Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6a13
(586 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 36 0.028
AC024853-4|AAK68586.1| 746|Caenorhabditis elegans Hypothetical ... 34 0.085
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 31 0.46
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 31 0.46
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 31 0.46
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 31 0.46
Z81130-6|CAB03419.4| 312|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 0.60
Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue... 31 0.60
U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeas... 31 0.60
U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeas... 31 0.60
U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeas... 31 0.60
U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeas... 31 0.60
U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeas... 31 0.60
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 0.60
AF016428-3|AAO26000.3| 445|Caenorhabditis elegans Ground-like (... 31 0.80
Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 30 1.1
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 30 1.1
U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical pr... 30 1.1
U12964-1|AAL02497.1| 465|Caenorhabditis elegans Hypothetical pr... 30 1.1
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 30 1.1
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.4
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 1.8
U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein. 29 1.8
U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein. 29 1.8
U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical pr... 29 1.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 1.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 1.8
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 29 2.4
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 2.4
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 2.4
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 29 2.4
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 29 2.4
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 3.2
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 28 4.2
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 28 4.2
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 4.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 4.2
Z48582-1|CAA88465.1| 490|Caenorhabditis elegans Hypothetical pr... 28 5.6
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 28 5.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 5.6
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 28 5.6
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 28 5.6
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 28 5.6
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical pr... 27 7.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 27 7.4
Z32673-1|CAA83585.1| 472|Caenorhabditis elegans transcription f... 27 9.8
U41535-12|AAK67251.1| 438|Caenorhabditis elegans Abnormal cell ... 27 9.8
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL117203-10|CAB60424.2| 855|Caenorhabditis elegans Hypothetical... 27 9.8
AJ130957-1|CAA10262.1| 438|Caenorhabditis elegans LIN-26B protein. 27 9.8
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 27 9.8
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 27 9.8
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 35.5 bits (78), Expect = 0.028
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +3
Query: 306 TVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSP---PESMLHSPPNLHTKPPPPY 476
T+P S SA +P+ P + + R+ P P SM + P K PPP
Sbjct: 147 TIPISSSEDLSAVSPPPPLPSVPPSKERIKRIPSYLKPTPAPRSMSATLPRARLKTPPPP 206
Query: 477 PEDNNFLDRLYDFEGYPTPSPSSDEGSIPTV 569
P N D L + + S SS G +P +
Sbjct: 207 PPVTNQFDTLP--VSFRSSSTSSSTGGLPRI 235
>AC024853-4|AAK68586.1| 746|Caenorhabditis elegans Hypothetical
protein Y71F9AR.3 protein.
Length = 746
Score = 33.9 bits (74), Expect = 0.085
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 270 HGEDFYCNQMPQTVPRSGCSPPSASQ-GERAVPTSPADLQ 386
H DF+ N++P T SPPS+SQ A P P Q
Sbjct: 181 HDADFFANELPSTPSEREASPPSSSQFSNSAAPNLPETKQ 220
