Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6a16
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 178 3e-45
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 177 4e-45
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 148 3e-36
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 135 2e-32
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 131 4e-31
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 111 3e-25
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 111 3e-25
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 76 2e-14
U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical pr... 75 6e-14
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 75 6e-14
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 70 2e-12
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 67 9e-12
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 62 2e-10
U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 38 0.005
U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical pr... 38 0.006
U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical pr... 30 1.6
U40797-10|AAK95871.1| 617|Caenorhabditis elegans Gex interactin... 30 1.6
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 30 1.6
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 29 2.8
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 29 2.8
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 29 3.7
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 4.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 4.9
AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical ... 28 4.9
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 27 8.6
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 27 8.6
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 178 bits (433), Expect = 3e-45
Identities = 85/176 (48%), Positives = 121/176 (68%)
Frame = +3
Query: 117 RSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHR 296
RS A T+ +A+ P PL L+E+E ++ T+R+ A I PLV++M+D+ +
Sbjct: 12 RSAAPVVATMSTKPRAHIDGHVPSPLQQLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQ 71
Query: 297 IDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNS 476
+ + F+NGLMGIE P +Y G G +F +LV+EEL++VDP+V+ +VD+ NTLV
Sbjct: 72 MHQSVITGTFENGLMGIEIPEKYGGPGSSFFDAVLVIEELAKVDPSVSVFVDVQNTLVAP 131
Query: 477 LFMKLGTEEQKKKYLTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGS 644
L ++LGTEEQK+KYL K+ TE GSF L+E SGSDAFALKT AKK+G+ ++ISGS
Sbjct: 132 LIIQLGTEEQKQKYLPKIVTEAIGSFALSETGSGSDAFALKTTAKKDGDDFVISGS 187
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 177 bits (432), Expect = 4e-45
Identities = 80/181 (44%), Positives = 121/181 (66%)
Frame = +3
Query: 102 ILEQWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKM 281
I+ RS + A TP P+ +LTE+EL +T+RK + + + PLV++M
Sbjct: 15 IISTIRSSYSTATAVSISRHCEDFTGTPPPVNLLTENELFFADTVRKFSKDVVKPLVREM 74
Query: 282 EDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHN 461
+ ++ + Q +F+NGLMG+ P EY GSG +F M+V+EEL++ DP+V+A V IHN
Sbjct: 75 DKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHN 134
Query: 462 TLVNSLFMKLGTEEQKKKYLTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISG 641
TL S+ + GTEEQK KYL +LC++ SFC++E +GSDAFALKT+AK++G+H++ISG
Sbjct: 135 TLPVSMIIDYGTEEQKLKYLPRLCSDSLASFCISESGAGSDAFALKTIAKRDGDHFLISG 194
Query: 642 S 644
+
Sbjct: 195 T 195
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 148 bits (359), Expect = 3e-36
Identities = 73/178 (41%), Positives = 113/178 (63%), Gaps = 2/178 (1%)
Frame = +3
Query: 117 RSQATAAVGAKTQMKAYSTEVTPR--PLTMLTEDELAMRETIRKLATEQISPLVKKMEDE 290
R +A+ + + S + PR PL L E+E + E ++ A + PLV++M+ +
Sbjct: 6 RKLPISAISTFSTTGSISAQQQPRVFPLQHLNENEKKLVEKVKNFAQSSVKPLVREMDRD 65
Query: 291 HRIDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLV 470
RI+ + + FD LMG++ +Y GSG +F ++L VEELS++DPA+A + + N LV
Sbjct: 66 ARINKQLLKKAFDLKLMGLKIDPKYGGSGVSFFELVLAVEELSKIDPAIALIMHLQNALV 125
Query: 471 NSLFMKLGTEEQKKKYLTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGS 644
