Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5p24
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 186 1e-47
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 186 1e-47
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 135 2e-32
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 123 8e-29
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 110 6e-25
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 43 1e-04
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 43 1e-04
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 43 1e-04
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF039710-6|AAB96688.1| 392|Caenorhabditis elegans Hypothetical ... 33 0.20
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 32 0.26
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 32 0.26
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 32 0.26
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 32 0.34
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 32 0.34
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 29 3.2
U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical p... 28 4.2
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 28 4.2
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 28 5.6
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 28 5.6
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 28 5.6
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 28 5.6
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 28 5.6
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 5.6
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 28 5.6
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 28 5.6
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 5.6
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 28 5.6
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 28 5.6
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 28 5.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical pr... 27 7.4
U96695-1|AAB57697.1| 491|Caenorhabditis elegans deoxyuridinetri... 27 7.4
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 27 7.4
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 27 7.4
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 27 7.4
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 27 7.4
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 27 7.4
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 27 7.4
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 27 7.4
Z93386-2|CAB07647.1| 387|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 27 9.7
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 27 9.7
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 27 9.7
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 27 9.7
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 27 9.7
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 27 9.7
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 27 9.7
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 27 9.7
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 27 9.7
AF098993-2|AAC67466.1| 549|Caenorhabditis elegans Hypothetical ... 27 9.7
AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical... 27 9.7
AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical... 27 9.7
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 186 bits (453), Expect = 1e-47
Identities = 90/171 (52%), Positives = 126/171 (73%), Gaps = 1/171 (0%)
Frame = +2
Query: 50 RAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCK 229
RA K+GI EAQ +I+ KY+ +A E L+W++ +TG+ +T GDADNL +V +DG+LLC
Sbjct: 9 RAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCT 68
Query: 230 LVNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 409
L N L+PGSVKK+N + MAFK MENI+ FL+ ++ V E FQT+DL+E Q+ +V++
Sbjct: 69 LANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLI 127
Query: 410 CLQSLGRKA-GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG 559
CL SL RK+ NFG+ +GPKEA + R++++EQLKAG NVI LQ G+NKG
Sbjct: 128 CLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKG 178
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 186 bits (453), Expect = 1e-47
Identities = 90/171 (52%), Positives = 126/171 (73%), Gaps = 1/171 (0%)
Frame = +2
Query: 50 RAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCK 229
RA K+GI EAQ +I+ KY+ +A E L+W++ +TG+ +T GDADNL +V +DG+LLC
Sbjct: 9 RAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCT 68
Query: 230 LVNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 409
L N L+PGSVKK+N + MAFK MENI+ FL+ ++ V E FQT+DL+E Q+ +V++
Sbjct: 69 LANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLI 127
Query: 410 CLQSLGRKA-GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG 559
CL SL RK+ NFG+ +GPKEA + R++++EQLKAG NVI LQ G+NKG
Sbjct: 128 CLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKG 178
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 135 bits (327), Expect = 2e-32
Identities = 66/134 (49%), Positives = 89/134 (66%)
Frame = +2
Query: 50 RAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCK 229
R GI + + SK+ D+ A LEWI+KL+GE +TSG+ DN + +LKDGTLLCK
Sbjct: 4 RTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLCK 63
Query: 230 LVNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 409
