Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6a18
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 33 0.18
Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical p... 29 2.3
Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical p... 29 2.3
AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear recep... 29 2.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 25 3.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 25 3.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 25 3.6
U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo mitoc... 28 6.9
Z99281-2|CAB16506.2| 224|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z79759-8|CAE45097.1| 619|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 27 9.2
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 27 9.2
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 27 9.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 9.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 9.2
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 27 9.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 9.2
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +2
Query: 128 DVTDQSNQTLDEDADIEKRYTPELTEELMSAKADALLLFTEYTAIAGEELKSFLMNVTAY 307
D+ +Q+ + + + + K+ T + E DA Y AGE+ L + A+
Sbjct: 152 DLANQTGEEMSDAFESVKQLTSDTAENAKENAHDAADTAKSYKDKAGEKASGILDSFKAH 211
Query: 308 SDDAIRNADNVITSDYNS 361
+ DA + +N + YNS
Sbjct: 212 ASDAKDSVENKASDAYNS 229
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +2
Query: 128 DVTDQSNQTLDEDADIEKRYTPELTEELMSAKADALLLFTEYTAIAGEELKSFLMNVTAY 307
D+ +Q+ + + + + K+ T + E DA Y AGE+ L + A+
Sbjct: 152 DLANQTGEEMSDAFESVKQLTSDTAENAKENAHDAADTAKSYKDKAGEKASGILDSFKAH 211
Query: 308 SDDAIRNADNVITSDYNS 361
+ DA + +N + YNS
Sbjct: 212 ASDAKDSVENKASDAYNS 229
>Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical
protein F54D1.4 protein.
Length = 536
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 227 PPSLTSTPRSALECTASLCQRLRPGSGCFDRSRPPIE 117
P SL+S P+ LE T S+ + LRP D P+E
Sbjct: 466 PNSLSSFPKIPLEMTKSIEEFLRPNGMTTDEMNKPLE 502
>Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 491 NKSESLVKKCTKAVRDCGISCETIPRVKRWRRQALEEIHRVREDMQHSRRSYKDLVLHAR 670
N+ E + K A+ C+ I K EEI R+R+D++ + + Y + LH +
Sbjct: 242 NEFEDMTKTAASALEMLNYECDEIEADKGNEASLKEEISRIRDDIRKA-KDYLEQNLHVK 300
>Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 491 NKSESLVKKCTKAVRDCGISCETIPRVKRWRRQALEEIHRVREDMQHSRRSYKDLVLHAR 670
N+ E + K A+ C+ I K EEI R+R+D++ + + Y + LH +
Sbjct: 242 NEFEDMTKTAASALEMLNYECDEIEADKGNEASLKEEISRIRDDIRKA-KDYLEQNLHVK 300
>AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear receptor
NHR-7 protein.
Length = 536
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 227 PPSLTSTPRSALECTASLCQRLRPGSGCFDRSRPPIE 117
P SL+S P+ LE T S+ + LRP D P+E
Sbjct: 466 PNSLSSFPKIPLEMTKSIEEFLRPNGMTTDEMNKPLE 502
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 24.6 bits (51), Expect(2) = 3.6
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -1
Query: 620 PPGRGGSPPELGVSSASLEVLSRKRCRNLSP 528
PP GGSPP G S +++ SP
Sbjct: 335 PPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 365
Score = 22.6 bits (46), Expect(2) = 3.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 650 PCRSGGSAACPPGRGGSPP 594
P +GGS PP R GSPP
Sbjct: 303 PPPAGGSP--PPPRAGSPP 319
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 24.6 bits (51), Expect(2) = 3.6
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -1
Query: 620 PPGRGGSPPELGVSSASLEVLSRKRCRNLSP 528
PP GGSPP G S +++ SP
Sbjct: 320 PPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 350
Score = 22.6 bits (46), Expect(2) = 3.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 650 PCRSGGSAACPPGRGGSPP 594
P +GGS PP R GSPP
Sbjct: 288 PPPAGGSP--PPPRAGSPP 304
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 24.6 bits (51), Expect(2) = 3.6
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -1
Query: 620 PPGRGGSPPELGVSSASLEVLSRKRCRNLSP 528
PP GGSPP G S +++ SP
Sbjct: 314 PPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 344
Score = 22.6 bits (46), Expect(2) = 3.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 650 PCRSGGSAACPPGRGGSPP 594
P +GGS PP R GSPP
Sbjct: 282 PPPAGGSP--PPPRAGSPP 298
>U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo
mitochondrial fusion protein)related protein 1 protein.