L + G EE K+KYL KLC + G+F L+E SGSDAFA++TVAKK+G+H+I++GS
Sbjct: 126 APLIEEFGNEELKEKYLKKLCKDSVGAFALSEVVSGSDAFAMQTVAKKDGDHFILNGS 183
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 135 bits (327), Expect = 2e-32
Identities = 63/107 (58%), Positives = 79/107 (73%)
Frame = +3
Query: 324 FDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEE 503
F+NGLMGIE P +Y G G F LV+EE+S+VD +V A VD+HNTL L ++LGTE+
Sbjct: 16 FENGLMGIEVPEKYGGPGATFFDAALVIEEISKVDASVGAMVDVHNTLFIPLIIELGTEK 75
Query: 504 QKKKYLTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGS 644
QK+KYL K T GSF L+E SGSDAFALKT AKK+G+ Y+I+GS
Sbjct: 76 QKEKYLPKCYTSSVGSFALSETGSGSDAFALKTTAKKDGDDYVINGS 122
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 131 bits (317), Expect = 4e-31
Identities = 56/102 (54%), Positives = 79/102 (77%)
Frame = +3
Query: 339 MGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKY 518
MG+ P EY GSG +F M+V+EEL++ DP+V+A V IHNTL S+ + GTEEQK KY
Sbjct: 1 MGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKY 60
Query: 519 LTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGS 644
L +LC++ SFC++E +GSDAFALKT+AK++G+H++ISG+
Sbjct: 61 LPRLCSDSLASFCISESGAGSDAFALKTIAKRDGDHFLISGT 102
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 111 bits (268), Expect = 3e-25
Identities = 53/151 (35%), Positives = 97/151 (64%), Gaps = 3/151 (1%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDD--GIRQMLFDNGLMGIETPVEYSGS 374
L ++E+A+R++IR+ A ++++P K++ ++ D + L D GL+GI P EY GS
Sbjct: 39 LNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGS 98
Query: 375 GCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCT-EYAGS 551
G N+ + ++ +EELSR +A H+ L + ++ G+EEQ+KKYL KL + E+ G+
Sbjct: 99 GMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKLISGEHMGA 158
Query: 552 FCLTEPSSGSDAFALKTVAKKEGEHYIISGS 644
++E +GSD ++K A+K+G+ Y+++G+
Sbjct: 159 LAMSEAQAGSDVVSMKLRAEKKGDKYVLNGT 189
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 111 bits (268), Expect = 3e-25
Identities = 53/151 (35%), Positives = 97/151 (64%), Gaps = 3/151 (1%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDD--GIRQMLFDNGLMGIETPVEYSGS 374
L ++E+A+R++IR+ A ++++P K++ ++ D + L D GL+GI P EY GS
Sbjct: 39 LNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGS 98
Query: 375 GCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCT-EYAGS 551
G N+ + ++ +EELSR +A H+ L + ++ G+EEQ+KKYL KL + E+ G+
Sbjct: 99 GMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKLISGEHMGA 158
Query: 552 FCLTEPSSGSDAFALKTVAKKEGEHYIISGS 644
++E +GSD ++K A+K+G+ Y+++G+
Sbjct: 159 LAMSEAQAGSDVVSMKLRAEKKGDKYVLNGT 189
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 79.0 bits (186), Expect = 3e-15
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 380
L+E + +++ K + + + P K ++ I + GLM + P +Y G G
Sbjct: 31 LSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGPGM 90
Query: 381 NFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTE-YAGSFC 557
L L+VE LS + + + + +++ G EEQKKKYL L E S+C
Sbjct: 91 TTLETALIVEALSYGCTGIQLGIMGPSLAIAPVYIS-GNEEQKKKYLGALAAEPIIASYC 149
Query: 558 LTEPSSGSDAFALKTVAKKEGEHYIISGS 644
+TEP +GSD +KT +K+G+ YII+GS
Sbjct: 150 VTEPGAGSDVNGVKTKCEKKGDEYIINGS 178
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 75.8 bits (178), Expect = 2e-14
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Frame = +3
Query: 186 RPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEY 365
RP L D + E + A +++ P + + + + + + + G I ++
Sbjct: 22 RPGVGLERDVEDVLEAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDH 81
Query: 366 SGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCT-EY 542
GSG + L ++ E+LS + AAY+ IHN + + G E+ K+ L + +
Sbjct: 82 GGSGLSRLHASVIFEQLSMGCVSTAAYISIHN-MCAWMLDTYGPEKLKEDLLPDMAVFKK 140
Query: 543 AGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGS 644
GS+CLTEP +GSDA +++T A K+G++Y+++GS
Sbjct: 141 LGSYCLTEPDAGSDAASIRTTATKKGDYYVVNGS 174
>U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical
protein E04F6.5b protein.
