BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5p17
(690 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094691-1|AAM11044.1| 450|Drosophila melanogaster GH08974p pro... 264 6e-71
AE014297-1394|AAO41545.1| 450|Drosophila melanogaster CG6950-PD... 264 6e-71
AE014297-1393|AAF54708.2| 450|Drosophila melanogaster CG6950-PC... 264 6e-71
AE014297-1392|AAF54707.2| 450|Drosophila melanogaster CG6950-PB... 264 6e-71
AE014297-1391|AAF54709.2| 450|Drosophila melanogaster CG6950-PA... 264 6e-71
AY069305-1|AAL39450.1| 501|Drosophila melanogaster HL07974p pro... 47 2e-05
AE014298-2024|AAF48363.1| 501|Drosophila melanogaster CG1461-PA... 47 2e-05
M80537-1|AAA28530.1| 5147|Drosophila melanogaster fat protein pr... 29 7.9
BT001671-1|AAN71426.1| 242|Drosophila melanogaster RE50216p pro... 29 7.9
AE014134-710|AAF51036.1| 5147|Drosophila melanogaster CG3352-PA ... 29 7.9
>AY094691-1|AAM11044.1| 450|Drosophila melanogaster GH08974p
protein.
Length = 450
Score = 264 bits (648), Expect = 6e-71
Identities = 128/212 (60%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Frame = +1
Query: 61 SSLSRSVKIEHFIRQLSVCRTMA--EKFRLPERYGAGEKSVWVEYIQLAAEYKPAVNLGQ 234
S+ RS++ + ++ L +T EKF LP+R SVW EYI LA +YKP +NLGQ
Sbjct: 10 SAAKRSLREQFQLQALRHQQTAIKMEKFDLPKRLQGSTPSVWNEYIALAMQYKP-LNLGQ 68
Query: 235 GFPDYHAPKHVTEALSQIATSENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEI 414
GFPD AP++VT +L+ IA +NPLLHQYTRG+G RLV LSK+YS L+G++++ ++I
Sbjct: 69 GFPDDAAPEYVTHSLADIAKEQNPLLHQYTRGYGHVRLVNALSKLYSGLVGKELNPLSDI 128
Query: 415 LVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGDDIS 594
L+TSGAYEALYSTI+GHVD GDEVIIIEP+FDCY+ MVK AGGVPRF+ LK + IS
Sbjct: 129 LITSGAYEALYSTIMGHVDVGDEVIIIEPFFDCYEPMVKMAGGVPRFVPLKLRKTEGPIS 188
Query: 595 SADWVLDEAELASLFNNRTKMIIVNTPHNPLG 690
SADWVLD+AE SLFN++TKMII+NTPHNP+G
Sbjct: 189 SADWVLDDAEFESLFNSKTKMIILNTPHNPIG 220
>AE014297-1394|AAO41545.1| 450|Drosophila melanogaster CG6950-PD,
isoform D protein.
Length = 450
Score = 264 bits (648), Expect = 6e-71
Identities = 128/212 (60%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Frame = +1
Query: 61 SSLSRSVKIEHFIRQLSVCRTMA--EKFRLPERYGAGEKSVWVEYIQLAAEYKPAVNLGQ 234
S+ RS++ + ++ L +T EKF LP+R SVW EYI LA +YKP +NLGQ
Sbjct: 10 SAAKRSLREQFQLQALRHQQTAIKMEKFDLPKRLQGSTPSVWNEYIALAMQYKP-LNLGQ 68
Query: 235 GFPDYHAPKHVTEALSQIATSENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEI 414
GFPD AP++VT +L+ IA +NPLLHQYTRG+G RLV LSK+YS L+G++++ ++I
Sbjct: 69 GFPDDAAPEYVTHSLADIAKEQNPLLHQYTRGYGHVRLVNALSKLYSGLVGKELNPLSDI 128
Query: 415 LVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGDDIS 594
L+TSGAYEALYSTI+GHVD GDEVIIIEP+FDCY+ MVK AGGVPRF+ LK + IS
Sbjct: 129 LITSGAYEALYSTIMGHVDVGDEVIIIEPFFDCYEPMVKMAGGVPRFVPLKLRKTEGPIS 188
Query: 595 SADWVLDEAELASLFNNRTKMIIVNTPHNPLG 690
SADWVLD+AE SLFN++TKMII+NTPHNP+G
Sbjct: 189 SADWVLDDAEFESLFNSKTKMIILNTPHNPIG 220
>AE014297-1393|AAF54708.2| 450|Drosophila melanogaster CG6950-PC,
isoform C protein.
