Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5p06
(577 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 167 4e-42
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 167 7e-42
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 161 3e-40
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 158 3e-39
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 50 2e-06
04_04_0401 - 24946801-24947562 44 1e-04
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 30 1.5
09_02_0251 - 6282420-6282526,6282642-6283104,6283223-6283289,628... 29 2.7
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 29 3.5
06_03_0049 + 15961706-15962017,15962952-15963851,15964769-159649... 28 4.6
06_03_0225 - 18413668-18413751,18414641-18415493,18417497-18417516 28 6.1
03_06_0434 + 33894664-33895173 27 8.1
02_04_0621 - 24502383-24502476,24502532-24504015,24504125-245041... 27 8.1
01_06_0529 - 30026101-30026277,30026363-30026438,30026509-300265... 27 8.1
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 167 bits (407), Expect = 4e-42
Identities = 80/164 (48%), Positives = 110/164 (67%)
Frame = +2
Query: 56 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXS 235
+L +IPRPKM+VC+LGD QH +EA+ + + M S
Sbjct: 53 KLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLAS 112
Query: 236 ESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVD 415
E++IKQIPRLLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG++
Sbjct: 113 EAIIKQIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLS 167
Query: 416 MTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 547
M ++ QN+ +S+NFLVSLLKK+WQNVR L++KSTMG P R++
Sbjct: 168 MEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPYRVF 211
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 167 bits (405), Expect = 7e-42
Identities = 80/164 (48%), Positives = 110/164 (67%)
Frame = +2
Query: 56 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXS 235
+L +IPRPKM+VC+LGD QH +EA+ + + M S
Sbjct: 71 KLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLAS 130
Query: 236 ESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVD 415
E++IKQIPRLLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG++
Sbjct: 131 EAIIKQIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLS 185
Query: 416 MTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 547
M ++ QN+ +S+NFLVSLLKK+WQNVR L++KSTMG P R++
Sbjct: 186 MEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 229
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 161 bits (392), Expect = 3e-40
Identities = 79/164 (48%), Positives = 108/164 (65%)
Frame = +2
Query: 56 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXS 235
+L +IPRPK++VC+LGD QH +EA+ + + M S
Sbjct: 53 KLPHIPRPKLKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLAS 112
Query: 236 ESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVD 415
E++IKQIPRLLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG+
Sbjct: 113 EAIIKQIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCA 167
Query: 416 MTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 547
M ++ QNV +S+NFLVSLLKK+WQNVR L++KSTMG R++
Sbjct: 168 MEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKVYRVF 211
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 158 bits (384), Expect = 3e-39
Identities = 85/186 (45%), Positives = 113/186 (60%), Gaps = 22/186 (11%)
Frame = +2
Query: 56 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXS 235
+L +IPRPKM+VC+LGD QH +EA+ + + M S
Sbjct: 53 KLPHIPRPKMKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLAS 112
Query: 236 ESLIKQIPRLLGPGLNKAGK----------------------FPGLLSHQESMTQKIDEV 349
E++IKQIPRLLGPGLNKAGK FP L++HQES+ K++E
Sbjct: 113 EAIIKQIPRLLGPGLNKAGKILLVYGRSILKSSYIIVSKRGKFPTLVTHQESLESKVNET 172
Query: 350 KGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMG 529
K T+KFQ+KKVLC+ VAVG+ M ++ QNV +S+NFLVSLLKK+WQNVR L++KSTMG