Length = 408
Score = 74.5 bits (175), Expect = 6e-14
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Frame = +3
Query: 159 KAYSTEVTPRPLTMLTEDE--LAM-RETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFD 329
KA + +V P PL M E + L M + K+ E ++ +VK E I + +
Sbjct: 50 KAVTDQVFPYPLNMTDEQKETLGMVMSPLEKMLVE-VNDVVKNDETSD-IPRAVLDQFAE 107
Query: 330 NGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQK 509
G G+ P E GSG N M V E + D + H ++ + GT+ QK
Sbjct: 108 LGTFGVLVPPELEGSGFNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQK 167
Query: 510 KKYLTKLCT-EYAGSFCLTEPSSGSDAFALKTVAK--KEGEHYIISG 641
+KYL L T +F LTEP++GSDA +++T A+ +G+HY+++G
Sbjct: 168 QKYLPDLATGRKFAAFALTEPTTGSDASSVRTRAELSADGKHYVLNG 214
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 74.5 bits (175), Expect = 6e-14
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Frame = +3
Query: 159 KAYSTEVTPRPLTMLTEDE--LAM-RETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFD 329
KA + +V P PL M E + L M + K+ E ++ +VK E I + +
Sbjct: 50 KAVTDQVFPYPLNMTDEQKETLGMVMSPLEKMLVE-VNDVVKNDETSD-IPRAVLDQFAE 107
Query: 330 NGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQK 509
G G+ P E GSG N M V E + D + H ++ + GT+ QK
Sbjct: 108 LGTFGVLVPPELEGSGFNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQK 167
Query: 510 KKYLTKLCT-EYAGSFCLTEPSSGSDAFALKTVAK--KEGEHYIISG 641
+KYL L T +F LTEP++GSDA +++T A+ +G+HY+++G
Sbjct: 168 QKYLPDLATGRKFAAFALTEPTTGSDASSVRTRAELSADGKHYVLNG 214
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 72.9 bits (171), Expect = 2e-13
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 380
L++ + ++ K + + + P K + I + G M P +Y G G
Sbjct: 25 LSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYGGPGL 84
Query: 381 NFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTE-YAGSFC 557
+ L L+VE LS + + +L + GTEEQKKKYL L E S+C
Sbjct: 85 SNLDTALIVEALSYGCSGLQIAI-FGPSLAAAPICLSGTEEQKKKYLGMLAAEPIIASYC 143
Query: 558 LTEPSSGSDAFALKTVAKKEGEHYIISGS 644
+TEP +GSD +KT A K+G+ YII+GS
Sbjct: 144 VTEPGAGSDVNGVKTKAVKQGDEYIINGS 172
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 69.7 bits (163), Expect = 2e-12
Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
Frame = +3
Query: 144 AKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDG-IRQM 320
A T S + R + E M++++ KL E+I+P V K E + R + +M
Sbjct: 40 AVTSTSPKSEKPVAREHMIYDETHFVMQKSLGKLIEEKINPNVAKWEQDGRYPAHLVFKM 99
Query: 321 LFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVD-PAVAAYVDIHNTLVNSLFMKLGT 497
L D+G+ G+ P + G+G + + E++ ++ ++ V + + + G+
Sbjct: 100 LGDHGVFGVNKPEAFGGTGTDIAMATAIAEQMGAINCGSIPMSVMVQTDMSTPALAQFGS 159
Query: 498 EEQKKKYLTKLCT-EYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGS 644
+ ++++L T + S ++EP +GSD A+ T A+++G II+GS
Sbjct: 160 DALRERFLRPSITGDLVSSLAVSEPHAGSDVSAVHTHARRQGSDLIINGS 209
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Frame = +3
