Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6a08
(668 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 129 3e-32
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 129 3e-32
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 99 3e-23
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.6
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.6
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 22 4.6
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 22 4.6
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 8.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 8.0
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 129 bits (311), Expect = 3e-32
Identities = 53/124 (42%), Positives = 85/124 (68%)
Frame = +3
Query: 297 EKKAFEDIEGAPERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGGGAFLIPYIIVL 476
+ AF++I+ P+R MWS++IEF++S + ++GLGN+WRFP++ Y+NGGGAF++PY I L
Sbjct: 6 QSSAFKEIKTLPDRGMWSSKIEFILSVVGLAIGLGNLWRFPYLCYKNGGGAFMVPYFIAL 65
Query: 477 FLVGKPMYYLECVLGQFSSRNSVKVWSLSPAMKGTGYAQALGCGYILSYYVVIVGLCLYY 656
L G PM+ +E LGQ + + V+ ++P KG GYA + + YY++I+ L+Y
Sbjct: 66 ALAGVPMFLMELSLGQMMTIGGLGVFKIAPIFKGIGYATCVLSCWTNIYYIIILAWALFY 125
Query: 657 LSMS 668
L +S
Sbjct: 126 LLVS 129
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 129 bits (311), Expect = 3e-32
Identities = 53/124 (42%), Positives = 85/124 (68%)
Frame = +3
Query: 297 EKKAFEDIEGAPERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGGGAFLIPYIIVL 476
+ AF++I+ P+R MWS++IEF++S + ++GLGN+WRFP++ Y+NGGGAF++PY I L
Sbjct: 59 QSSAFKEIKTLPDRGMWSSKIEFILSVVGLAIGLGNLWRFPYLCYKNGGGAFMVPYFIAL 118
Query: 477 FLVGKPMYYLECVLGQFSSRNSVKVWSLSPAMKGTGYAQALGCGYILSYYVVIVGLCLYY 656
L G PM+ +E LGQ + + V+ ++P KG GYA + + YY++I+ L+Y
Sbjct: 119 ALAGVPMFLMELSLGQMMTIGGLGVFKIAPIFKGIGYATCVLSCWTNIYYIIILAWALFY 178
Query: 657 LSMS 668
L +S
Sbjct: 179 LLVS 182
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 99.1 bits (236), Expect = 3e-23
Identities = 42/91 (46%), Positives = 61/91 (67%)
Frame = +3
Query: 396 LGNVWRFPFVAYQNGGGAFLIPYIIVLFLVGKPMYYLECVLGQFSSRNSVKVWSLSPAMK 575
L NVWRFP++ Y+NGGGAFLIPY + L L G PM+++E LGQ + + V+ ++P K
Sbjct: 1 LANVWRFPYLCYKNGGGAFLIPYFLTLVLAGIPMFFMELALGQMLTVGGLGVFKIAPLFK 60
Query: 576 GTGYAQALGCGYILSYYVVIVGLCLYYLSMS 668
G GYA A+ ++ YY+VI+ ++Y MS
Sbjct: 61 GIGYAAAVMSCWMNVYYIVILAWAIFYFFMS 91
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 2.6
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = -3
Query: 363 IQFD*TTSYVQEHLLYLRKPSFH*LEPSVPEEVDQVLWIASAWVILDDSMTGPCPSED 190
I FD S L L F ++ SV EVDQ+ W+ S I D G C D
Sbjct: 227 IDFDRMNSLGLSWLDQLTNLGFLGMKESV--EVDQLSWLGSGQYISD--FVGSCRKTD 280
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 2.6
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = -3
Query: 363 IQFD*TTSYVQEHLLYLRKPSFH*LEPSVPEEVDQVLWIASAWVILDDSMTGPCPSED 190
I FD S L L F ++ SV EVDQ+ W+ S I D G C D
Sbjct: 265 IDFDRMNSLGLSWLDQLTNLGFLGMKESV--EVDQLSWLGSGQYISD--FVGSCRKTD 318
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 489 KPMYYLECVLGQFS 530
KP Y EC+L QF+
Sbjct: 58 KPQRYNECILKQFN 71
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 489 KPMYYLECVLGQFS 530
KP Y EC+L QF+
Sbjct: 58 KPQRYNECILKQFN 71
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 138 INMSQTHVNNGFDMSSENPPTDRDPSLNRP 227
INM Q NN ++ T P+L+ P
Sbjct: 5 INMDQEKKNNVENLKGGGSTTPASPTLSTP 34
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = -2
Query: 274 GGGRSGFVDRFGLGDPGRFNDGSLSVGGFSEDMSN 170
G G + D G + + S+GG + D+S+
Sbjct: 454 GNGTKLIIKNVDYADTGAYMCQASSIGGITRDISS 488
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,849
Number of Sequences: 438
Number of extensions: 5200
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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