N ++ GS+KK+ + F CMENINAF+E KK GVP +ETFQ+++L E ++L+SV V
Sbjct: 64 AANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVCV 123
Query: 410 CLQSLGRKAGNFGK 451
L SLGR GK
Sbjct: 124 TLLSLGRVLQKAGK 137
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 123 bits (297), Expect = 8e-29
Identities = 69/144 (47%), Positives = 87/144 (60%)
Frame = +2
Query: 53 AGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCKL 232
AG AG + QA SK+ND A LEWIR LT E + DN E LKDG LCKL
Sbjct: 11 AGMAGAILDKQA---SKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLCKL 67
Query: 233 VNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVC 412
VN ++ GSVKKI + F C+ENIN F A + LGV +ETFQ++DL++ ++L+SV V
Sbjct: 68 VNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVTVT 127
Query: 413 LQSLGRKAGNFGKPSIGPKEADKN 484
LQSL RK G PK+ K+
Sbjct: 128 LQSLARKVEKLG--ITPPKQVSKD 149
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 110 bits (265), Expect = 6e-25
Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 10/181 (5%)
Frame = +2
Query: 65 GINAEAQARIHSKYNDEIAQETLEWIRKLTGE----PANTSGDADNLYEVLKDGTLLCKL 232
G++ E Q + +++ E A E L+WI +TGE T + ++ +LKDG +LCKL
Sbjct: 9 GLSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDGVMLCKL 68
Query: 233 VNELQPGSVKKINQTT-MAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 409
+ +L P N+ MAF MENI+ FL A K+ GV FQT+DL+E + Y V+
Sbjct: 69 IEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQCYKVIE 128
Query: 410 CLQSLG----RKAGNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNK-GQQSGI 574
CL+ L ++ + P+ K A + R F E ++ G+ VI LQYGTNK Q G+
Sbjct: 129 CLRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMRRGEMVIPLQYGTNKCASQKGM 188
Query: 575 S 577
S
Sbjct: 189 S 189
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +2
Query: 137 WIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSV--KKINQTTM--AFKCMEN 304
W+R + + +G VL+DG LLC+L N L P + KKI +T F C N
Sbjct: 14 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 73
Query: 305 INAFLEAVKK-LGVPAQETFQTIDLWERQNLYSVVVCLQSL 424
IN F K + + F DL+ V+ L L
Sbjct: 74 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 114
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +2
Query: 137 WIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSV--KKINQTTM--AFKCMEN 304
W+R + + +G VL+DG LLC+L N L P + KKI +T F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 305 INAFLEAVKK-LGVPAQETFQTIDLWERQNLYSVVVCLQSL 424
IN F K + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +2
Query: 137 WIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSV--KKINQTTM--AFKCMEN 304
W+R + + +G VL+DG LLC+L N L P + KKI +T F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 305 INAFLEAVKK-LGVPAQETFQTIDLWERQNLYSVVVCLQSL 424
IN F K + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 203 LKDGTLLCKLVNELQPGSVKKINQTTMAF---KCMENINAFLEAVKKLGVPAQETFQTID 373
L DG LCK +N+L P S+ + T + + N++ FL+ +K+GVP +D
Sbjct: 548 LSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVPETTLCSQMD 607
Query: 374 LWERQN 391
+ ++N
Sbjct: 608 IISKRN 613
>AF039710-6|AAB96688.1| 392|Caenorhabditis elegans Hypothetical
protein C46E10.3 protein.
Length = 392
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 546 PYCSDITF*PAFSCSSEKSRTFLSASLGPMDGLPKLPAFLP 424
P CS I F P+ + SS S + + L +D L K+P+F P
Sbjct: 229 PQCSVINFVPSLAISSLPSTSIPATILPKIDNLAKVPSFAP 269
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 188 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKK 334
+L+E + DG +L KL+ + + K N+ M + +EN+N L+ +KK
Sbjct: 74 DLFEDVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKK 122
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 188 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKK 334
+L+E + DG +L KL+ + + K N+ M + +EN+N L+ +KK
Sbjct: 74 DLFEDVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKK 122
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 188 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKK 334
+L+E + DG +L KL+ + + K N+ M + +EN+N L+ +KK
Sbjct: 74 DLFEDVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKK 122
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 31.9 bits (69), Expect = 0.34
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +2
Query: 104 YNDEIAQETL--EWIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSVKKINQT 277
+ DE AQ+ WI E ++SG ++L+E ++DG LLC L+ E+ G +++
Sbjct: 19 HEDEKAQKNTFTRWIN-FHLEEHSSSGRIEDLFEDIRDGVLLCHLI-EVLTGEALAVHKG 76
Query: 278 TMAFKC--MENINAFLEAVKKLGV 343
++ + + N+ L +++ G+
Sbjct: 77 RVSKRVHHIANLTTALTVLRRRGL 100
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 31.9 bits (69), Expect = 0.34
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +2
Query: 104 YNDEIAQETL--EWIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSVKKINQT 277
+ DE AQ+ WI E ++SG ++L+E ++DG LLC L+ E+ G +++
Sbjct: 19 HEDEKAQKNTFTRWIN-FHLEEHSSSGRIEDLFEDIRDGVLLCHLI-EVLTGEALAVHKG 76
Query: 278 TMAFKC--MENINAFLEAVKKLGV 343
++ + + N+ L +++ G+
Sbjct: 77 RVSKRVHHIANLTTALTVLRRRGL 100
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 28.7 bits (61), Expect = 3.2
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = -2
Query: 509 AAPRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPERARLAS 330
+APR + + P AR T RS P+ R V R + A+P + R+P AR A
Sbjct: 320 SAPRALTSRAPAGP-ARPTTTRSATPATRTAVPPRATAPPKAAPASKAPTRAPIPARSAP 378
