Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6a06
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...   103   7e-24
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    25   1.6  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   2.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.8  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   4.8  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   4.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.4  

>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score =  103 bits (246), Expect = 7e-24
 Identities = 49/89 (55%), Positives = 62/89 (69%)
 Frame = +3

Query: 384 LKVTTLPALIGMLLTGILFQNFGLVTMTDEYRKLNQDLRKLALVIILTRAGLGLDAKVLK 563
           + +TTLP LIGML+ GILFQN G V +  E++ +  +LRKLALVIIL RAGL +D    K
Sbjct: 197 ISLTTLPRLIGMLMVGILFQNVGWVNLDGEFQIVTAELRKLALVIILIRAGLEMDPTAFK 256

Query: 564 KHYAAVLQLGLLPWLVECIAIAVTTHYLL 650
           K Y  +L+LGL+PW VEC  IAV   + L
Sbjct: 257 KIYKTILKLGLIPWFVECSLIAVCARFFL 285



 Score = 44.8 bits (101), Expect = 2e-06
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = +3

Query: 231 WWQKFCLRFHQPDSTPSWKPKWWTRFFPFPLFSTYRQSALKICFILFCWIWLKVTTLPAL 410
           W    C+R     +TPSW+P  W +  P+PL  +YRQ A +I  I+   + L +T    +
Sbjct: 112 WIYSLCMRCRVEYTTPSWEPPGWQKVCPYPLCPSYRQFA-RILSIILIGVLLWITAF-VI 169

Query: 411 IG 416
           IG
Sbjct: 170 IG 171


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 415 PIRAGNVVTLSQIQQNKIKQIFRADCLYVENKGNGKNRVHHLGFQEG 275
           P   GN +  +Q+Q  + + I  A C      GNG N +   G + G
Sbjct: 96  PQSNGNPLQQTQVQPQQQQPIVYASCKLQAAVGNGPNGLGTYGTENG 142


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +2

Query: 386 QSH--YVTGPDWHVTDRNTFPKFRTRNYD 466
           QSH  +V  P W   D++ F   ++RN+D
Sbjct: 212 QSHKEWVPQPQWLEEDQHVFHVVKSRNFD 240


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +2

Query: 386 QSH--YVTGPDWHVTDRNTFPKFRTRNYD 466
           QSH  +V  P W   D++ F   ++RN+D
Sbjct: 212 QSHKEWVPQPQWLEEDQHVFHVVKSRNFD 240


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = +3

Query: 351 KICFILFCWIWLKVTTLPALIGMLLTGILFQNFGLVTMTD 470
           K+  I+FC ++  +  L     +L+  ++F+N  + T+T+
Sbjct: 92  KLVQIVFCVLYSSIFVLGVFGNVLVCYVVFRNKAMQTVTN 131


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 229 NGGRNFVCVFINRTRHPPGNLSGGRGFSRFLYSQ 330
           NG     CV I RT      ++G +GF   +Y++
Sbjct: 63  NGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYAR 96


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 5/33 (15%)
 Frame = +2

Query: 368  ILLDLAQSHYVTGPDWHVTD-----RNTFPKFR 451
            +L+D  +SH +  P+W+V D     R+ +P+ R
Sbjct: 2076 VLVDY-KSHQILNPNWYVRDLYFFKRSQYPQLR 2107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,263
Number of Sequences: 2352
Number of extensions: 12450
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)