Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5p17
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical ... 176 1e-44
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 171 3e-43
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 171 4e-43
Z81081-1|CAB03090.1| 464|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U41510-2|ABP49526.1| 189|Caenorhabditis elegans Hypothetical pr... 30 1.8
U64600-1|AAK39203.1| 500|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical ... 28 5.5
AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical ... 28 5.5
AC006772-1|AAF60610.3| 326|Caenorhabditis elegans Hypothetical ... 28 5.5
Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 27 9.6
U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical p... 27 9.6
L16621-7|ABA00181.1| 300|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF016684-15|AAB66214.1| 543|Caenorhabditis elegans Hypothetical... 27 9.6
>AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical
protein F28H6.3 protein.
Length = 437
Score = 176 bits (428), Expect = 1e-44
Identities = 94/182 (51%), Positives = 119/182 (65%), Gaps = 1/182 (0%)
Frame = +1
Query: 148 ERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQIATSENPL-LHQYT 324
E G ++S+WVE+ +LA E K AV+LGQGFPD APK VTE L IA+ + HQYT
Sbjct: 11 ENVGEHQESIWVEFGKLAIENK-AVSLGQGFPDSPAPKFVTEILKDIASHPEKIESHQYT 69
Query: 325 RGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPY 504
R FG P LV LSK+YS G ++A ++IL+T GAY ALY + LG + GDEVIIIEP
Sbjct: 70 RAFGHPDLVGILSKIYSYFYGVNVNATDDILITVGAYNALYYSFLGWISKGDEVIIIEPA 129
Query: 505 FDCYDFMVKCAGGVPRFIALKPKPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNP 684
FDCY VK AGG P + +K K +G S++ + +D EL N RTKMI++N PHNP
Sbjct: 130 FDCYFPQVKFAGGTPISVVMKLK-EGSK-SASQFTIDFEELEKKINKRTKMIVINNPHNP 187
Query: 685 LG 690
G
Sbjct: 188 TG 189
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 171 bits (417), Expect = 3e-43
Identities = 94/196 (47%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Frame = +1
Query: 109 SVCRTMAEKFRLP-ERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQ 285
S CR + P ER S+WVE+ LAAE K AVNLGQGFPD APK VT+ L
Sbjct: 14 SRCRMSSSFAPKPAERTAQHSASIWVEFTTLAAETK-AVNLGQGFPDSPAPKFVTDLLEN 72
Query: 286 IATS-ENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILG 462
++ E HQYTRG+G P LV+ L+K+YS Q+D NE+LVT GAY +LY LG
Sbjct: 73 LSKHPELTAAHQYTRGYGHPMLVDILAKMYSHFYNVQVDPMNEVLVTVGAYLSLYYAFLG 132
Query: 463 HVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGDDISSADWVLDEAELASLFN 642
V+ GDEV+IIEP +DCY VK AGGVP + + +G S++ + +D A++ S N
Sbjct: 133 WVNKGDEVLIIEPAYDCYYPQVKFAGGVPVPVVMN-LAEG-ATSASQFTIDFADMESKIN 190
Query: 643 NRTKMIIVNTPHNPLG 690
+TKM+++N PHNP G
Sbjct: 191 EKTKMLVINNPHNPTG 206
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 171 bits (416), Expect = 4e-43
Identities = 90/182 (49%), Positives = 118/182 (64%), Gaps = 1/182 (0%)
Frame = +1
Query: 148 ERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQIATS-ENPLLHQYT 324
ER S+WVE+ LAAE K AVNLGQGFPD APK VT+ L ++ E HQYT
Sbjct: 11 ERTAQHSASIWVEFTTLAAETK-AVNLGQGFPDSPAPKFVTDLLENLSKHPELTAAHQYT 69
Query: 325 RGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPY 504
RG+G P LV+ L+K+YS Q+D NE+LVT GAY +LY LG V+ GDEV+IIEP
Sbjct: 70 RGYGHPMLVDILAKMYSHFYNVQVDPMNEVLVTVGAYLSLYYAFLGWVNKGDEVLIIEPA 129
Query: 505 FDCYDFMVKCAGGVPRFIALKPKPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNP 684
+DCY VK AGGVP + + +G S++ + +D A++ S N +TKM+++N PHNP
Sbjct: 130 YDCYYPQVKFAGGVPVPVVMN-LAEG-ATSASQFTIDFADMESKINEKTKMLVINNPHNP 187
Query: 685 LG 690
G
Sbjct: 188 TG 189
>Z81081-1|CAB03090.1| 464|Caenorhabditis elegans Hypothetical
protein F42D1.2 protein.
Length = 464
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/95 (28%), Positives = 48/95 (50%)
Frame = +1
Query: 406 NEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGD 585
+++++ SG AL I + G+ +++ P F Y + + P I KP
Sbjct: 139 DDVVLASGCSHALQMAIEAVANAGENILVPHPGFPLYSTLCR-----PHNIV--DKPYKI 191
Query: 586 DISSADWVLDEAELASLFNNRTKMIIVNTPHNPLG 690
D++ D +D + +A++ ++ TK IIVN P NP G
Sbjct: 192 DMTGEDVRIDLSYMATIIDDNTKAIIVNNPGNPTG 226
>U41510-2|ABP49526.1| 189|Caenorhabditis elegans Hypothetical
protein ZC449.7 protein.