Query: 329 *LPLGKRLCSP 297
P G +P
Sbjct: 379 APPRGAPAKAP 389
>U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical
protein C10G11.7 protein.
Length = 338
Score = 28.7 bits (61), Expect = 3.2
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Frame = +2
Query: 206 KDGTLLCKLVNELQPGSVK----KINQTTMAFKCME--NINAF-LEAVKKLGVPA 349
KDG +L KL N L+PG+V+ + N A K ++ NI+AF A K LG A
Sbjct: 162 KDGDVLAKLANALEPGAVEVAAAEENADAAAQKEVQKKNIDAFGAWAQKTLGTEA 216
>Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 28.3 bits (60), Expect = 4.2
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = +2
Query: 44 EYRAGKA--GINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGT 217
+Y G A G N +A ++HS + AQ WI KL E N+ GD+ Y ++ +
Sbjct: 451 KYSLGYAFRGGNKDAMLQLHSSETSD-AQPF--WIYKLGPEGKNSFGDSQYEYAIISNWV 507
Query: 218 LLCKLVNELQPGSVKKINQTTMAFKCMEN---INAFLEAVKKLGVPAQETFQTID 373
V P + K Q + + +E+ IN F+ A L T Q D
Sbjct: 508 KYPVTVLVRDPDTFKTKYQKEV-LRWLEDQGFINGFIRAFNLLQPAGYSTCQYAD 561
>Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 28.3 bits (60), Expect = 4.2
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = +2
Query: 44 EYRAGKA--GINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGT 217
+Y G A G N +A ++HS + AQ WI KL E N+ GD+ Y ++ +
Sbjct: 451 KYSLGYAFRGGNKDAMLQLHSSETSD-AQPF--WIYKLGPEGKNSFGDSQYEYAIISNWV 507
Query: 218 LLCKLVNELQPGSVKKINQTTMAFKCMEN---INAFLEAVKKLGVPAQETFQTID 373
V P + K Q + + +E+ IN F+ A L T Q D
Sbjct: 508 KYPVTVLVRDPDTFKTKYQKEV-LRWLEDQGFINGFIRAFNLLQPAGYSTCQYAD 561
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 28.3 bits (60), Expect = 4.2
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Frame = -2
Query: 530 SRSDRLSAA--PRRSRAHSCPPPWARWTACRSYLPSYRGTVDKR---PPSKGSASPKDQW 366
SRS R S + PRRSR+ + PP + R P R R PP + SPK++
Sbjct: 123 SRSPRYSRSRSPRRSRSRTRSPP----SRDRRDSPDRRDNSRSRSRSPPPREDGSPKERR 178
Query: 365 S-----GRSPERAR 339
S RSP R+R
Sbjct: 179 SRSRSASRSPSRSR 192
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 506 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 345
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 428 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 480
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 506 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 345
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 538 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 590
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 506 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 345
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1442 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1494
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 506 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 345
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1442 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1494
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 506 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 345
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1442 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1494
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 506 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 345
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1448 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1500
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 506 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 345
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1448 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1500
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 506 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 345
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1442 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1494
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 506 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 345
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1448 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1500
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 506 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 345
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1448 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1500
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 506 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 345
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 545 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 597
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 506 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 345
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 618 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 670
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.5 bits (58), Expect = 7.4
Identities = 29/79 (36%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = -2
Query: 536 AISRSDRLSAAPRRSRAHSCPPPWARWTACRSYLPSY-RGTVDKR--PPSKGSASPKDQW 366
A SRS A RRS + S PP R R PS R KR PP++ SP
Sbjct: 364 AKSRSKSPPARRRRSPSASKSPPAPR----RRRSPSKSRSPAPKREIPPARRRRSPSASK 419
Query: 365 SGRSPERARLAS*LPLGKR 309
S +P+RA+ S P R
Sbjct: 420 SPPAPKRAKSRSKSPPAPR 438
>Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical
protein K07A1.2 protein.