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 31.5 bits (68), Expect = 0.46
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 330 PPSASQGERAVPTSP--ADLQHLLRLLGASSPPESMLHSPPNLHTKP-PPPYPEDNNFLD 500
PP +SQ R+V SP A + H ++ P P L P PPP PE + +
Sbjct: 114 PPPSSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSPPPRPPPPPEYDEEEE 173
Query: 501 RLYDFEGYPTPSPS 542
+E YP P S
Sbjct: 174 TRAFWERYPLPQAS 187
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 31.5 bits (68), Expect = 0.46
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 330 PPSASQGERAVPTSP--ADLQHLLRLLGASSPPESMLHSPPNLHTKP-PPPYPEDNNFLD 500
PP +SQ R+V SP A + H ++ P P L P PPP PE + +
Sbjct: 755 PPPSSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSPPPRPPPPPEYDEEEE 814
Query: 501 RLYDFEGYPTPSPS 542
+E YP P S
Sbjct: 815 TRAFWERYPLPQAS 828
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 31.5 bits (68), Expect = 0.46
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 330 PPSASQGERAVPTSP--ADLQHLLRLLGASSPPESMLHSPPNLHTKP-PPPYPEDNNFLD 500
PP +SQ R+V SP A + H ++ P P L P PPP PE + +
Sbjct: 755 PPPSSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSPPPRPPPPPEYDEEEE 814
Query: 501 RLYDFEGYPTPSPS 542
+E YP P S
Sbjct: 815 TRAFWERYPLPQAS 828
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 31.5 bits (68), Expect = 0.46
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 330 PPSASQGERAVPTSP--ADLQHLLRLLGASSPPESMLHSPPNLHTKP-PPPYPEDNNFLD 500
PP +SQ R+V SP A + H ++ P P L P PPP PE + +
Sbjct: 755 PPPSSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSPPPRPPPPPEYDEEEE 814
Query: 501 RLYDFEGYPTPSPS 542
+E YP P S
Sbjct: 815 TRAFWERYPLPQAS 828
>Z81130-6|CAB03419.4| 312|Caenorhabditis elegans Hypothetical
protein T23G11.7b protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.60
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 330 PPSASQG-ERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYPEDNNFLDRL 506
PP+ G +P P+D + ++ P S PNL + P P N +
Sbjct: 196 PPAPGFGFGGGIPNVPSDHSLPPQPPARNNIPPPSYSSTPNLPSHTPFSAPPPRN---QP 252
Query: 507 YDFEGYPTPSPSSDEGSIPT 566
+E + TP P + GS+PT
Sbjct: 253 QQYEDFSTPQPVAPPGSVPT 272
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 0.60
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Frame = +3
Query: 204 PTCPGETGKASGPPVILQS*KYHGEDFYCNQMPQTVPRSGCSPPSASQGERAVPTSPADL 383
P P K PP +Q + H Y Q P ++PRS +P Q + ++P P
Sbjct: 714 PFRPTSRPKTPPPPPPMQH-QNHQNHQYQQQHP-SLPRSASTPQPIQQQQSSIPPPPPP- 770
Query: 384 QHLLRLLGASSPPE---SMLH---SPPNLHTKPPPPYP 479
PP +M+H +PP+ + PPPP P
Sbjct: 771 ---------PPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 0.60
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Frame = +3
Query: 204 PTCPGETGKASGPPVILQS*KYHGEDFYCNQMPQTVPRSGCSPPSASQGERAVPTSPADL 383
P P K PP +Q + H Y Q P ++PRS +P Q + ++P P
Sbjct: 714 PFRPTSRPKTPPPPPPMQH-QNHQNHQYQQQHP-SLPRSASTPQPIQQQQSSIPPPPPP- 770
Query: 384 QHLLRLLGASSPPE---SMLH---SPPNLHTKPPPPYP 479
PP +M+H +PP+ + PPPP P
Sbjct: 771 ---------PPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue
protein.
Length = 897
Score = 31.1 bits (67), Expect = 0.60
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 396 RLLGASSPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSPSSDEGSIPTVAL 575
RLL A+SP + +L+ P + Y + + EG P P S +EG IP+VA
Sbjct: 399 RLLEAASPEQVLLYLPQLVQALK---YEQGQQLPE-----EGNPVPVVSEEEGKIPSVAT 450
Query: 576 QPS 584
P+
Sbjct: 451 TPT 453
>U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform b
protein.
Length = 650
Score = 31.1 bits (67), Expect = 0.60
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 396 RLLGASSPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSPSSDEGSIPTVAL 575
RLL A+SP + +L+ P + Y + + EG P P S +EG IP+VA
Sbjct: 152 RLLEAASPEQVLLYLPQLVQALK---YEQGQQLPE-----EGNPVPVVSEEEGKIPSVAT 203
Query: 576 QPS 584
P+
Sbjct: 204 TPT 206
>U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform d
protein.
Length = 716
Score = 31.1 bits (67), Expect = 0.60
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 396 RLLGASSPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSPSSDEGSIPTVAL 575
RLL A+SP + +L+ P + Y + + EG P P S +EG IP+VA
Sbjct: 399 RLLEAASPEQVLLYLPQLVQALK---YEQGQQLPE-----EGNPVPVVSEEEGKIPSVAT 450
Query: 576 QPS 584
P+
Sbjct: 451 TPT 453
>U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform c
protein.
