Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5p08
(505 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003130-8|AAB54130.2| 611|Caenorhabditis elegans Pip kinase pr... 46 1e-05
U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine rece... 33 0.12
AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical ... 31 0.63
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 30 1.1
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 30 1.1
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.5
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 29 2.5
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 29 2.5
AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone deace... 29 2.5
AF016442-3|AAB65917.2| 597|Caenorhabditis elegans Hypothetical ... 29 2.5
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 28 3.3
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 28 3.3
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 28 3.3
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 28 3.3
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 28 3.3
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 28 3.3
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 28 4.4
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 28 4.4
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 28 4.4
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 4.4
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 28 4.4
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 27 5.8
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr... 27 5.8
AC006696-10|AAF39990.1| 228|Caenorhabditis elegans Hypothetical... 27 5.8
Z95559-14|CAJ76976.1| 338|Caenorhabditis elegans Hypothetical p... 27 7.7
Z95559-12|CAJ43917.1| 396|Caenorhabditis elegans Hypothetical p... 27 7.7
Z95559-11|CAB09005.2| 435|Caenorhabditis elegans Hypothetical p... 27 7.7
>AF003130-8|AAB54130.2| 611|Caenorhabditis elegans Pip kinase
protein 1 protein.
Length = 611
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/36 (50%), Positives = 29/36 (80%)
Frame = +3
Query: 396 KIGHRRVGEGGEITYKKIQSSQIMGSIQLGIQHAIG 503
K+GHRR+ E G ++YKK+ ++ +M +IQLGI ++IG
Sbjct: 66 KLGHRRIDEQGGVSYKKVPTNALMQAIQLGISNSIG 101
>U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein212 protein.
Length = 330
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -3
Query: 266 LRLFQNRTFHHFYVI*IARSHFCFTFTSLCIQVLFNSFMCTVTILMAHFALRGITTIQYS 87
L F N+ ++F VI ++ F T +CI V + F ++AH + +++++ S
Sbjct: 267 LLYFHNQAINNFIVIIVSSHGFFSTIVMICIHVPYREFTLRWLTVLAHVRMENLSSVRPS 326
>AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical
protein M116.5 protein.
Length = 1064
Score = 30.7 bits (66), Expect = 0.63
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 234 VMESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGPMGAISK 377
++E S +SE+ VA+ R S+ EK Y P VGP + K
Sbjct: 1017 IVEPSSPSQSESRASPEVADRQKRISLSLKEKGKRYSPQVGPSSSTPK 1064
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 33 YTTDSFRKVIDFFL-IKLERILNSGDTAKCEVSHENRYCAHKRIE*YLNTK*CKSETKMA 209
Y+ +F V F L I L + N D K +++HE ++C H + + +S K A
Sbjct: 15 YSAVTFSVVAVFSLCITLPLVYNYVDGIKTQINHEIKFCKHSARDIFAEVNHIRSSPKNA 74
Query: 210 S 212
S
Sbjct: 75 S 75
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 KSLRTLRSSQSPRTMIATGVRSPKKMYLTTQPSAQWARSAKFTSRTGRSDTGAS-ARAER 432
+SL + + R + +G R+P + + S RS + + RS R R
Sbjct: 305 RSLSKSPARRRSRHLSRSGSRTPAQRHSRRSESTSRRRSGRHSRSRSRSPPRKRPVRRSR 364
