Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6a07
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0262 + 21771577-21772059,21772167-21773252 35 0.063
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 32 0.45
11_01_0345 + 2579602-2579836,2581262-2581484,2582822-2583173,258... 31 0.78
11_01_0800 - 7047425-7048253,7048340-7048927,7049050-7049268,704... 30 1.4
08_02_1198 + 25204896-25206755 30 1.8
02_04_0412 + 22674903-22674969,22675179-22675519 30 1.8
02_02_0503 + 11008475-11008793,11009983-11010140,11011863-110121... 30 1.8
06_03_1265 + 28847782-28849803 29 2.4
10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,541... 29 3.1
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 29 3.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 4.1
07_03_0100 + 13389899-13390219,13390723-13390841,13391220-133913... 29 4.1
06_01_0598 + 4324129-4326150 29 4.1
03_02_0815 + 11477618-11477845,11478206-11478337,11480227-114804... 29 4.1
01_06_0296 + 28282779-28283254,28283462-28283558,28286377-282864... 29 4.1
07_01_0516 - 3850252-3852870 28 5.5
03_02_0209 + 6423962-6424159,6424360-6424569 28 5.5
10_06_0102 + 10758601-10758948,10759051-10759257,10759349-107595... 28 7.2
08_02_0980 + 23255992-23256408,23256480-23256517,23256606-232566... 28 7.2
05_06_0258 + 26730904-26731239 28 7.2
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 28 7.2
03_03_0040 - 13999040-13999179,13999524-13999638,13999759-139998... 28 7.2
11_04_0425 - 17522818-17522822,17522860-17522971,17523267-17523584 27 9.6
09_03_0085 - 12209697-12210457,12212823-12213255 27 9.6
05_01_0169 - 1170614-1172098 27 9.6
04_04_0111 - 22842337-22842648,22843008-22843402,22843732-228440... 27 9.6
03_05_0883 + 28483429-28484385,28485090-28485398 27 9.6
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 27 9.6
>11_06_0262 + 21771577-21772059,21772167-21773252
Length = 522
Score = 34.7 bits (76), Expect = 0.063
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 335 IMVYWTSMVYMVTYIPLIFPASWLLDKAGLRVTTILGAFGTCAGAWLKVFSVPQDMFWLG 514
++ +TS +Y+ + + ASW+ G R + ILG F AGA + +V M LG
Sbjct: 89 LLTLFTSSLYISGLLTAVLLASWVTASRGRRASMILGGFAYIAGAAVSGAAVNVSMAILG 148
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/82 (30%), Positives = 30/82 (36%)
Frame = -1
Query: 590 TTRPPAAEVRLG*TPARWPPPFDPRSPARTCLGARRTPSAMLRRRYRTHQVSLSPADPLY 411
TT PP A V P P P+ SP T + PS L + ADP
Sbjct: 110 TTTPPTAPVPAAAPPPTAPSPYSAPSPTPTPTHTQPRPSPPLL------PTPATAADPAN 163
Query: 410 PRAS*PERSGVYKSPCRPLRSN 345
P + S SP P R+N
Sbjct: 164 PNKARHPSSNKSSSPAAPRRTN 185
>11_01_0345 +
2579602-2579836,2581262-2581484,2582822-2583173,
2583894-2584125,2584683-2585266
Length = 541
Score = 31.1 bits (67), Expect = 0.78
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +2
Query: 242 IFVFYSASNAFQWVQYSIIQDTVVKYYGVPSIMVYWTSMVYMVTY--IPLIFPASWLLDK 415
+FVFY +NA + +Y D + W ++V++ + + L F W
Sbjct: 372 LFVFYMVANAVVYRRYVAADDDDADHRRA------WPTLVFLAAFSLVALCFTLLWQFAP 425
Query: 416 AGLRVTTILGAFGTCAGAWLKVF 484
AG T +L A G A A + F
Sbjct: 426 AGRARTGLLAACGAAAVATVGAF 448
>11_01_0800 -
7047425-7048253,7048340-7048927,7049050-7049268,
7049398-7049518,7050593-7050983
Length = 715
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 484 LRAPRHVLAGLRGSNGGGHLAGVHPKRTSAA---GGRVV--WGPIKCRPLAVSAFSV 639
L +PRH+L G+ NG GHL ++ + ++ G +++ W + CR L V SV
Sbjct: 193 LESPRHLLHGIVHENGFGHLVRINGREGGSSVMTGSQLINFWDRL-CRYLRVRKVSV 248
>08_02_1198 + 25204896-25206755
Length = 619
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 580 RQPRRYV*DEHLRDGHHRLTHEAQPEHVLGHGE 482
RQP + +EH H+R H+ QP VL E
Sbjct: 340 RQPTAQIREEHTSSRHNRGRHDQQPNQVLPSNE 372
>02_04_0412 + 22674903-22674969,22675179-22675519
Length = 135
Score = 29.9 bits (64), Expect = 1.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 504 SGWASWVKRWWPSRRCSS 557