Length = 897
Score = 31.1 bits (67), Expect = 0.60
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 396 RLLGASSPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSPSSDEGSIPTVAL 575
RLL A+SP + +L+ P + Y + + EG P P S +EG IP+VA
Sbjct: 399 RLLEAASPEQVLLYLPQLVQALK---YEQGQQLPE-----EGNPVPVVSEEEGKIPSVAT 450
Query: 576 QPS 584
P+
Sbjct: 451 TPT 453
>U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform e
protein.
Length = 720
Score = 31.1 bits (67), Expect = 0.60
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 396 RLLGASSPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSPSSDEGSIPTVAL 575
RLL A+SP + +L+ P + Y + + EG P P S +EG IP+VA
Sbjct: 403 RLLEAASPEQVLLYLPQLVQALK---YEQGQQLPE-----EGNPVPVVSEEEGKIPSVAT 454
Query: 576 QPS 584
P+
Sbjct: 455 TPT 457
>U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform a
protein.
Length = 901
Score = 31.1 bits (67), Expect = 0.60
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 396 RLLGASSPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSPSSDEGSIPTVAL 575
RLL A+SP + +L+ P + Y + + EG P P S +EG IP+VA
Sbjct: 403 RLLEAASPEQVLLYLPQLVQALK---YEQGQQLPE-----EGNPVPVVSEEEGKIPSVAT 454
Query: 576 QPS 584
P+
Sbjct: 455 TPT 457
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 0.60
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Frame = +3
Query: 327 SPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYPE----DNNF 494
+PP A + AVP +PA Q PP + PP H PPPP P D++
Sbjct: 111 APPPAPYPQHAVP-APAPYQQQ-----PPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSA 164
Query: 495 LDRLYDFEGYPTPSPSSDEGSIP 563
Y P P P + P
Sbjct: 165 PRPAYIEHSAPPPQPQYPQQQPP 187
>AF016428-3|AAO26000.3| 445|Caenorhabditis elegans Ground-like (grd
related) protein18 protein.
Length = 445
Score = 30.7 bits (66), Expect = 0.80
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 408 ASSPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPS 536
A+ PP + P L T PPP P+DN+ L+ YPTPS
Sbjct: 90 ANIPPFMQSYPQPPLFTTPPP-LPQDNSILN-------YPTPS 124
>Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +3
Query: 381 LQHLLRLLGASSPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEG---YPTPS 536
+ H + G P + + PPN H PP +D N D + D G Y PS
Sbjct: 256 MPHGTAIGGGVQPVSNFIPPPPNRHPNEPP--QDDENIYDHIPDVSGGNIYEVPS 308
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +3
Query: 381 LQHLLRLLGASSPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEG---YPTPS 536
+ H + G P + + PPN H PP +D N D + D G Y PS
Sbjct: 256 MPHGTAIGGGVQPVSNFIPPPPNRHPNEPP--QDDENIYDHIPDVSGGNIYEVPS 308
>U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical
protein F10C1.5 protein.
Length = 280
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 342 SQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYP 479
SQG+R+ P+SP + ++ SSPPE S PN P P
Sbjct: 139 SQGQRSSPSSPTGSE---TVVSTSSPPELSSESTPNTSGSVIPTSP 181
>U12964-1|AAL02497.1| 465|Caenorhabditis elegans Hypothetical
protein F26F4.5 protein.