Query: 433 SHTRRYSPRRSWDR 474
S +R +P R+W R
Sbjct: 365 SRSRSRTPNRNWTR 378
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 237 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 359
++ S + S TE + EDDD + S NVP VGP
Sbjct: 620 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 660
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 237 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 359
++ S + S TE + EDDD + S NVP VGP
Sbjct: 654 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 694
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 237 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 359
++ S + S TE + EDDD + S NVP VGP
Sbjct: 750 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 790
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 33 YTTDSFRKVIDFFL-IKLERILNSGDTAKCEVSHENRYCAHKRIE*YLNTK*CKSETKMA 209
Y+ +F V F L I L + N D K +++HE ++C H + + + K A
Sbjct: 15 YSAVTFSTVAVFSLCITLPLVYNYVDGIKTQINHEIKFCKHSARDIFAEVNHIRGSPKNA 74
Query: 210 S 212
S
Sbjct: 75 S 75
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 237 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 359
++ S + S TE + EDDD + S NVP VGP
Sbjct: 620 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 660
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 237 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 359
++ S + S TE + EDDD + S NVP VGP
Sbjct: 654 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 694
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 237 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 359
++ S + S TE + EDDD + S NVP VGP
Sbjct: 750 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 790
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 28.7 bits (61), Expect = 2.5
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = +3
Query: 153 KRIE*YLNTK*CKSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDRD---RSSIA 323
K+I LN K K E K S + + E LKK + + V EDDD D
Sbjct: 162 KKITDRLNEKAVKEEPK--SKNDQILNPRELRKLKKQQKTAKVEVVEDDDDDDDEDDDDV 219
Query: 324 EKNVPYDPAVGPMGAISKVHKSDRKIGHRRVGE 422
E P +P+ + K D+ ++ V E
Sbjct: 220 EAPAPQEPSRKQKAHNQREEKKDKNKKYQPVKE 252
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 28.7 bits (61), Expect = 2.5
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = +3
Query: 153 KRIE*YLNTK*CKSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDRD---RSSIA 323
K+I LN K K E K S + + E LKK + + V EDDD D
Sbjct: 162 KKITDRLNEKAVKEEPK--SKNDQILNPRELRKLKKQQKTAKVEVVEDDDDDDDEDDDDV 219
Query: 324 EKNVPYDPAVGPMGAISKVHKSDRKIGHRRVGE 422
E P +P+ + K D+ ++ V E
Sbjct: 220 EAPAPQEPSRKQKAHNQREEKKDKNKKYQPVKE 252
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 237 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 359
++ S + S TE + EDDD + S NVP VGP
Sbjct: 654 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 694
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 237 MESSVLKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGP 359
++ S + S TE + EDDD + S NVP VGP
Sbjct: 750 LQKSGSQISHAPTEPVIREDDDENNSENQNGNVPLIGGVGP 790
>AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone
deacetylase protein 4 protein.
Length = 755
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 246 SVLKKSENATEQSVAEDDDRDR-SSIAEKNVPYDPAVGPMGAISKVHKS 389
S+ + ++ + + E DD R SS+A +++P AV + + +HKS
Sbjct: 670 SISEAAQQCVQALIGESDDAGRLSSVALESLPNPSAVETLQKVIAIHKS 718
>AF016442-3|AAB65917.2| 597|Caenorhabditis elegans Hypothetical
protein K12B6.2 protein.
