Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6a15
(431 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC222.04c |ies6||chromatin remodeling complex subunit Ies6 |Sc... 60 2e-10
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 28 0.70
SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces ... 27 1.6
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 26 2.2
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 26 2.8
SPAC16C9.03 |||export adaptor|Schizosaccharomyces pombe|chr 1|||... 26 2.8
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 26 2.8
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 25 3.8
SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|ch... 25 5.0
SPBC32H8.08c |||mannosyltransferase complex subunit |Schizosacch... 25 6.6
SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosac... 24 8.7
>SPAC222.04c |ies6||chromatin remodeling complex subunit Ies6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 59.7 bits (138), Expect = 2e-10
Identities = 32/92 (34%), Positives = 52/92 (56%)
Frame = +1
Query: 58 SKKRMWRSLKQILTADRALPWPNEAVLYYSINAPPTFKPIKKYSDISGLPAPYMDRHSKL 237
++ R R+L+QI+ D P++ Y SI APP+ P KY D++GL A Y D ++L
Sbjct: 26 AQPRRNRNLRQIIQNDPVQNEPSK-FSYSSIEAPPSVLPQPKYCDVTGLLAIYTDPKTRL 84
Query: 238 YFSNAEEFATVRNLPMDITAGYLQLRGANTIV 333
+ N E + +R LP YL+LR ++ ++
Sbjct: 85 RYHNKEIYGLIRELPSGADQEYLKLRSSDVVL 116
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 27.9 bits (59), Expect = 0.70
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 124 NEAVLYYSINAPPTFKPIKKYSDISGLPAP 213
N + L + P F PI SDI GLP P
Sbjct: 163 NGSELNVGVLGPSLFNPIGNLSDIPGLPQP 192
>SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 780
Score = 26.6 bits (56), Expect = 1.6
Identities = 20/77 (25%), Positives = 36/77 (46%)
Frame = +1
Query: 7 EKYYCFKRENKFIVKSGSKKRMWRSLKQILTADRALPWPNEAVLYYSINAPPTFKPIKKY 186
+K + FK+ K +VK + + + + + + + + P PN + + S P P
Sbjct: 157 DKTHSFKKFYKSLVKEDEENGIEKKINEAMNSSASQPLPN-STNFASTTFPSV--PFHPL 213
Query: 187 SDISGLPAPYMDRHSKL 237
SGL Y+DR+S L
Sbjct: 214 PVDSGL-QKYIDRNSNL 229
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 26.2 bits (55), Expect = 2.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 178 KKYSDISGLPAPYMDRHSKLYFSNAEEFATVRN 276
K Y D G P P D H++L + F+ + N
Sbjct: 749 KAYFDSEGKPHPITDSHNRLLVPSTRTFSQLLN 781
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 25.8 bits (54), Expect = 2.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 127 EAVLYYSINAPPTFKPIKKYSDISGL 204
E V + SIN P+FK + K S IS L
Sbjct: 283 ETVGWVSINGIPSFKSLVKLSGISSL 308
>SPAC16C9.03 |||export adaptor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 2.8
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 137 KTASFGHGNARSAVKICFK-DLHIRFLDPLFTMNLFSLLKQ*YF 9
KT + HGN V +C K IRFLDPL T+ +L Y+
Sbjct: 265 KTVAKAHGNIAQLV-VCTKVGPTIRFLDPL-TLQTCDMLPSIYW 306
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 25.8 bits (54), Expect = 2.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 306 TTQRSKHYRGIRCMILYAVNTYLLKKHIDYH 398
T + S H + I C+ + + NT LL +D H
Sbjct: 243 TKKLSNHQKSITCLAMNSENTRLLSGGLDGH 273
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.4 bits (53), Expect = 3.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 200 DYQHHIWIDTQNFISLMLKSLQQS 271
D IW+ T++ +S MLK LQ S
Sbjct: 214 DETEPIWVSTESQLSDMLKELQNS 237
>SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 505
Score = 25.0 bits (52), Expect = 5.0
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +2
Query: 104 IEHYHGQMKQFYIIQ*MLRQHSSLLKNIQTYQDYQHHIW 220
+E Y Y++ L + S++ IQT+ +HH++
Sbjct: 314 LEEYFASKLPLYVVIGQLSLYGSIISIIQTFIFDRHHLY 352
>SPBC32H8.08c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 24.6 bits (51), Expect = 6.6
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 190 DISGLPAPYMDRHSKLY 240
DIS P YMD+H+K+Y
Sbjct: 234 DISYDPFYYMDKHNKVY 250
>SPCC1827.02c |||cholinephosphate cytidylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 24.2 bits (50), Expect = 8.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 142 YSINAPPTFKPIKKYSD 192
Y IN PP +P++ Y+D
Sbjct: 83 YPINDPPEGRPVRVYAD 99
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,748,319
Number of Sequences: 5004
Number of extensions: 35452
Number of successful extensions: 80
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 154067960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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