Length = 465
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 15/87 (17%)
Frame = +3
Query: 291 NQMPQTVPRSGCSPPSASQGERAVPTSPADLQHLLR------------LLGASS---PPE 425
N P +P G PP+ SQ ++ TS + L + R +G SS P E
Sbjct: 106 NHAPPPMPIEGLPPPT-SQNQKKSRTSSSSLASVFRSRASSPIERMRKFIGRSSSKQPKE 164
Query: 426 SMLHSPPNLHTKPPPPYPEDNNFLDRL 506
+ SPP+ T P P ++++ ++ L
Sbjct: 165 IVAASPPSTSTTPTPSSTDNHHIIEEL 191
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 457 VCRFGGEWSMDSGGDEAPNKRSRCCRSAG 371
VC FGG+ + + GD NK SR RSAG
Sbjct: 571 VCPFGGKPNQRTHGDTFVNKESRFHRSAG 599
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 457 VCRFGGEWSMDSGGDEAPNKRSRCCRSAG 371
VC FGG+ + + GD NK SR RSAG
Sbjct: 568 VCPFGGKPNQRTHGDTFVNKESRFHRSAG 596
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 1.4
Identities = 33/94 (35%), Positives = 36/94 (38%)
Frame = +3
Query: 300 PQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYP 479
P P G SPP A G + P PA A SPP SPP T PPP P
Sbjct: 238 PPPPPPKG-SPPLAGSG--SPPPPPA----------AGSPPPPRTGSPPPPPTGSPPPPP 284
Query: 480 EDNNFLDRLYDFEGYPTPSPSSDEGSIPTVALQP 581
+ G P P P GS PT +L P
Sbjct: 285 AGGS---PPPPRAGSP-PPPPPPRGSPPTGSLPP 314
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/76 (28%), Positives = 28/76 (36%)
Frame = +3
Query: 312 PRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYPEDNN 491
P +G SPP G P P G+ PP++ PP PPPP +
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPT----GSLPPPQAGGSPPPAGTGSPPPPPRQKRQ 338
Query: 492 FLDRLYDFEGYPTPSP 539
+R PT SP
Sbjct: 339 APERSPPTGSPPTGSP 354
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 1.4
Identities = 33/94 (35%), Positives = 36/94 (38%)
Frame = +3
Query: 300 PQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYP 479
P P G SPP A G + P PA A SPP SPP T PPP P
Sbjct: 259 PPPPPPKG-SPPLAGSG--SPPPPPA----------AGSPPPPRTGSPPPPPTGSPPPPP 305
Query: 480 EDNNFLDRLYDFEGYPTPSPSSDEGSIPTVALQP 581
+ G P P P GS PT +L P
Sbjct: 306 AGGS---PPPPRAGSP-PPPPPPRGSPPTGSLPP 335
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/76 (28%), Positives = 28/76 (36%)
Frame = +3
Query: 312 PRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYPEDNN 491
P +G SPP G P P G+ PP++ PP PPPP +
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPT----GSLPPPQAGGSPPPAGTGSPPPPPRQKRQ 359
Query: 492 FLDRLYDFEGYPTPSP 539
+R PT SP
Sbjct: 360 APERSPPTGSPPTGSP 375
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.4
Identities = 33/94 (35%), Positives = 36/94 (38%)
Frame = +3
Query: 300 PQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYP 479
P P G SPP A G + P PA A SPP SPP T PPP P
Sbjct: 244 PPPPPPKG-SPPLAGSG--SPPPPPA----------AGSPPPPRTGSPPPPPTGSPPPPP 290
Query: 480 EDNNFLDRLYDFEGYPTPSPSSDEGSIPTVALQP 581
+ G P P P GS PT +L P
Sbjct: 291 AGGS---PPPPRAGSP-PPPPPPRGSPPTGSLPP 320
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/76 (28%), Positives = 28/76 (36%)
Frame = +3
Query: 312 PRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYPEDNN 491
P +G SPP G P P G+ PP++ PP PPPP +
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPT----GSLPPPQAGGSPPPAGTGSPPPPPRQKRQ 344
Query: 492 FLDRLYDFEGYPTPSP 539
+R PT SP
Sbjct: 345 APERSPPTGSPPTGSP 360
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 5/113 (4%)
Frame = +3
Query: 150 GARAAVSKSHPSWLSLCSPTCPGETGKASGPPVILQS*KY-HGEDFYCNQ----MPQTVP 314
G ++ +P+ T PG G +GPP Q +Y G + Q P T
Sbjct: 274 GMPGPMTPGYPAQAPAAPRTTPGSAGPGTGPPGTPQRPQYPQGTNPQPQQAQFTYPPTQQ 333
Query: 315 RSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPP 473
+ P G PT + + R ++PP + P + P P
Sbjct: 334 MTPTGQPPGYPGMPGTPTFSSPAHQMFRQGQPTAPPGMRQYISPQAGQQQPTP 386
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 5/113 (4%)
Frame = +3
Query: 150 GARAAVSKSHPSWLSLCSPTCPGETGKASGPPVILQS*KY-HGEDFYCNQ----MPQTVP 314
G ++ +P+ T PG G +GPP Q +Y G + Q P T
Sbjct: 272 GMPGPMTPGYPAQAPAAPRTTPGSAGPGTGPPGTPQRPQYPQGTNPQPQQAQFTYPPTQQ 331
Query: 315 RSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPP 473
+ P G PT + + R ++PP + P + P P
Sbjct: 332 MTPTGQPPGYPGMPGTPTFSSPAHQMFRQGQPTAPPGMRQYISPQAGQQQPTP 384
>Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical
protein F58A3.1c protein.