Length = 597
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 81 LERILNSGDTAKCEVSHENRYCAHKRIE*YLNTK*CKSETKMA--SGDSDHIEVMESSVL 254
+E+++ G A VS E R +E L T+ K + K+ G + IE + +L
Sbjct: 164 IEKLMAKGIRAMKAVSRETRALITPFME-LLKTEKTKIDKKIEIERGQLEDIEKRKQRIL 222
Query: 255 KKSENATEQSVAEDDDRDRS 314
K E + +S+ E+D R+
Sbjct: 223 KMWEKSMNRSLTEEDKMSRN 242
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 33 YTTDSFRKVIDFFL-IKLERILNSGDTAKCEVSHENRYCAHKRIE*YLNTK*CKSETKMA 209
Y+ +F V F L I L + N D K +++HE ++C H + + + K A
Sbjct: 15 YSAVTFSVVAVFSLCITLPLVYNYVDGIKTQINHEIKFCKHSARDIFAEVNHIRGSPKNA 74
Query: 210 S 212
S
Sbjct: 75 S 75
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 33 YTTDSFRKVIDFFL-IKLERILNSGDTAKCEVSHENRYCAHKRIE*YLNTK*CKSETKMA 209
Y+ +F V F L I L + N D K +++HE ++C H + + + K A
Sbjct: 15 YSAVTFSVVAVFSLCITLPLVYNYVDGIKTQINHEIKFCKHSARDIFAEVNHIRGSPKNA 74
Query: 210 S 212
S
Sbjct: 75 S 75
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +3
Query: 180 K*CKSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDRDRSSIAEKN 332
K KS+ +S + + EV E S KKS +T+++ ++DD+ + +K+
Sbjct: 191 KSAKSKDDDSSDEEEEEEVKEKSP-KKSSKSTKRAASDDDEEEEPVATKKS 240
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 370 SAKFTSRTGRSDTGASARAERSHTRRYSPRRS 465
S + TSR R D + R +RSH+R SP S
Sbjct: 51 SRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSS 82
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 370 SAKFTSRTGRSDTGASARAERSHTRRYSPRRS 465
S + TSR R D + R +RSH+R SP S
Sbjct: 79 SRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSS 110
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 370 SAKFTSRTGRSDTGASARAERSHTRRYSPRRS 465
S + TSR R D + R +RSH+R SP S
Sbjct: 137 SRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSS 168
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 370 SAKFTSRTGRSDTGASARAERSHTRRYSPRRS 465
S + TSR R D + R +RSH+R SP S
Sbjct: 138 SRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSS 169
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical protein
Y6B3B.1 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +2
Query: 341 RPSRRPNGRDQQSSQVGPEDRTPAXXXXXXDHIQEDTVLADHGIDTA 481
RPS RP R Q+ SQ E DH D + D IDT+
Sbjct: 1622 RPSFRPYRRPQERSQGSHEAAQACRRCSEADHHPSDDSIIDLMIDTS 1668
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical
protein E03G2.2 protein.
Length = 1503
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 252 LKKSENATEQSVAEDDDRDRSSIAEKNVPYDPAVGPMGAISKVHKSDRKI 401
LK++E A E+ V DD R+R+ + P GA++ + DR I
Sbjct: 247 LKQTEKAREKQVKLDDKRERARTGSEKAPLLGTFNNYGAVN-LDDKDRVI 295
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/109 (17%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +3
Query: 189 KSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDR-----DRSSIAEKNVPYDPAV 353
K T + + + +++ E ++ E AE ++ D+S + ++ +PA
Sbjct: 2342 KKTTVIETEQASEVKMREKGEERRKEEKRVSFAAEVQEKTMEAIDKSLGLDTSMEVEPAF 2401
Query: 354 GPMGAISKVHKSDRKIGHRRVGEGGEITYKKIQSSQIMGSIQLGIQHAI 500
I K K +R+ R + + +K ++ + ++ ++ +G H I
Sbjct: 2402 QKPSIIKKPMKKERERRSRDLRQNAAPAFKPVRRNSLLQALAIGSPHNI 2450
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform a protein.