Length = 450
Score = 264 bits (648), Expect = 6e-71
Identities = 128/212 (60%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Frame = +1
Query: 61 SSLSRSVKIEHFIRQLSVCRTMA--EKFRLPERYGAGEKSVWVEYIQLAAEYKPAVNLGQ 234
S+ RS++ + ++ L +T EKF LP+R SVW EYI LA +YKP +NLGQ
Sbjct: 10 SAAKRSLREQFQLQALRHQQTAIKMEKFDLPKRLQGSTPSVWNEYIALAMQYKP-LNLGQ 68
Query: 235 GFPDYHAPKHVTEALSQIATSENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEI 414
GFPD AP++VT +L+ IA +NPLLHQYTRG+G RLV LSK+YS L+G++++ ++I
Sbjct: 69 GFPDDAAPEYVTHSLADIAKEQNPLLHQYTRGYGHVRLVNALSKLYSGLVGKELNPLSDI 128
Query: 415 LVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGDDIS 594
L+TSGAYEALYSTI+GHVD GDEVIIIEP+FDCY+ MVK AGGVPRF+ LK + IS
Sbjct: 129 LITSGAYEALYSTIMGHVDVGDEVIIIEPFFDCYEPMVKMAGGVPRFVPLKLRKTEGPIS 188
Query: 595 SADWVLDEAELASLFNNRTKMIIVNTPHNPLG 690
SADWVLD+AE SLFN++TKMII+NTPHNP+G
Sbjct: 189 SADWVLDDAEFESLFNSKTKMIILNTPHNPIG 220
>AE014297-1392|AAF54707.2| 450|Drosophila melanogaster CG6950-PB,
isoform B protein.
Length = 450
Score = 264 bits (648), Expect = 6e-71
Identities = 128/212 (60%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Frame = +1
Query: 61 SSLSRSVKIEHFIRQLSVCRTMA--EKFRLPERYGAGEKSVWVEYIQLAAEYKPAVNLGQ 234
S+ RS++ + ++ L +T EKF LP+R SVW EYI LA +YKP +NLGQ
Sbjct: 10 SAAKRSLREQFQLQALRHQQTAIKMEKFDLPKRLQGSTPSVWNEYIALAMQYKP-LNLGQ 68
Query: 235 GFPDYHAPKHVTEALSQIATSENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEI 414
GFPD AP++VT +L+ IA +NPLLHQYTRG+G RLV LSK+YS L+G++++ ++I
Sbjct: 69 GFPDDAAPEYVTHSLADIAKEQNPLLHQYTRGYGHVRLVNALSKLYSGLVGKELNPLSDI 128
Query: 415 LVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGDDIS 594
L+TSGAYEALYSTI+GHVD GDEVIIIEP+FDCY+ MVK AGGVPRF+ LK + IS
Sbjct: 129 LITSGAYEALYSTIMGHVDVGDEVIIIEPFFDCYEPMVKMAGGVPRFVPLKLRKTEGPIS 188
Query: 595 SADWVLDEAELASLFNNRTKMIIVNTPHNPLG 690
SADWVLD+AE SLFN++TKMII+NTPHNP+G
Sbjct: 189 SADWVLDDAEFESLFNSKTKMIILNTPHNPIG 220
>AE014297-1391|AAF54709.2| 450|Drosophila melanogaster CG6950-PA,
isoform A protein.