Length = 629
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +3
Query: 291 NQMPQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKP 464
+QMP ++ PP + QG +P P+ + + ++ + PP +M + PN P
Sbjct: 494 SQMPTSMHNPMHMPPGSMQGHGGMPPMPSTMAN--QMPPPNLPPHTMSNQMPNSRMPP 549
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +3
Query: 291 NQMPQT--VPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKP 464
NQMP + P G PPS G+ + P ++G+ PP SM P + P
Sbjct: 540 NQMPNSRMPPMQGQMPPSGMPGQMSNPN----------MMGSGMPPMSMSSQMPGSMSNP 589
Query: 465 PP 470
P
Sbjct: 590 MP 591
>Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical
protein F58A3.1b protein.
Length = 578
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +3
Query: 291 NQMPQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKP 464
+QMP ++ PP + QG +P P+ + + ++ + PP +M + PN P
Sbjct: 443 SQMPTSMHNPMHMPPGSMQGHGGMPPMPSTMAN--QMPPPNLPPHTMSNQMPNSRMPP 498
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +3
Query: 291 NQMPQT--VPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKP 464
NQMP + P G PPS G+ + P ++G+ PP SM P + P
Sbjct: 489 NQMPNSRMPPMQGQMPPSGMPGQMSNPN----------MMGSGMPPMSMSSQMPGSMSNP 538
Query: 465 PP 470
P
Sbjct: 539 MP 540
>Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical
protein F58A3.1a protein.
Length = 592
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +3
Query: 291 NQMPQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKP 464
+QMP ++ PP + QG +P P+ + + ++ + PP +M + PN P
Sbjct: 457 SQMPTSMHNPMHMPPGSMQGHGGMPPMPSTMAN--QMPPPNLPPHTMSNQMPNSRMPP 512
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +3
Query: 291 NQMPQT--VPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKP 464
NQMP + P G PPS G+ + P ++G+ PP SM P + P
Sbjct: 503 NQMPNSRMPPMQGQMPPSGMPGQMSNPN----------MMGSGMPPMSMSSQMPGSMSNP 552
Query: 465 PP 470
P
Sbjct: 553 MP 554
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +3
Query: 300 PQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYP 479
P PR PPS+ P P + G PP PP + PPPP P
Sbjct: 281 PGMTPRPP-PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
>U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein.
Length = 579
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +3
Query: 291 NQMPQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKP 464
+QMP ++ PP + QG +P P+ + + ++ + PP +M + PN P
Sbjct: 444 SQMPTSMHNPMHMPPGSMQGHGGMPPMPSTMAN--QMPPPNLPPHTMSNQMPNSRMPP 499
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +3
Query: 291 NQMPQT--VPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKP 464
NQMP + P G PPS G+ + P ++G+ PP SM P + P
Sbjct: 490 NQMPNSRMPPMQGQMPPSGMPGQMSNPN----------MMGSGMPPMSMSSQMPGSMSNP 539
Query: 465 PP 470
P
Sbjct: 540 MP 541
>U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein.
Length = 592
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +3
Query: 291 NQMPQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKP 464
+QMP ++ PP + QG +P P+ + + ++ + PP +M + PN P
Sbjct: 457 SQMPTSMHNPMHMPPGSMQGHGGMPPMPSTMAN--QMPPPNLPPHTMSNQMPNSRMPP 512
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +3
Query: 291 NQMPQT--VPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKP 464
NQMP + P G PPS G+ + P ++G+ PP SM P + P
Sbjct: 503 NQMPNSRMPPMQGQMPPSGMPGQMSNPN----------MMGSGMPPMSMSSQMPGSMSNP 552
Query: 465 PP 470
P
Sbjct: 553 MP 554
>U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical
protein C02F12.8 protein.