Sbjct: 173 KATVKFQLKKVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG 232
Query: 530 PPQRLY 547
R++
Sbjct: 233 KVIRVF 238
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +2
Query: 239 SLIKQIPRLLGPGLNKAGKFPGLLSHQES-MTQKIDEVKGTIKFQMKKVLCLSVAVGHVD 415
+++ +PR+LG K P + + +++ +V + ++ C + VG +D
Sbjct: 145 AVLPLLPRVLGKAFYSTKKAPVAVDFARTGWLEQVRKVMNSTFLYLRTGTCSGIKVGRLD 204
Query: 416 MTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 520
M ++ +NV ++ V + K W NVRSLH+K+
Sbjct: 205 MKEEDTVENVMAAVEAAVENVPKKWANVRSLHLKA 239
>04_04_0401 - 24946801-24947562
Length = 253
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/93 (23%), Positives = 44/93 (47%)
Frame = +2
Query: 269 GPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVH 448
G KA + + ++ + E ++ +++ C +V VGH M +E +NV
Sbjct: 113 GKAAAKAARVVPVDLADQAWAESAREAARRVELRVEGGTCRAVRVGHAAMAREEAVENVV 172
Query: 449 LSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 547
++ + + + W+NVR+LH+K+ LY
Sbjct: 173 AAVEAAAACVPRKWRNVRALHVKAPESVALPLY 205
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 431 LAQNVHLSINFLVSLLKKH 487
+ + VHLS+NF++ L+KKH
Sbjct: 302 IVEGVHLSLNFVMGLMKKH 320
>09_02_0251 -
6282420-6282526,6282642-6283104,6283223-6283289,
6283536-6283808,6284096-6284907,6285402-6285479,
6285586-6285636,6285737-6285817,6285903-6285982,
6288481-6288652
Length = 727
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 437 EQAHQESCPHGQLLQKDTA---PSSFGT*WFP*LHQSSASWTPGGREDQGIYQLCSNR 273
E+ + ++ + QL+ K A P F WFP +H ++ S R Q I+ +C N+
Sbjct: 471 EKYNLQNVKYLQLMFKARATYIPVYFKNDWFPFIHSTTLSEGTNARRRQDIFGVCCNK 528
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 413 DMTPDELAQNVHLSINFLVSLLKKH 487
D + + VHLS+NF++ L++KH
Sbjct: 262 DRKESVVVEGVHLSLNFVMGLMRKH 286
>06_03_0049 +
15961706-15962017,15962952-15963851,15964769-15964913,
15964969-15965705
Length = 697
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = -2
Query: 543 NLWGGPIVDFICNDRTFCQCFLSSDTRKLMERCTF*ASSSGVMSTWPTATERHSTFFIWN 364
++W P + +C+D +C + + K++ERC + G S + T + F W
Sbjct: 37 HIWDEPYLYRVCSDGLLRRCVPTEEGLKIIERCHA-SPYGGHYSAFRTQAKIWQCGFFWP 95
Query: 363 LM 358
M
Sbjct: 96 TM 97
>06_03_0225 - 18413668-18413751,18414641-18415493,18417497-18417516
Length = 318
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/70 (24%), Positives = 28/70 (40%)
Frame = -2
Query: 543 NLWGGPIVDFICNDRTFCQCFLSSDTRKLMERCTF*ASSSGVMSTWPTATERHSTFFIWN 364
+LW P + +C+D +C K++E+C A G + T + + F W
Sbjct: 125 HLWYAPYLYRVCSDGLLRRCVPVDKGMKIIEKCHA-APYGGHYGAFRTHAKIWQSGFFWP 183
Query: 363 LMVPLTSSIF 334
M T F
Sbjct: 184 TMYDDTKEFF 193
>03_06_0434 + 33894664-33895173
Length = 169
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -3
Query: 470 TQGS*WKDAHSEQAHQESCPHGQLLQKDTAP 378
T G W + H+ CPHG L AP
Sbjct: 110 TMGLRWPTPQRREQHKRLCPHGYRLPGPAAP 140
>02_04_0621 -
24502383-24502476,24502532-24504015,24504125-24504177,
24504871-24504984,24505068-24505202,24505960-24506055,
24506692-24506827
Length = 703
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 185 CSYSIFSKPQHPYMAHSRF*PRHNVAGLQER 93
C SIFS +HP+ S+ ++AGL+E+
Sbjct: 478 CLNSIFSTSEHPFQLGSKRLHETSLAGLEEK 508
>01_06_0529 -
30026101-30026277,30026363-30026438,30026509-30026570,
30026882-30027031,30027213-30027338,30028096-30028305,
30028870-30028938,30029024-30029080,30029131-30029277,
30029358-30029542,30029623-30029698,30029796-30029918,
30030395-30030410,30031743-30032745,30033521-30033789,
30034297-30034415
Length = 954
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +2
Query: 245 IKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIK 364
++ + +LG N K+ LL + + KIDE++ ++K
Sbjct: 289 VENLQHMLGCLKNHVEKYAALLDQHDDLHDKIDELEASLK 328
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,698,281
Number of Sequences: 37544
Number of extensions: 325482
Number of successful extensions: 849
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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