BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5o15
(561 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0721 - 10677286-10678018,10679293-10679373,10682516-106826... 32 0.36
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 32 0.36
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 31 0.63
09_02_0234 - 6116931-6117052,6117549-6118369,6118573-6118601,611... 30 1.1
02_05_0548 + 29896648-29896701,29896818-29897021,29897451-298977... 30 1.1
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 30 1.5
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 29 1.9
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 29 1.9
07_03_1791 - 29552218-29552427,29552858-29553358,29560369-295604... 29 2.5
07_01_0987 + 8320205-8320472,8321549-8321690,8321773-8321893,832... 29 2.5
04_04_1396 + 33227126-33227846,33228530-33228637,33228825-33230029 29 2.5
04_01_0164 + 1858758-1858953,1859178-1859485 29 2.5
02_05_1335 - 35770403-35770543,35770630-35770755,35770859-357709... 29 2.5
04_04_1650 - 35051728-35051823,35052054-35052162,35052270-350524... 29 3.4
04_04_0904 + 29281572-29281753,29283702-29283786,29284190-292842... 29 3.4
02_01_0642 - 4803464-4805665,4806231-4806320 28 4.4
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 28 4.4
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13... 28 5.9
05_03_0013 + 7362056-7362471,7363235-7364081,7364272-7364758,736... 28 5.9
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 28 5.9
04_01_0290 + 3843610-3843712,3844088-3846003 28 5.9
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 28 5.9
09_04_0199 - 15533619-15534107,15534956-15535362,15535559-155358... 27 7.7
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291... 27 7.7
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 27 7.7
>03_02_0721 -
10677286-10678018,10679293-10679373,10682516-10682645,
10682969-10683101
Length = 358
Score = 31.9 bits (69), Expect = 0.36
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 300 LSRVPCCVRVGFSRVRPPVANLQFLAGTPARRCSPKDQENSTRSVPKN 157
+ R PCC +VG R R + LAG A K E S RS+PKN
Sbjct: 1 MGRAPCCEKVGLKRGRWTTEEDEKLAGYIA-----KHGEGSWRSLPKN 43
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 31.9 bits (69), Expect = 0.36
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Frame = +3
Query: 216 ECLQGTEDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALRE---V 386
+ +Q + L+ E + L ERN+EL LR + +ED L K+ L E V
Sbjct: 2139 QLMQKDDKLRKVDEKVQFLQERNQELCRVLRDLEVAVEDAEGVKVDLEKKITTLTERGAV 2198
Query: 387 NDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTV 557
D+ R+ L AN+ L V+ ++ +SL S +T+ + E+ ++ +
Sbjct: 2199 QDNETRL----------LREANNTLQVEVGIHEQKEESLMSTFETMRKEAEQHEREI 2245
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 31.1 bits (67), Expect = 0.63
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Frame = +3
Query: 207 VELECLQGTEDLQLAAELGKTL--LERNK-ELETALRQHQNVIEDQAQEIEYLTKQTVAL 377
VEL+ LQ E L L L +E K EL+ + + +++I + E+E + Q V L
Sbjct: 834 VELK-LQMDESRSLITNLKDELEQVEAQKVELKLQMDESRSLITNLKDELEQVEAQKVEL 892
Query: 378 REVNDSRLRIYEQLELSIQDLERANHRL--AVDHAADK-KHIKSLCSNI 515
+E R +++ + L R+N +L VDH ++ K +++L +++
Sbjct: 893 KENQLESHRRLSEVQEDSEALRRSNAKLQATVDHVVEECKSLQTLTADL 941
>09_02_0234 -
6116931-6117052,6117549-6118369,6118573-6118601,
6118711-6119020,6119469-6119476,6120104-6120232,
6120341-6120445
Length = 507
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 111 LDVKMSEEQEQCDSFNSWELNGLNSLD 191
+ VK S+++ +CD F SWE ++ +D
Sbjct: 444 IKVKCSQDKVKCDFFTSWERENIHGID 470