Length = 687
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = +3
Query: 276 EDFYCNQMPQTVPRSGCSPPSASQG--ERAVPTSPADLQ-HLLRLLGASSPPESMLHSPP 446
+D Q V + C P + G V T A + H G PP + S P
Sbjct: 80 DDLMQQQFAAPVQNNQCPNPYQNCGYQNNLVSTLDASFKVHPFAQHGNYMPPPAQFASNP 139
Query: 447 NLHTKPPPPYPED 485
N+ +P PPY D
Sbjct: 140 NVFPQPVPPYTMD 152
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/68 (30%), Positives = 25/68 (36%)
Frame = +3
Query: 300 PQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYP 479
P PR +PP S R P +P Q +PP +PP P PP P
Sbjct: 140 PPPPPRVPRTPPPRSPPPRRPPMTPPSPQRR----PPRTPPSPEPRNPPRTPPSPIPPPP 195
Query: 480 EDNNFLDR 503
N DR
Sbjct: 196 PRLNSHDR 203
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +3
Query: 300 PQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPYP 479
P PR PPS+ P P + G PP PP + PPPP P
Sbjct: 291 PGMTPRPP-PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +3
Query: 294 QMPQTVPRSGCSPPSASQGERAVPTSPADLQHLLRL---LGASSPPESMLHSPPNLHTK- 461
Q P RS P + A P +PA + H L +SS P + PP + +
Sbjct: 431 QAPPPNVRSSEFPRLNKANKPAAPAAPAVVDHFPSLGDSSSSSSAPPLRIKVPPLVKKRQ 490
Query: 462 PPPPYP 479
PPPP P
Sbjct: 491 PPPPAP 496
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 441 PPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSPSS--DEGSIPTVALQPS 584
PP+ HT Y E++ ++ YD E S S E SIP + PS
Sbjct: 1904 PPSAHTLQSEEYQEESGNVESAYDVETDRRDSERSLKSERSIPEIHTSPS 1953
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 441 PPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSPSS--DEGSIPTVALQPS 584
PP+ HT Y E++ ++ YD E S S E SIP + PS
Sbjct: 1904 PPSAHTLQSEEYQEESGNVESAYDVETDRRDSERSLKSERSIPEIHTSPS 1953
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans
trithorax-related protein LIN-59 protein.
Length = 1312
Score = 29.1 bits (62), Expect = 2.4
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Frame = +3
Query: 240 PPVI-LQS*KYHGEDFYCNQMPQTVPRSGCSPPSAS-----QGERAVPTSPADLQH-LLR 398
PPV+ +QS +++Y NQ TVP S +P + S G ++VPTSP + ++
Sbjct: 139 PPVLNMQS----NQNWYMNQPSGTVPMSSNAPATTSSATPDSGIQSVPTSPPSPSYAMMN 194
Query: 399 LLGASSPPESMLHSPPNLHTKPP--PPYPEDNNFLDRLYDFEGYPTPSPSSDEGSIPTV 569
+ + P T P P ED++ D EG P P++ +I T+
Sbjct: 195 DVDIGDHDDEEDDDGPADFTDMPLLKPVDEDDDCYDVPCTSEG---PPPNNSNPAITTI 250
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 274 ERIFIAIRCHKPCRGPGAARLQHHKARELSPRLQLIYSTC 393
ER F+AI H ++ LQ KA++ +PR + + ++C
Sbjct: 886 ERAFVAIESHYMSSSILSSSLQSKKAKDNAPRARALSTSC 925
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 29.1 bits (62), Expect = 2.4
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Frame = +3
Query: 240 PPVI-LQS*KYHGEDFYCNQMPQTVPRSGCSPPSAS-----QGERAVPTSPADLQH-LLR 398
PPV+ +QS +++Y NQ TVP S +P + S G ++VPTSP + ++
Sbjct: 139 PPVLNMQS----NQNWYMNQPSGTVPMSSNAPATTSSATPDSGIQSVPTSPPSPSYAMMN 194
Query: 399 LLGASSPPESMLHSPPNLHTKPP--PPYPEDNNFLDRLYDFEGYPTPSPSSDEGSIPTV 569
+ + P T P P ED++ D EG P P++ +I T+
Sbjct: 195 DVDIGDHDDEEDDDGPADFTDMPLLKPVDEDDDCYDVPCTSEG---PPPNNSNPAITTI 250
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 274 ERIFIAIRCHKPCRGPGAARLQHHKARELSPRLQLIYSTC 393
ER F+AI H ++ LQ KA++ +PR + + ++C
Sbjct: 886 ERAFVAIESHYMSSSILSSSLQSKKAKDNAPRARALSTSC 925
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 28.7 bits (61), Expect = 3.2
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +3
Query: 213 PGETGKASGPPVILQS*KYHGEDFYCNQMPQTVPRSGCSPPSASQGERAVPTSPADLQHL 392
P E KA P V ++ K +D P + P P A +PT+P ++
Sbjct: 466 PLEMFKAP-PKVEIEKEKEKDKDEDDGAQPSSAPVHTPPAPPAIPSPAKLPTAPPPVEKP 524
Query: 393 LRLLGASSPPESMLHSP-PNLHTKPPPPYPEDNNFL 497