Length = 491
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 392 LYSVVVCLQSLGRKAGNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQ 541
+Y L++ R AG FG EA+ ++ EQ+K +++Q
Sbjct: 302 VYEAASELENTDRGAGGFGSTGQNTMEAEPALKKSKTEQIKTSATSVTIQ 351
>U96695-1|AAB57697.1| 491|Caenorhabditis elegans
deoxyuridinetriphosphatase protein.
Length = 491
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 392 LYSVVVCLQSLGRKAGNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQ 541
+Y L++ R AG FG EA+ ++ EQ+K +++Q
Sbjct: 302 VYEAASELENTDRGAGGFGSTGQNTMEAEPALKKSKTEQIKTSATSVTIQ 351
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 188 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVK 331
+LY ++DG +L +L+ L + K M C+EN+ L+ ++
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 188 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVK 331
+LY ++DG +L +L+ L + K M C+EN+ L+ ++
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -2
Query: 509 AAPRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPERARLAS 330
AAP+ R + PPP R+ LP + ++ PS+ + PK + R PE A +
Sbjct: 556 AAPQEPR-RATPPP----EPLRNELPKHSDLLNVSKPSEPAEPPKPSDAPREPEVAAAEA 610
Query: 329 *LP 321
+P
Sbjct: 611 VIP 613
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 188 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVK 331
+LY ++DG +L +L+ L + K M C+EN+ L+ ++
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 188 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVK 331
+LY ++DG +L +L+ L + K M C+EN+ L+ ++
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 188 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVK 331
+LY ++DG +L +L+ L + K M C+EN+ L+ ++
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 27.5 bits (58), Expect = 7.4
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 32 SDMAEYRAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKD 211
+DM G++G A+ E ++ EW++ L E ++S D+D EV+KD
Sbjct: 755 NDMISENGGESGDLESAREEAEGARTLEDGEQD-EWVKALLAEAESSSDDSDE--EVVKD 811
>Z93386-2|CAB07647.1| 387|Caenorhabditis elegans Hypothetical
protein R11H6.3 protein.