+GW+ W WW RRC S
Sbjct: 98 AGWSGWNNVWWFDRRCPS 115
>02_02_0503 +
11008475-11008793,11009983-11010140,11011863-11012102,
11013502-11013757,11013846-11014057,11014413-11014453,
11014531-11014567
Length = 420
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 548 PARWPPPFDPRSPARTCLGARRTP 477
PA PPP P SPA RRTP
Sbjct: 28 PASSPPPSPPPSPAAAAAAPRRTP 51
>06_03_1265 + 28847782-28849803
Length = 673
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 340 HNTWNSVVFHDRILNDAVLNPLEGIRSGIKNENK 239
H +W F+D++L DAVLN ++ + + + +K
Sbjct: 443 HRSWRKETFNDKMLVDAVLNIVKALEANFEAWSK 476
>10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,
5416037-5418047
Length = 1369
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 586 HGRQPRRYV*DEHLRDGHHRLTHEAQPEHVLGHGEHLQPCSGAGTERTKY 437
H P + V D +RDG R EA V+ GE L+ C G T+ T +
Sbjct: 893 HNIFPGKEVQDLDVRDGRIREADEAYQGLVMAAGEGLRICLGFLTDMTPF 942
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 550 HLRDGHHRLTHEAQPEHVLGHGEHLQPCSGAGTERTKYRCHP 425
H + HHR H+ + H HG+H G +R ++ HP
Sbjct: 530 HQKGRHHRHHHDHRHRHGHSHGDHHHHYHGGHHQRRRHH-HP 570
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 4.1
Identities = 32/107 (29%), Positives = 39/107 (36%), Gaps = 8/107 (7%)
Frame = -1
Query: 596 PQTTRPPAAEVRLG*T-PARWPPPFDPRSPARTCLGARRT-------PSAMLRRRYRTHQ 441
P PP +G PA PPP PRS +RT GA + P L RT+
Sbjct: 646 PNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNG 705
Query: 440 VSLSPADPLYPRAS*PERSGVYKSPCRPLRSNKP*YLELRSISRPYP 300
+ A P P RS +P PL P R+ P P
Sbjct: 706 PGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPP 752
>07_03_0100 +
13389899-13390219,13390723-13390841,13391220-13391315,
13391481-13391553,13392055-13392123
Length = 225
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = -1
Query: 512 PARTCLGARRTPSAMLRRRYRTHQVSLSPADPLYPRAS*PERSGVYKSPCRPLRSNKP*Y 333
P + + ARR+PS RRRYR + P L+ + P PCR R P
Sbjct: 19 PPLSRVNARRSPSLDQRRRYRAS--TAGPPQSLHASSRVPAARHRIVCPCR-RRGGSPSL 75
Query: 332 LELRSISRPYP 300
S +P P
Sbjct: 76 TRRSSPEKPGP 86
>06_01_0598 + 4324129-4326150
Length = 673
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 128 VSGSVMDGITEKGMALDSPSKKGNVEYIAYPIRWLVLFIFVFYSASNAFQWVQYSIIQ 301
+SGS+ +GI E+G+ L + ++ NV Y + VL + +W+ S+I+
Sbjct: 195 LSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTM-VSVLAACAMLGGLHQGRWIHGSVIK 251
>03_02_0815 +
11477618-11477845,11478206-11478337,11480227-11480408,
11480500-11480662,11481480-11481794
Length = 339
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 570 RGWRPCGLGADQVSSACSIGVFG 638
RG+ P G G + V ACS+GV G
Sbjct: 30 RGFPPYGGGGNHVRRACSVGVVG 52
>01_06_0296 +
28282779-28283254,28283462-28283558,28286377-28286462,
28286953-28287034,28287506-28287633,28289727-28289784,
28290049-28290150,28290822-28290856,28291037-28291094
Length = 373
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 472 AEGVLRAPRHVLAGLRGSNGGGHLAGVHPKRTSAAGGRVVWGPIK 606
AE +L AP H LA R GG +A + GG P+K
Sbjct: 30 AELMLEAPGHFLADARALRAGGRIAALGADEDLELGGLYAAFPMK 74
>07_01_0516 - 3850252-3852870
Length = 872
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 530 PFDPRSPA-RTCLGA-RRTPSAMLRRRYRTHQVSLSPADP 417
PF P + R+CL + R P+ +RR H ++L P DP
Sbjct: 666 PFKPSALVWRSCLDSCNRQPNMTMRRLAMRHLLALEPQDP 705
>03_02_0209 + 6423962-6424159,6424360-6424569
Length = 135
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = -1
Query: 587 TRPPA--AEVRLG*TPARWPPPFDPRSPA-RTCLGARR---TPSAMLRRR 456
TR PA A +G A P P PR+PA R C ARR P+A RRR
Sbjct: 15 TRAPAGAAAAWVGVAAATAPAPALPRAPARRRCQMARRRKARPAARARRR 64
>10_06_0102 +
10758601-10758948,10759051-10759257,10759349-10759507,
10759617-10759709,10759913-10760008,10760457-10760724,
10760805-10761047,10761298-10761422,10761499-10761615,
10761705-10761779,10761886-10761942,10762035-10762139,