Length = 1633
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/109 (17%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +3
Query: 189 KSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDR-----DRSSIAEKNVPYDPAV 353
K T + + + +++ E ++ E AE ++ D+S + ++ +PA
Sbjct: 1273 KKTTVIETEQASEVKMREKGEERRKEEKRVSFAAEVQEKTMEAIDKSLGLDTSMEVEPAF 1332
Query: 354 GPMGAISKVHKSDRKIGHRRVGEGGEITYKKIQSSQIMGSIQLGIQHAI 500
I K K +R+ R + + +K ++ + ++ ++ +G H I
Sbjct: 1333 QKPSIIKKPMKKERERRSRDLRQNAAPAFKPVRRNSLLQALAIGSPHNI 1381
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/109 (17%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +3
Query: 189 KSETKMASGDSDHIEVMESSVLKKSENATEQSVAEDDDR-----DRSSIAEKNVPYDPAV 353
K T + + + +++ E ++ E AE ++ D+S + ++ +PA
Sbjct: 7188 KKTTVIETEQASEVKMREKGEERRKEEKRVSFAAEVQEKTMEAIDKSLGLDTSMEVEPAF 7247
Query: 354 GPMGAISKVHKSDRKIGHRRVGEGGEITYKKIQSSQIMGSIQLGIQHAI 500
I K K +R+ R + + +K ++ + ++ ++ +G H I
Sbjct: 7248 QKPSIIKKPMKKERERRSRDLRQNAAPAFKPVRRNSLLQALAIGSPHNI 7296
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +2
Query: 341 RPSRRPNGRDQQSSQVGPEDRTPAXXXXXXDHIQEDTVLADHGIDTA 481
RPS RP R Q+ SQ E DH D + D IDT+
Sbjct: 1622 RPSFRPYRRPQERSQGSHEAAQACRRCSEADHHPSDDSIIDLMIDTS 1668
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 249 VLKKSENA--TEQSVAEDDDRDRSSIAEKNVP 338
+L++S N T+++ DDD DRS E+ VP
Sbjct: 422 LLRQSSNTDGTDRATNNDDDSDRSESPEERVP 453
>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical
protein F21H12.6 protein.
Length = 1374
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 118 HFAVSPLFSILSNLIKKKSITLRKESVV*SNPSDTISHS 2
H + P+F + + +K + I+ RKE VV PS I+ S
Sbjct: 160 HVGLKPIFELYTKGVKSRVISERKEDVV--GPSHNIAAS 196
>AC006696-10|AAF39990.1| 228|Caenorhabditis elegans Hypothetical
protein W08E12.1 protein.
Length = 228
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 54 KVIDFFLIKLERILNS-GDTAKCEVSHEN 137
K+ + + + I+NS GD KC+V HEN
Sbjct: 101 KIFEEISKECDHIMNSAGDCEKCQVEHEN 129
>Z95559-14|CAJ76976.1| 338|Caenorhabditis elegans Hypothetical
protein Y41E3.7c protein.
Length = 338
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +3
Query: 264 ENATEQSVAEDDDRDRSSI-AEKNVPYDPAVGPMGA-----ISKVHKSDRKIGHR---RV 416
E + + + DDD D S A +++P +PA+ P I++ + +K GH +V
Sbjct: 124 EESHQHQIRRDDDSDVSDDEAGEDLPSNPAISPASLWNRQDINEFKANIKKDGHEGIIKV 183
Query: 417 GEGGEITYK 443
G G +T +
Sbjct: 184 GHGETVTVR 192
>Z95559-12|CAJ43917.1| 396|Caenorhabditis elegans Hypothetical
protein Y41E3.7b protein.
Length = 396
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +3
Query: 264 ENATEQSVAEDDDRDRSSI-AEKNVPYDPAVGPMGA-----ISKVHKSDRKIGHR---RV 416
E + + + DDD D S A +++P +PA+ P I++ + +K GH +V
Sbjct: 182 EESHQHQIRRDDDSDVSDDEAGEDLPSNPAISPASLWNRQDINEFKANIKKDGHEGIIKV 241
Query: 417 GEGGEITYK 443
G G +T +
Sbjct: 242 GHGETVTVR 250
>Z95559-11|CAB09005.2| 435|Caenorhabditis elegans Hypothetical
protein Y41E3.7a protein.
Length = 435
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Frame = +3
Query: 264 ENATEQSVAEDDDRDRSSI-AEKNVPYDPAVGPMGA-----ISKVHKSDRKIGHR---RV 416
E + + + DDD D S A +++P +PA+ P I++ + +K GH +V
Sbjct: 221 EESHQHQIRRDDDSDVSDDEAGEDLPSNPAISPASLWNRQDINEFKANIKKDGHEGIIKV 280
Query: 417 GEGGEITYK 443
G G +T +
Sbjct: 281 GHGETVTVR 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,521,988
Number of Sequences: 27780
Number of extensions: 238348
Number of successful extensions: 860
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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