Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5p02
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    29   0.16 
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    24   4.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.0  
AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    23   6.0  
AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    23   7.9  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 28.7 bits (61), Expect = 0.16
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +2

Query: 284 IMMPGLIGWLLIYFGNNIPVLMIGRILGGMSAGGTVALGAIVIG 415
           + M  +  W+ +YF    P++  G +LG  +     A+ ++V G
Sbjct: 520 LSMQCVASWIFLYFACLSPIITFGGLLGTATGNNIAAMESLVSG 563


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 212 KCQPMTIAMKPYPNRLVWESQVLVELAGDSWYSSAVYP 99
           +C P   A+K +  R + E+  + +++  S YSS V P
Sbjct: 27  RCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLP 64


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -1

Query: 243 VEDMKKPG-IPEMPTDDDSHEAV 178
           +ED+   G IPE P DD++ E +
Sbjct: 681 IEDVSLDGMIPEGPKDDNTRETI 703


>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 434 YRGMYLNMKTASVCLGGM 487
           YRG+ + +K + +C GG+
Sbjct: 279 YRGINIALKASQMCAGGL 296


>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +3

Query: 486 CSSIS*DTFTIGGP-SLCKQRFHILFQWRSLARGPRALR 599
           C  +    F +G    L K+RF  L QWR L     A++
Sbjct: 183 CERVDLLKFALGDKYELDKERFGKLLQWRELMEKDDAVK 221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,004
Number of Sequences: 2352
Number of extensions: 18276
Number of successful extensions: 72
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)