Query: 207 EDELAMRETIRKLATEQISPLVKKMEDEHRIDDG-IRQMLFDNGLMGIETPVEYSGSGCN 383
E AM+ ++ KL E+I+P V + E R + +ML G+ + PV+Y G+G +
Sbjct: 27 EPHFAMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTGRD 86
Query: 384 FLTMMLVVEELSRVD-PAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLT-KLCTEYAGSFC 557
F + + E++ VD ++ V + + + + G++ + ++L + + S
Sbjct: 87 FAMSIAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFLRPSINGDLVSSIA 146
Query: 558 LTEPSSGSDAFALKTVAKKEGEHYIISGS 644
++EP +GSD A++T A++ G II+GS
Sbjct: 147 VSEPHAGSDVSAIRTHARRYGSDLIINGS 175
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 67.3 bits (157), Expect = 9e-12
Identities = 35/149 (23%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 380
LT D+ R +RK +++ P+ + + I + G + + P Y G G
Sbjct: 28 LTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPEAYGGLGV 87
Query: 381 NFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTE-YAGSFC 557
+ ++ ++ EE++ +A + ++ + L + ++ KK++L ++ + S+
Sbjct: 88 DMVSNCIISEEMAYGCSGIATAIMANDLALTPLIL-CANDDIKKRFLGRMIDNPFVASYA 146
Query: 558 LTEPSSGSDAFALKTVAKKEGEHYIISGS 644
+TEP +GSD +KT +K+G+ YI++GS
Sbjct: 147 VTEPGAGSDVAGVKTKCEKKGDEYILNGS 175
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 62.5 bits (145), Expect = 2e-10
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 380
LTEDE ++ + R+ E++ P V + + D + + GL+G Y G GC
Sbjct: 32 LTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLG----APYQGYGC 87
Query: 381 NFLTMM---LVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCT-EYAG 548
+ + L+ E+ RVD + + + +LV G+E+QK+KY+ L + + G
Sbjct: 88 AGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASGKKIG 147
Query: 549 SFCLTEPSSGSDAFALKTVA 608
F LTEP+ GS+ ++T A
Sbjct: 148 CFGLTEPNHGSNPGGMETKA 167
>U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical
protein C17C3.12b protein.
Length = 307
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 117 RSQATAAVGAKTQMKAYSTEVTPR--PLTMLTEDELAMRETIRKLATEQISPLVKKMEDE 290
R +A+ + + S + PR PL L E+E + E ++ A + PLV++M+ +
Sbjct: 6 RKLPISAISTFSTTGSISAQQQPRVFPLQHLNENEKKLVEKVKNFAQSSVKPLVREMDRD 65
Query: 291 HRIDDGIRQMLFDNGLMGIE 350
RI+ + + FD LMG++
Sbjct: 66 ARINKQLLKKAFDLKLMGLK 85
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 477 LFMKLGTEEQKKKYLTKLCT-EYAGSFCLTEPS-SGSDAFALKTVAKKEGEHYIIS 638
+ +K G+EEQK K+LT L E F +TEP + SDA ++ + G YII+
Sbjct: 691 VLIKYGSEEQKSKWLTPLLNGEIKSCFAMTEPDVASSDATNIQGSIVRVGNEYIIN 746
>U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical
protein F58F9.7 protein.
Length = 667
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 402 VVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTEYAGSFCLTEPSSGS 581
+ E L D +A + +H + + +GT+ K E G+FCLTE GS
Sbjct: 88 LTETLEAYDQGTSARLFLHGNVFGAAVKSMGTDRHKDLIQKTENNEIVGAFCLTEVGHGS 147
Query: 582 DAFALKTVA 608
+ ++T A
Sbjct: 148 NTAEIQTTA 156
>U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical
protein C17C3.12c protein.