Length = 450
Score = 264 bits (648), Expect = 6e-71
Identities = 128/212 (60%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Frame = +1
Query: 61 SSLSRSVKIEHFIRQLSVCRTMA--EKFRLPERYGAGEKSVWVEYIQLAAEYKPAVNLGQ 234
S+ RS++ + ++ L +T EKF LP+R SVW EYI LA +YKP +NLGQ
Sbjct: 10 SAAKRSLREQFQLQALRHQQTAIKMEKFDLPKRLQGSTPSVWNEYIALAMQYKP-LNLGQ 68
Query: 235 GFPDYHAPKHVTEALSQIATSENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEI 414
GFPD AP++VT +L+ IA +NPLLHQYTRG+G RLV LSK+YS L+G++++ ++I
Sbjct: 69 GFPDDAAPEYVTHSLADIAKEQNPLLHQYTRGYGHVRLVNALSKLYSGLVGKELNPLSDI 128
Query: 415 LVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGDDIS 594
L+TSGAYEALYSTI+GHVD GDEVIIIEP+FDCY+ MVK AGGVPRF+ LK + IS
Sbjct: 129 LITSGAYEALYSTIMGHVDVGDEVIIIEPFFDCYEPMVKMAGGVPRFVPLKLRKTEGPIS 188
Query: 595 SADWVLDEAELASLFNNRTKMIIVNTPHNPLG 690
SADWVLD+AE SLFN++TKMII+NTPHNP+G
Sbjct: 189 SADWVLDDAEFESLFNSKTKMIILNTPHNPIG 220
>AY069305-1|AAL39450.1| 501|Drosophila melanogaster HL07974p
protein.
Length = 501
Score = 47.2 bits (107), Expect = 2e-05
Identities = 32/100 (32%), Positives = 46/100 (46%)
Frame = +1
Query: 391 QIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKP 570
+IDA NE+++ SG AL IL D G V++ P F Y + + R+ L P
Sbjct: 172 EIDA-NEVVLCSGCSSALEYCILALADRGQNVLVPRPGFCLYYTLAQGLDIEVRYYDLLP 230
Query: 571 KPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNPLG 690
Q W D +L SL + T +++N P NP G
Sbjct: 231 DQQ--------WRADLVQLESLIDENTAALLINNPSNPCG 262
>AE014298-2024|AAF48363.1| 501|Drosophila melanogaster CG1461-PA
protein.
Length = 501
Score = 47.2 bits (107), Expect = 2e-05
Identities = 32/100 (32%), Positives = 46/100 (46%)
Frame = +1
Query: 391 QIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKP 570
+IDA NE+++ SG AL IL D G V++ P F Y + + R+ L P
Sbjct: 172 EIDA-NEVVLCSGCSSALEYCILALADRGQNVLVPRPGFCLYYTLAQGLDIEVRYYDLLP 230
Query: 571 KPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNPLG 690
Q W D +L SL + T +++N P NP G
Sbjct: 231 DQQ--------WRADLVQLESLIDENTAALLINNPSNPCG 262
>M80537-1|AAA28530.1| 5147|Drosophila melanogaster fat protein
protein.
Length = 5147
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 268 LHVSVRDSQESPDQGSRQAYTLQLIVCTQPIRFSHQLHNVPAIETFLP 125
L++S RD P G Q L V P F H +NV ET LP
Sbjct: 238 LNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALP 285
>BT001671-1|AAN71426.1| 242|Drosophila melanogaster RE50216p
protein.
Length = 242
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1
Query: 655 MIIVNTPHNPLG 690
MII+NTPHNP+G
Sbjct: 1 MIILNTPHNPIG 12
>AE014134-710|AAF51036.1| 5147|Drosophila melanogaster CG3352-PA
protein.
Length = 5147
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 268 LHVSVRDSQESPDQGSRQAYTLQLIVCTQPIRFSHQLHNVPAIETFLP 125
L++S RD P G Q L V P F H +NV ET LP
Sbjct: 238 LNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALP 285
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,366,504
Number of Sequences: 53049
Number of extensions: 675110
Number of successful extensions: 1717
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -