Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5p13
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical pr... 81 1e-15
AF026214-2|AAB71314.2| 446|Caenorhabditis elegans Hypothetical ... 52 4e-07
AF040644-4|AAB94968.2| 324|Caenorhabditis elegans Serpentine re... 31 0.58
Z81030-2|CAB02704.2| 343|Caenorhabditis elegans Hypothetical pr... 31 1.0
U51998-4|AAL00858.1| 492|Caenorhabditis elegans Glutamate trans... 28 5.4
U51998-3|AAL00857.1| 503|Caenorhabditis elegans Glutamate trans... 28 5.4
U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein. 28 5.4
U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein. 28 5.4
D86741-1|BAA21840.1| 503|Caenorhabditis elegans glutamate trans... 28 5.4
D86740-1|BAA13164.1| 503|Caenorhabditis elegans glutamate trans... 28 5.4
Z82052-6|CAB04829.4| 327|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF039053-1|AAC25883.1| 341|Caenorhabditis elegans Seven tm rece... 28 7.2
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 28 7.2
Z99277-1|CAB16485.1| 491|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z82055-4|CAB04846.1| 330|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81541-6|CAB04413.2| 326|Caenorhabditis elegans Hypothetical pr... 27 9.5
U80024-2|AAK18892.1| 327|Caenorhabditis elegans Serpentine rece... 27 9.5
>Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical
protein ZK822.5a protein.
Length = 577
Score = 80.6 bits (190), Expect = 1e-15
Identities = 42/145 (28%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Frame = +1
Query: 208 FLFGGKNMSVISVTLALIASHITSITLLGVPVEIYLRGTQYWASALSLIIVTFLTAVIYL 387
+L GG+ + + V L+L+ + ++ I +LGVP E++ RG Q W + + + + +T ++L
Sbjct: 48 YLMGGRQLPPLPVALSLLTTFLSGILMLGVPAEMFQRGAQIWLNFVIGVASSIVTCFVFL 107
Query: 388 PVFHKLQLSSSFEYLEIRF-STHTRTIAAVMFIISKLMLLPIVPYVPLTAFRLVTDQLAE 564
PVFHK++ + EY R+ S R + +++F++ ++ + +V Y P A V
Sbjct: 108 PVFHKMKSTCLHEYFIHRYNSILIRRLFSLLFLLFTIVYMSVVLYAPSVALSPVLQ--IN 165
Query: 565 RITAVVCVSCATLI--AVGGLQAIV 633
+ V+ C T + +GGL+A+V
Sbjct: 166 KWYLVLIFGCTTTLYTCLGGLKAVV 190
>AF026214-2|AAB71314.2| 446|Caenorhabditis elegans Hypothetical
protein F52H2.4 protein.
Length = 446
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Frame = +1
Query: 349 LIIVTF-LTAVIYLPVFHKLQLSSSFEYLEIRFSTHTRTIAAVMFIISKLMLLPIVPYVP 525
+ +++F + A ++LPV ++L+L++ +EY E RF R + +F + ++ + Y P
Sbjct: 8 MYVISFPIVAFVFLPVLYRLKLTTIYEYFERRFDYKCRFVTTSLFCVQMILYNSVALYAP 67
Query: 526 LTAFRLVTDQLAERITAVVCVSCATLIAVGGLQAIV---TLGMVTVFLAI 666
A +T+ + V A I+VGG++A + + M+ +FL +
Sbjct: 68 SLAIASITNIPITVSILITAVLSAFYISVGGVKAGIHTSAIQMLLIFLTM 117
>AF040644-4|AAB94968.2| 324|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 69 protein.
Length = 324
Score = 31.5 bits (68), Expect = 0.58
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +1
Query: 367 LTAVIYLPVFHKLQLSSSFEYLEIRFSTHTRTIAAVMF--IISKL---MLLPIVPYVPLT 531
L A Y P+ + L+ S++T + VMF +I L +LLP++ Y+P T
Sbjct: 195 LVATFYYPIVGSYWKHQAMTMLKTHLSSNTSKVTRVMFQTLIKGLNFQILLPMISYIPTT 254
Query: 532 AFRLVTDQLAER 567
+ L E+
Sbjct: 255 SIYLFNKVTGEQ 266
>Z81030-2|CAB02704.2| 343|Caenorhabditis elegans Hypothetical
protein C01G10.2 protein.
Length = 343
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +1
Query: 199 VAGFLFGGKNMSVISVTLALIAS---HITSITLLGVPVEIYLRGTQYWASALSLIIVTFL 369
+ F+ K +V ++ A AS ++ + +LGV V L G +++ A+ I+VTF
Sbjct: 41 IQNFVTCKKERTVFNMICAFRASNNVYVLLVVMLGVYVPESLIGYSFYSPAVESILVTFG 100
Query: 370 TAVIYLPVFHKLQLS 414
T ++ F + LS
Sbjct: 101 TNMLVFNEFQSVYLS 115
>U51998-4|AAL00858.1| 492|Caenorhabditis elegans Glutamate
transporter family protein1, isoform b protein.
Length = 492
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 577 VVCVSCATLIAVGGLQAIVTLGMVTVFLAIAGTGLP 684
VV VS +A G ++ + G+VT+ L + GLP
Sbjct: 377 VVTVSLTATLASIGAASVPSAGLVTMLLVLTAVGLP 412
>U51998-3|AAL00857.1| 503|Caenorhabditis elegans Glutamate
transporter family protein1, isoform a protein.
Length = 503
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 577 VVCVSCATLIAVGGLQAIVTLGMVTVFLAIAGTGLP 684
VV VS +A G ++ + G+VT+ L + GLP
Sbjct: 388 VVTVSLTATLASIGAASVPSAGLVTMLLVLTAVGLP 423
>U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein.