+ ++SP S + SP P L KP P F+
Sbjct: 525 VTPSPSASPLPSPVSSPAPQLVQKPTTPTDASKPFV 560
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 441 PPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSP 539
PP+ +T+PPPP P+ + + G TP P
Sbjct: 99 PPHYYTQPPPP-PQSGYYHHQQQQHSGPTTPVP 130
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 309 VPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPY 476
VP + S + + RAVP++ +D + LL+ HS P L+ K PP+
Sbjct: 25 VPSTNNSTEALTLSPRAVPSTVSDRRFLLKACKFMDQVVKSCHS-PRLNLKNSPPF 79
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 309 VPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPY 476
VP + S + + RAVP++ +D + LL+ HS P L+ K PP+
Sbjct: 25 VPSTNNSTEALTLSPRAVPSTVSDRRFLLKACKFMDQVVKSCHS-PRLNLKNSPPF 79
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 4.2
Identities = 24/97 (24%), Positives = 34/97 (35%), Gaps = 4/97 (4%)
Frame = +3
Query: 303 QTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLH---SPPNLHTKPPPP 473
Q P S P + +R T + ++SP S S P+ +T P
Sbjct: 327 QATPSSSVIPTTTQTTQRPTSTGIPSTVSTSQGTSSTSPIPSTTQTSSSAPSTYTSNFTP 386
Query: 474 YPEDNNFLDRLY-DFEGYPTPSPSSDEGSIPTVALQP 581
P + +G PT S SS S PT + P
Sbjct: 387 SPTTTLLTSTIAPSTQGVPTSSKSSSPNSTPTTTITP 423
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 4.2
Identities = 23/72 (31%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Frame = +3
Query: 273 GEDFYCNQMPQT--VPRSGCSPPSASQ-GERAVPTSPADLQHLLRLLGASSPPESMLHSP 443
G Y + PQ P G PP G R P P H PP M P
Sbjct: 1540 GPSQYYHDSPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSH------CQGPPPLMGGPP 1593
Query: 444 PNLHTKPPPPYP 479
P L PP P P
Sbjct: 1594 PRLGMPPPGPPP 1605
>Z48582-1|CAA88465.1| 490|Caenorhabditis elegans Hypothetical
protein F27E5.3 protein.
Length = 490
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 300 PQTVPRSGCSP--PSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPP 473
P TV SG S + S G PT+ ++ ++ +S +LHSPP+ P P
Sbjct: 288 PSTVTTSGPSTVDTTGSSGNSTDPTTRSNTSNVPSGTSEASITNPILHSPPSKFDNIPSP 347
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +3
Query: 429 MLHSPPNLHT--KPPPPYPEDNN 491
M SPP ++ +PPPPY E NN
Sbjct: 1 MPESPPPSYSPRRPPPPYEEQNN 23
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +3
Query: 285 YCNQMPQTVPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKP 464
Y + P T P+ PPS P PA++ PP + +P ++ P
Sbjct: 461 YSSTTPPTTPKPAPPPPSRIPNPSPSP-QPAEVSKS----PPPPPPLPPIATPSSVPPPP 515
Query: 465 PPPYP 479
PPP P
Sbjct: 516 PPPPP 520
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 327 SPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPY 476
S S+ G D +H G+SS E H PP PPP Y
Sbjct: 445 STTSSGTGSPVYKVCIIDSEHRGNAPGSSSDSEPDHHCPPPHRHSPPPAY 494
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 327 SPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPPY 476
S S+ G D +H G+SS E H PP PPP Y
Sbjct: 445 STTSSGTGSPVYKVCIIDSEHRGNAPGSSSDSEPDHHCPPPHRHSPPPAY 494
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 27.9 bits (59), Expect = 5.6
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = -2
Query: 489 YYPLDMVAEVLCVGSVESGAWILAATRPLINGAGAVDQLETWGQLSRLVMLKAGCTRTAA 310
++ L M+ +LCV + AW A +I GAG +E G G +AA
Sbjct: 492 HWSLSMIGAILCVAVMFISAWHFALF-AIIIGAGVYKYIEYAGAEKEWGDGLRGLGLSAA 550
Query: 309 RFVASDCNKNP 277
RF + + P
Sbjct: 551 RFALLNLDDKP 561
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +3
Query: 459 KPPPPYPEDNNFLDRLY---DFEGYPTPSPS 542
KPPP YPE +F R + YP P PS
Sbjct: 212 KPPPMYPETASFPHRKIRSGAYSLYPPPQPS 242
>Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical
protein C34E11.2 protein.