Length = 387
Score = 27.1 bits (57), Expect = 9.7
Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -2
Query: 572 CPTAGPC*CR--TVAISRS-DRLSAAPRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRP 402
C P CR TV +S DRL AAPRR + P R + C S S K P
Sbjct: 271 CVRGFPEACRAWTVLVSSIVDRLRAAPRRGSFLNSPSSSRRGSMCTSSQLSINDEAPKCP 330
Query: 401 PSKGSAS 381
SA+
Sbjct: 331 FMSKSAN 337
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 572 CPTAGPC*CRTVAISRSDRLSAAPRRSRAHSCPPPWARWTACRSYLPSYRG 420
CP C CR + +S L P+R CP A W++C + P Y G
Sbjct: 759 CPMEQRC-CRPMIVS----LGVNPQRC---VCPDKHAVWSSCGTLCPEYCG 801
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 572 CPTAGPC*CRTVAISRSDRLSAAPRRSRAHSCPPPWARWTACRSYLPSYRG 420
CP C CR + +S L P+R CP A W++C + P Y G
Sbjct: 550 CPMEQRC-CRPMIVS----LGVNPQRC---VCPDKHAVWSSCGTLCPEYCG 592
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 386 QNLYSVVVCLQSLGRKAGNFGKPSIGPKEADKN 484
QN++S VV + LG AG+F P I KN
Sbjct: 60 QNIWSFVVAVLFLGALAGSFSIPFIAEGVGRKN 92
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 27.1 bits (57), Expect = 9.7
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Frame = +2
Query: 266 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 436
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 218 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 277
Query: 437 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG 559
G G + + + E +K + +I Q G NKG
Sbjct: 278 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKG 318
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 27.1 bits (57), Expect = 9.7
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Frame = +2
Query: 266 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 436
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 426 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 485
Query: 437 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG 559
G G + + + E +K + +I Q G NKG
Sbjct: 486 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKG 526
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 27.1 bits (57), Expect = 9.7
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Frame = +2
Query: 266 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 436
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 235 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 294
Query: 437 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG 559
G G + + + E +K + +I Q G NKG
Sbjct: 295 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKG 335
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 27.1 bits (57), Expect = 9.7
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Frame = +2
Query: 266 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 436
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 218 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 277
Query: 437 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG 559
G G + + + E +K + +I Q G NKG
Sbjct: 278 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKG 318
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 27.1 bits (57), Expect = 9.7
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Frame = +2
Query: 266 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 436
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 235 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 294
Query: 437 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG 559
G G + + + E +K + +I Q G NKG
Sbjct: 295 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKG 335
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 27.1 bits (57), Expect = 9.7
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Frame = +2
Query: 266 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 436
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 405 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 464
Query: 437 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG 559
G G + + + E +K + +I Q G NKG
Sbjct: 465 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKG 505
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 27.1 bits (57), Expect = 9.7
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Frame = +2
Query: 266 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 436
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 426 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 485
Query: 437 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG 559
G G + + + E +K + +I Q G NKG
Sbjct: 486 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKG 526
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 27.1 bits (57), Expect = 9.7
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Frame = +2
Query: 266 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 436
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 235 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 294
Query: 437 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG 559
G G + + + E +K + +I Q G NKG
Sbjct: 295 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKG 335
>AF098993-2|AAC67466.1| 549|Caenorhabditis elegans Hypothetical
protein T10B11.2 protein.
Length = 549
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -2
Query: 500 RRSRAHSCPPPWA-RWTACRSYL--PSYRGTVDKRPPSKGSASPKDQ 369
R S + C P +W+A R+ + P YRG V K + +PKDQ
Sbjct: 336 RDSEEYRCLGPIRYQWSALRTTIRHPIYRGMVQFSLSHKENVNPKDQ 382
>AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical
protein Y47G6A.5b protein.
Length = 574
Score = 27.1 bits (57), Expect = 9.7
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 542 TVAISRSD-RLSAAPRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPK 375
T ++S +D R PRRS ++ PPP + S PS T K P+ S SP+
Sbjct: 21 TQSVSSTDPRPPIPPRRSESNLVPPPIPHHSGNISRHPS--ATSTKSVPNGASFSPR 75
>AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical
protein Y47G6A.5a protein.
Length = 618
Score = 27.1 bits (57), Expect = 9.7
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 542 TVAISRSD-RLSAAPRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPK 375
T ++S +D R PRRS ++ PPP + S PS T K P+ S SP+
Sbjct: 65 TQSVSSTDPRPPIPPRRSESNLVPPPIPHHSGNISRHPS--ATSTKSVPNGASFSPR 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,508,119
Number of Sequences: 27780
Number of extensions: 291149
Number of successful extensions: 1049
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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