Length = 492
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 577 VVCVSCATLIAVGGLQAIVTLGMVTVFLAIAGTGLP 684
VV VS +A G ++ + G+VT+ L + GLP
Sbjct: 377 VVTVSLTATLASIGAASVPSAGLVTMLLVLTAVGLP 412
>U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein.
Length = 503
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 577 VVCVSCATLIAVGGLQAIVTLGMVTVFLAIAGTGLP 684
VV VS +A G ++ + G+VT+ L + GLP
Sbjct: 388 VVTVSLTATLASIGAASVPSAGLVTMLLVLTAVGLP 423
>D86741-1|BAA21840.1| 503|Caenorhabditis elegans glutamate
transporter protein.
Length = 503
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 577 VVCVSCATLIAVGGLQAIVTLGMVTVFLAIAGTGLP 684
VV VS +A G ++ + G+VT+ L + GLP
Sbjct: 388 VVTVSLTATLASIGAASVPSAGLVTMLLVLTAVGLP 423
>D86740-1|BAA13164.1| 503|Caenorhabditis elegans glutamate
transporter protein.
Length = 503
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 577 VVCVSCATLIAVGGLQAIVTLGMVTVFLAIAGTGLP 684
VV VS +A G ++ + G+VT+ L + GLP
Sbjct: 388 VVTVSLTATLASIGAASVPSAGLVTMLLVLTAVGLP 423
>Z82052-6|CAB04829.4| 327|Caenorhabditis elegans Hypothetical
protein T25E12.11 protein.
Length = 327
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/96 (21%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +1
Query: 226 NMSVISVTLALIASH-ITSITLLGVP-VEIYLRGTQYWASALSLIIVTFLTAVIYLPVFH 399
N+ IS+ A H + LL V+I++ + L+ ++++FLT IY+P+
Sbjct: 154 NVFFISLDAAAFMLHFLRQYCLLSTEKVQIFIACNEVLYMFLN-VVISFLTPFIYIPIMI 212
Query: 400 KLQLSSSFEYLEIRFSTHTRTIAAVMFIISKLMLLP 507
++ + + F + + + ++ KL++LP
Sbjct: 213 DIRKNRHLHSPQHMFLHNYIFFQSFLVVLFKLIILP 248
>Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical
protein R04D3.6 protein.
Length = 322
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 331 WASALSLIIVTFLTAVIYLPVFH--KLQLSSSFEYLEIRFSTHTRTIAAVMFIISKLMLL 504
W + L+LII +F V+ + FH K L + +E + + + + ++ +L
Sbjct: 189 WPNTLNLIITSFCIFVVPVLSFHWRKRTLRQIYHQMENMSAPRQQLYKSFVMGLTIQCVL 248
Query: 505 PIVPYVPL 528
P V Y+P+
Sbjct: 249 PYVFYIPI 256
>AF039053-1|AAC25883.1| 341|Caenorhabditis elegans Seven tm
receptor protein 52 protein.
Length = 341
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 214 FGGKNMSVISVTLALIASHITSITLLGVPVEIYLR 318
F KNMS++ LALIA H +I GV + +++
Sbjct: 190 FRWKNMSLLLHGLALIAVHYLAIVYFGVQMSRHMK 224
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 683 GKPVPAIARNTVTMPSVTIACSPPTAIKVAQDTHTTAV 570
GKP P A +T+++P C P T+ + HTT +
Sbjct: 603 GKPPPPAAASTISLP-----CQPSTSKEPDSSAHTTPI 635
>Z99277-1|CAB16485.1| 491|Caenorhabditis elegans Hypothetical
protein Y53C12A.2 protein.
Length = 491
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 568 ITAVVCVSCATLIAVGGLQAIVTLGMVTVFLAIAGTGLP 684
I +V VS +A G +I + G+VT+ + + GLP
Sbjct: 371 IGQIVTVSITATLASIGAASIPSAGLVTMLIVLTALGLP 409
>Z82055-4|CAB04846.1| 330|Caenorhabditis elegans Hypothetical
protein T26H2.4 protein.
Length = 330
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 200 LLDSYLEGKICPLFL*HWLLLQVT*PASLCSVC 298
+ DS L K C LFL HWLL + L +VC
Sbjct: 233 ITDSRLTEKDCNLFLKHWLLGISSQNLKLLTVC 265
>Z81541-6|CAB04413.2| 326|Caenorhabditis elegans Hypothetical
protein F48F5.4 protein.
Length = 326
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +1
Query: 367 LTAVIYLPVFHKLQLSSSFEYLEIRFSTHTR--TIAAVMFIISKL---MLLPIVPYVPLT 531
+ A Y P+ + + L+ S++T T+ + F+I L +LLP++ Y+P T
Sbjct: 195 IAATFYYPIVGSYWRYQAMKILKTHSSSNTSKGTLVLLRFLIKGLNFQILLPMISYIPTT 254
Query: 532 A 534
+
Sbjct: 255 S 255
>U80024-2|AAK18892.1| 327|Caenorhabditis elegans Serpentine
receptor, class h protein125 protein.
Length = 327
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 442 FSTHTRTIAAVMFIISKLMLLPIVPYVPLTAFRLVTDQLAERITAVVCVSCATLIAV 612
FST +++ +FII M+LP + VPL F ++ + +I VV T I +
Sbjct: 61 FSTIFMSLSMSLFIIP-FMMLPALAGVPLGVFSIIGISIPVQIYLVVTGPAVTGITI 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,968,992
Number of Sequences: 27780
Number of extensions: 307578
Number of successful extensions: 934
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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