Length = 677
Score = 27.5 bits (58), Expect = 7.4
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +3
Query: 309 VPRSGCSPPSASQGERAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPP 470
+PRS S P+A Q + +P + SPP M PP L P P
Sbjct: 454 LPRSFSSTPAAEQFLPTLEGAPVWTPSAVSTASELSPPIPMSSPPPPLPRTPQP 507
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 354 RAVPTSPADLQHLLRLLGASSPPESMLHSPPNLHTKPPPP 473
+A P P L+ +L + PP PP L PPPP
Sbjct: 64 KATPPPPPPPPPLISILQQAPPPPPP-PPPPTLKAPPPPP 102
>Z32673-1|CAA83585.1| 472|Caenorhabditis elegans transcription
factor protein.
Length = 472
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +3
Query: 414 SPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSPSSDEGSIPTVALQP 581
+PP + + +P +++T PP + + +D++ SPSS E + + P
Sbjct: 100 TPPRTAVSTPTSINTPVPPHQNKQRHSIDKIAANLSTKKVSPSSIEKQLQRTSHNP 155
>U41535-12|AAK67251.1| 438|Caenorhabditis elegans Abnormal cell
lineage protein 26 protein.
Length = 438
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +3
Query: 414 SPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSPSSDEGSIPTVALQP 581
+PP + + +P +++T PP + + +D++ SPSS E + + P
Sbjct: 66 TPPRTAVSTPTSINTPVPPHQNKQRHSIDKIAANLSTKKVSPSSIEKQLQRTSHNP 121
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -1
Query: 388 CCRSAGDVG-TALSPCDAEGGLHPD 317
CC G T+L+ CD+EG H D
Sbjct: 169 CCEDMCSAGQTSLTVCDSEGNTHTD 193
>AL117203-10|CAB60424.2| 855|Caenorhabditis elegans Hypothetical
protein Y48C3A.14 protein.
Length = 855
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3
Query: 96 CLVTTES*LLLSC*VSFGGARAAVSKSHPSWLSLCSPTCPGETGKASG 239
C + S + C GG ++SHP W C+ CP G G
Sbjct: 707 CQYSISSNGVCGCLQDCGGVMLLDTQSHPKWRMTCN-KCPSVVGLFEG 753
>AJ130957-1|CAA10262.1| 438|Caenorhabditis elegans LIN-26B protein.
Length = 438
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +3
Query: 414 SPPESMLHSPPNLHTKPPPPYPEDNNFLDRLYDFEGYPTPSPSSDEGSIPTVALQP 581
+PP + + +P +++T PP + + +D++ SPSS E + + P
Sbjct: 66 TPPRTAVSTPTSINTPVPPHQNKQRHSIDKIAANLSTKKVSPSSIEKQLQRTSHNP 121
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 384 QHLLRLLGASSPPESMLHSPPNLHTKPP 467
+H L G S+ P + LH P+ + KPP
Sbjct: 43 RHPLTTRGRSATPPATLHGHPSQNNKPP 70
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 384 QHLLRLLGASSPPESMLHSPPNLHTKPP 467
+H L G S+ P + LH P+ + KPP
Sbjct: 43 RHPLTTRGRSATPPATLHGHPSQNNKPP 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,148,165
Number of Sequences: 27780
Number of extensions: 345581
Number of successful extensions: 1666
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1607
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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