Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6a07
         (641 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   1.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   1.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   1.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   2.5  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   3.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   5.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.7  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 207 TSRTPYAGWSCLFSFFIPLRMPS 275
           T R  Y  +S L SFFIPL + S
Sbjct: 191 TRRQGYVIYSSLGSFFIPLLLMS 213


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 207 TSRTPYAGWSCLFSFFIPLRMPS 275
           T R  Y  +S L SFFIPL + S
Sbjct: 191 TRRQGYVIYSSLGSFFIPLLLMS 213


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 207 TSRTPYAGWSCLFSFFIPLRMPS 275
           T R  Y  +S L SFFIPL + S
Sbjct: 191 TRRQGYVIYSSLGSFFIPLLLMS 213


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 349 PINHNTWNSVVFHDRILNDAVLNPLEGIRSGIKN 248
           PI+ + WN   F   + ND V + L  I + I N
Sbjct: 67  PIDVDRWNGKTFVTILRNDGVPSSLNVISNKIGN 100


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/41 (19%), Positives = 20/41 (48%)
 Frame = +2

Query: 332 SIMVYWTSMVYMVTYIPLIFPASWLLDKAGLRVTTILGAFG 454
           ++++  T++      I L+F   W+LD+    +  +   +G
Sbjct: 448 TMLIVLTALGLPTNDISLLFAVDWMLDRIRTSINVLGDGYG 488


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 159 KKEWL*IHRVKRE 197
           +KEWL +HR + E
Sbjct: 727 RKEWLYLHRARSE 739


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -2

Query: 409  QEPASRKDQGYISHHVDH*GPINHNTWNSVVFHDRILNDAVLNPLEGIR 263
            Q P +    G I  +  H  PI  + W SV   +     A+   L G+R
Sbjct: 1133 QPPPNTHSNGIIQGYKLHYEPILADMWRSVDEMEVRKTSALTTVLTGLR 1181


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -2

Query: 409  QEPASRKDQGYISHHVDH*GPINHNTWNSVVFHDRILNDAVLNPLEGIR 263
            Q P +    G I  +  H  PI  + W SV   +     A+   L G+R
Sbjct: 1129 QPPPNTHSNGIIQGYKLHYEPILADMWRSVDEMEVRKTSALTTVLTGLR 1177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,862
Number of Sequences: 438
Number of extensions: 5518
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)