10762244-10762330,10762790-10763047,10763075-10763263,
10763418-10763528,10763640-10763729,10763814-10763990,
10764075-10764152,10764412-10764726,10764819-10765162,
10765304-10765541,10765631-10765998,10766106-10766316,
10766622-10766801,10766886-10769045,10769151-10769207
Length = 2251
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +2
Query: 485 SVPQDMFWLGFVGQTVVAISQVFILNVPPRLAAVWFGGRSSV 610
S+P++M+ V T A++ ++ P + A W GG +
Sbjct: 195 SIPEEMYRSACVSTTEEAVASCQVVGYPAMIKASWGGGGKGI 236
>08_02_0980 +
23255992-23256408,23256480-23256517,23256606-23256654,
23256787-23256848,23256876-23256938,23256939-23257599
Length = 429
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 505 LAGLRG-SNGGGHLAGVHPKRTSAAGGRVVWG 597
+AG R S+GGG LAG R GG +WG
Sbjct: 73 VAGAREQSDGGGRLAGAREGR-GGGGGSQIWG 103
>05_06_0258 + 26730904-26731239
Length = 111
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 460 RRSMAEGVLRAPRHVLAGLRGSNGGGHLAGVHPKRTSAAG 579
RRS + G++ RH+ ++ ++GGG A +R+ +AG
Sbjct: 12 RRSGSSGLVWDDRHLSGEIKPADGGGGGAAARVERSRSAG 51
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = -2
Query: 595 PKPHGRQPRRYV*DEHLRDGHHRLTHEAQPEH 500
P PH R P + H HH H P H
Sbjct: 27 PPPHLRHPHHHPPHHHPHPPHHHPPHHPHPPH 58
>03_03_0040 -
13999040-13999179,13999524-13999638,13999759-13999818,
14000007-14000060,14000274-14000333,14000418-14000480,
14000552-14000595,14000671-14000755,14000904-14001028,
14001368-14001432,14001460-14001518,14001678-14001743,
14001870-14001935,14002019-14002105,14002168-14002257,
14002378-14002440,14003153-14003419
Length = 502
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 368 VTYIPLIFPASWLLDKAGLRVTTILGAFGTCAGAWL 475
+ IP+ + L+DK+G RV ++ A GT G +L
Sbjct: 337 IIQIPITLFGAILMDKSGRRVLLMVSASGTFLGCFL 372
>11_04_0425 - 17522818-17522822,17522860-17522971,17523267-17523584
Length = 144
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 490 HGEHLQPCSGAGTERTKYRCHPQTRFIQEPASRKDQG 380
HGE +P E R P+ R + EP R+++G
Sbjct: 67 HGEDRRPVHAGAPEADAARRSPRRRRVHEPHLRQEEG 103
>09_03_0085 - 12209697-12210457,12212823-12213255
Length = 397
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 448 VRYLRRSMAEGVLRAPRHVLAGLRGSNGGGHLAGVHPKRTSA-AGGRVVWGPIK 606
V+ L RS+ G L+ RH++ L + GG A + TSA AGG P K
Sbjct: 214 VKLLSRSLLAGALQPARHLMITLAAAAGGA--AANNAAGTSAGAGGSAAALPSK 265
>05_01_0169 - 1170614-1172098
Length = 494
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 559 KRTSAAGGRVVWGPIKCRP 615
+R A GR+VWG ++C P
Sbjct: 85 RRGGFAPGRLVWGKVRCHP 103
>04_04_0111 -
22842337-22842648,22843008-22843402,22843732-22844073,
22844154-22844282,22844402-22844514,22844596-22844667,
22844783-22844859,22844978-22845052,22845058-22845121,
22845332-22845403,22845496-22845628,22846859-22846961
Length = 628
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 620 ASGRHLIGPQTTRPPAAEVRLG*TPARWPPPFDPRSP 510
A+ + L GP TT+P G P PPPF+P +P
Sbjct: 201 ANNKDLCGPGTTKPCP-----GAPPFSPPPPFNPPTP 232
>03_05_0883 + 28483429-28484385,28485090-28485398
Length = 421
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -1
Query: 545 ARWPPPFDPRSPARTCLGARRTPSAMLRRRYRTHQVSLSPADPLYPRAS*PERSG 381
ARW P D + C + + + + RR +R S S + PR++ R+G
Sbjct: 28 ARWHCPADDAFLCQACDASVHSANPLARRHHRVRLPSASSSPASSPRSAAAPRAG 82
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 356 MVYMVTYIPLIFPASWLLDKAGLRVTTILGAFGTCAGAWL 475
M ++ IPL + L+D++G R ++ A GT G +L
Sbjct: 1250 MSFLSMKIPLTLFGALLMDRSGRRALLLVSASGTFLGCFL 1289
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,961,055
Number of Sequences: 37544
Number of extensions: 494597
Number of successful extensions: 1684
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1681
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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