Length = 774
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 296 VTAYSDDAIRNADNVITSDYNSNCRSKFDSRIRTIQND 409
+T Y +D D ++SD + C SRI ++ND
Sbjct: 469 MTKYKEDLAIFVDKCLSSDLEARCTGGLMSRIWNLEND 506
>Z99281-2|CAB16506.2| 224|Caenorhabditis elegans Hypothetical
protein Y57G11C.4 protein.
Length = 224
Score = 27.5 bits (58), Expect = 9.2
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +2
Query: 143 SNQ--TLDEDADIEKRYTPELTEELMSAKADALLLFTEYTAIAGEELKSFLMNVTAYSDD 316
SNQ T+++ + EK+Y+ + T E+ S L + A A +E++ L V +D
Sbjct: 2 SNQSATVEQLSGFEKQYSLQ-TAEITSKIGRVHTLPSSDRAGAVQEIRKSLEEV----ND 56
Query: 317 AIRNADNVITS-DYNSNCRSKFDSRIRTIQNDARR 418
+ + V+ + N+ R+K++ R+R+ Q+D ++
Sbjct: 57 LLDQMELVVRELESNTTERTKYELRVRSYQSDKKQ 91
>Z79759-8|CAE45097.1| 619|Caenorhabditis elegans Hypothetical
protein ZK858.6 protein.
Length = 619
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 394 ANAGIEFRS-TIGVIIRGNNIVSVPY 320
AN I+++S +G ++RG+ IV+ PY
Sbjct: 65 ANGDIQYKSENLGEVMRGDRIVNTPY 90
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = -3
Query: 282 DFSSSPAIAVYSVKSSRASAFADINSSVSSGVYRFSMSASSSRVWLL*SVTSTHRES 112
D SSS + A S SS A+ +D +SS SS + S SSS S ++T +S
Sbjct: 44 DSSSSSSTASTSSSSSTAATSSDDSSSSSSSSSSSASSTSSSDTTTADSSSTTSSDS 100
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 385 PHSHDPE*RPPRGQLQRREPSQVPTRP 465
P P+ PPRG+ QR + P RP
Sbjct: 95 PEPLSPDNSPPRGKRQRHDSDNSPPRP 121
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 46 DGSAGMYLVPSATDVRTDSSFSGFSMGGRDRSKQPDPGRRR*HREAVHSRADRG 207
D G ++ + + F G GG + ++P+ GR++ H+E+ R RG
Sbjct: 277 DKRGGRFVDKPSEKEEQEKFFRGSDAGGGE-DREPEKGRKQEHKESRDRRPARG 329
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 641 SGGSAACPPGRGGSPPELGV 582
+GGS+A PP GG PP G+
Sbjct: 700 AGGSSALPPITGGPPPPPGL 719
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 641 SGGSAACPPGRGGSPPELGV 582
+GGS+A PP GG PP G+
Sbjct: 700 AGGSSALPPITGGPPPPPGL 719
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 537 IAASLARQYLE*SAGDAKLWRRSTASGRTCST 632
IAA LA Y + SA DA RRST S R+ T
Sbjct: 9 IAAILAYFYFKNSANDAPKSRRSTRSTRSTRT 40
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 641 SGGSAACPPGRGGSPPELGV 582
+GGS+A PP GG PP G+
Sbjct: 283 AGGSSALPPITGGPPPPPGL 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,242,382
Number of Sequences: 27780
Number of extensions: 324309
Number of successful extensions: 1220
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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