Length = 189
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 511 CYDFMVKCAGGVPRF--IALKPKPQGDDISSADWVLDEAEL-ASLFNNRTKMIIVNT 672
C DF +CA G P+ +A++ K DDI A EL S F N +++ NT
Sbjct: 121 CNDFYYQCAYGEPKTDRMAIRHKLDNDDIEPAAKRHCAGELDYSRFGNERSVVVQNT 177
>U64600-1|AAK39203.1| 500|Caenorhabditis elegans Hypothetical
protein C33D12.2 protein.
Length = 500
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = +1
Query: 307 LLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEV 486
L + TR +LVE L +IG Q D F +L GA E LY + H T E
Sbjct: 287 LKEELTRSLERNKLVEMLKLSEKSIIGGQSDEFKMVL---GALE-LYDKTVAHAMTRYED 342
Query: 487 IIIEPY 504
I + P+
Sbjct: 343 IFMLPH 348
>AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical
protein C32F10.8b protein.
Length = 350
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Frame = +1
Query: 595 SADWVLDEAELASLFNNRTK-----MIIVNTPHNPLG 690
S++W +DEAEL FN+ K ++ + P NP G
Sbjct: 220 SSNWSMDEAELERSFNDHCKEYDIRVLCIINPGNPTG 256
>AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical
protein C32F10.8a protein.
Length = 504
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Frame = +1
Query: 595 SADWVLDEAELASLFNNRTK-----MIIVNTPHNPLG 690
S++W +DEAEL FN+ K ++ + P NP G
Sbjct: 220 SSNWSMDEAELERSFNDHCKEYDIRVLCIINPGNPTG 256
>AC006772-1|AAF60610.3| 326|Caenorhabditis elegans Hypothetical
protein Y46D2A.2 protein.
Length = 326
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 541 GVPRFIALKPKPQGDDISSADWVLDEAELASLFNNRTKMIIVNT 672
G+ F+ L K Q DD + + +V+ +A+ S + ++I+NT
Sbjct: 100 GLTGFLYLTTKKQADDPAFSVYVIKQAQTVSTTQPNSTVVILNT 143
>Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical
protein F22B8.6 protein.
Length = 392
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 538 GGVPRFIA-LKPKPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNPL 687
GG R+I + K G ++ S D + D L TKM+ +P NPL
Sbjct: 104 GGTIRYIRQIAVKKYGMEVDSVD-LTDVQNLEKAIKPNTKMVWFESPSNPL 153
>Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical
protein W09D6.1b protein.
Length = 714
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 91 HF-IRQLSVCRTMAEKFRLPERYGAGEKSVWVEYIQL 198
HF I ++ CR+ K R+ YG E S W Y ++
Sbjct: 242 HFPISSINSCRSPENKTRVFNVYGVTEVSCWASYFEV 278
>Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical
protein W09D6.1a protein.
Length = 707
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 91 HF-IRQLSVCRTMAEKFRLPERYGAGEKSVWVEYIQL 198
HF I ++ CR+ K R+ YG E S W Y ++
Sbjct: 242 HFPISSINSCRSPENKTRVFNVYGVTEVSCWASYFEV 278
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 286 IATSENPLLHQYTRGFGLPRLV 351
+ ++EN + +YTR FG P+LV
Sbjct: 1387 VVSTENAMRMRYTRSFGKPKLV 1408
>U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical
protein ZK1127.10 protein.
Length = 392
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 538 GGVPRFIALKPKPQ-GDDISSADWVLDEAELASLFNNRTKMIIVNTPHNPL 687
GG R+I P G ++ S D + D L TKM+ +P NPL
Sbjct: 104 GGTQRYIRRVAVPNHGLEVDSVD-LTDVQNLEKAIKPNTKMVWFESPSNPL 153
>L16621-7|ABA00181.1| 300|Caenorhabditis elegans Hypothetical
protein ZK688.10 protein.
Length = 300
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 331 FGLPRLVENLSKVYSPL-IGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPYF 507
FGL +V + K++ P + I I++ S + + + G D GD V I+P
Sbjct: 137 FGLLAVVSEIEKIFVPYTVILIIIKVTNIIILSQTIVVIGANLFGVHDFGDSVFGIDPVV 196
Query: 508 DC 513
C
Sbjct: 197 MC 198
>AF016684-15|AAB66214.1| 543|Caenorhabditis elegans Hypothetical
protein F45C12.15 protein.
Length = 543
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 568 PKPQGDDIS--SADWVLDEAELASLFNNRTKMIIVNTPHN 681
PKP+ + + SA L + ++ FN R +++ PHN
Sbjct: 106 PKPESESLQKISAQLGLTQQQVTGWFNRRNGTYLISGPHN 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,981,060
Number of Sequences: 27780
Number of extensions: 343336
Number of successful extensions: 721
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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