGIFASGSP 470
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,060,159
Number of Sequences: 237096
Number of extensions: 2119699
Number of successful extensions: 7965
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7936
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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