Length = 220
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/17 (58%), Positives = 17/17 (100%)
Frame = +3
Query: 594 LKTVAKKEGEHYIISGS 644
++TVAKK+G+H+I++GS
Sbjct: 1 MQTVAKKDGDHFILNGS 17
>U40797-10|AAK95871.1| 617|Caenorhabditis elegans Gex interacting
protein protein9, isoform a protein.
Length = 617
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 273 KKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVD 452
K +E E ++ + L N + + + G G + V EELS VD V Y
Sbjct: 99 KLIEKEGKLASDTIEALRSNAIFSLAIGKYFDGIGMCNKDLSKVFEELS-VDWNV--YTT 155
Query: 453 IH-NTLVNSLFMKLGTEEQKKKYL 521
H + LV ++ G++EQK KYL
Sbjct: 156 SHISLLVANILTIYGSDEQKSKYL 179
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.6
Identities = 30/125 (24%), Positives = 53/125 (42%)
Frame = +3
Query: 117 RSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHR 296
++QA +V + + + +P+ E A + RK AT S + E
Sbjct: 14 KAQAQTSVETVAKRRGRPAKEKKQPVPKKAEPAKASKPRARKSATGNKSEKPQASVAEQA 73
Query: 297 IDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNS 476
I Q+ +N ++GIE P + + + VVE + R VAAY ++ T +N
Sbjct: 74 GISQIPQLQHNNEVIGIEAPTTSAAPSRAQIPEVPVVEHIER--HKVAAY--LNRTYLNR 129
Query: 477 LFMKL 491
++L
Sbjct: 130 RRLRL 134
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
protein F31D5.5 protein.
Length = 1788
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 114 WRSQATAAVGAKTQMKAYSTEVTPRPLTMLTED-ELAMRE 230
W + AT T + A T TP+P T L ED ++++E
Sbjct: 206 WWNAATGTTDKTTSVAAGGTTNTPKPFTFLLEDVNISLKE 245
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 114 WRSQATAAVGAKTQMKAYSTEVTPRPLTMLTED-ELAMRE 230
W + AT T + A T TP+P T L ED ++++E
Sbjct: 175 WWNAATGTTDKTTSVAAGGTTNTPKPFTFLLEDVNISLKE 214
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 74 PITTRCWQQDFRTMEVPGNGCRW----SKDSDESIQHRS 178
P + C Q DFR M G C W K +D+++ HR+
Sbjct: 379 PEPSVCCQFDFRRMPEGGKSCDWGIPPQKINDDNVAHRA 417
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 74 PITTRCWQQDFRTMEVPGNGCRW----SKDSDESIQHRS 178
P + C Q DFR M G C W K +D+++ HR+
Sbjct: 377 PEPSVCCQFDFRRMPEGGKSCDWGIPPQKINDDNVAHRA 415
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 401 QHHCQEIAAGTAVFYRSFDAHQPIIKQHL 315
+HH E T V FD H+P++ Q +
Sbjct: 3334 KHHVTETTTTTTVTREYFDEHEPLVSQEI 3362
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 401 QHHCQEIAAGTAVFYRSFDAHQPIIKQHL 315
+HH E T V FD H+P++ Q +
Sbjct: 3334 KHHVTETTTTTTVTREYFDEHEPLVSQEI 3362
>AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical
protein Y53H1A.3 protein.
Length = 201
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 332 WVDGHRNSGRIQRFRLQFPDNDVGGGRTVSSGPSR 436
W DGH F PDND G GR GP R
Sbjct: 123 WTDGHTTGTEAMVFGPGQPDNDHGAGR----GPQR 153
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 360 LPEFRCPSTHYQTTSVGYHHRCGVHLPF 277
L + C T +T S+G H G HLP+
Sbjct: 532 LESYSCIVTRAETLSIGDHFLVGPHLPY 559
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 360 LPEFRCPSTHYQTTSVGYHHRCGVHLPF 277
L + C T +T S+G H G HLP+
Sbjct: 482 LESYSCIVTRAETLSIGDHFLVGPHLPY 509
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,851,467
Number of Sequences: 27780
Number of extensions: 321074
Number of successful extensions: 1127
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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