>02_05_0548 +
29896648-29896701,29896818-29897021,29897451-29897708,
29897821-29898036,29898130-29898285,29898396-29898707,
29898795-29898882,29899055-29899203,29899390-29899722
Length = 589
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 255 ELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYE--QLELS 428
+LGK ER KEL + + + + A +E Q VAL ++N+ L + + + +L
Sbjct: 107 QLGKKKKERIKELANIQSRIEQIRGEIAGTLEM--GQQVALPQINEDDLTVRKLREFQLQ 164
Query: 429 IQDLERANHR 458
+Q+LE+ R
Sbjct: 165 LQELEKEKSR 174
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 111 LDVKMSEEQEQCDSFNSWEL--NGLNSLDLWDYTVELECLQGTEDLQLAAELGKT 269
L+V S++Q N+ E+ NGL+ + D+ L+ + G D+QL + KT
Sbjct: 418 LEVSSSQQQHSLGHINTAEIDGNGLSHANPSDWNSSLDWIHGHADVQLESMRSKT 472
>08_02_1453 -
27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 270 LLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERA 449
L E+ KEL T R+ N ++AQ ++ + LRE L + EQ + ++
Sbjct: 157 LREQTKELATFRRERDNSEAERAQHLKQIHDLQEHLREKESQMLALEEQHRAAQDNIIYK 216
Query: 450 NHRLAVDHA 476
+ +L HA
Sbjct: 217 DEQLREAHA 225
>02_05_0484 - 29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 29.5 bits (63), Expect = 1.9
Identities = 36/167 (21%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Frame = +3
Query: 27 SRRRDHQNFNNEIWLQLN*KRRTRRQ*TLDVKMSEEQEQCDSFNSWELNGLNSLDLWDYT 206
+++ +++ N E W KR R+ LD+K +EQ ++ E + ++++D
Sbjct: 526 AKKLNNEKKNLERWHDNEEKRLKDREDELDIKY---KEQGENLALKEKSLIDNIDHQRLE 582
Query: 207 VELECLQGTEDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEI----EYLTKQTVA 374
E + DLQ +L + LE E + A ++ + +E++ E+ +++ +
Sbjct: 583 NEELLKRERADLQRNLQLHRHELEMEMEKKQASKERE--LEEKENELNRKMDFVENELKR 640
Query: 375 LREVNDSRLRIY----EQLELSIQDLERANHRLAVDHAADKKHIKSL 503
E+N+S+++ +QL+ + L +L D A ++ I SL
Sbjct: 641 AAELNESKIQKILLEKKQLQKEKEVLVEDRQKLETDKADIRRDIDSL 687
>07_03_1791 -
29552218-29552427,29552858-29553358,29560369-29560449,
29563783-29564015,29564976-29565042
Length = 363
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +3
Query: 222 LQGTEDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRL 401
+ GT ++ L K +KEL + R+ ++QAQ + L ++ AL E R
Sbjct: 102 ISGTLGALVSIPLLKVETHGSKELHLSQREQDARSQEQAQRAQELERRAKALEE----RA 157
Query: 402 RIYEQLELSIQDLER 446
R+ +Q E ++ ER
Sbjct: 158 RLLDQRESTLASHER 172
>07_01_0987 +
8320205-8320472,8321549-8321690,8321773-8321893,
8322190-8322264,8322784-8322846,8322934-8323086
Length = 273
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 282 NKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL 419
NKE ++QH + D ++EIE K + EV + L E++
Sbjct: 133 NKEYGPVIKQHMQYVLDHSEEIEKTLKVQAQVSEVKNIMLENIEKV 178
>04_04_1396 + 33227126-33227846,33228530-33228637,33228825-33230029
Length = 677
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 228 GTEDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRI 407
G ED ++ A+L + L E +RQ + +ED + L Q + N + +
Sbjct: 591 GAEDAKVVAKLAEACLRLKGEERPTMRQVETTLEDVQRSKVQLNHQIARVSNSNTLKNQT 650
Query: 408 YE 413
YE
Sbjct: 651 YE 652
>04_01_0164 + 1858758-1858953,1859178-1859485
Length = 167
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 229 ELKICNWRPNSGKPYSNATRNSRQP 303
E+K+C WRP G + R RQP
Sbjct: 143 EVKLCPWRPRQGGCSTGQCRGRRQP 167
>02_05_1335 -
35770403-35770543,35770630-35770755,35770859-35770942,
35771444-35771656,35771759-35771977
Length = 260
Score = 29.1 bits (62), Expect = 2.5
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 9/120 (7%)
Frame = +3
Query: 168 LNGLNSLDLWDYTVELECLQGTEDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEI 347
++ N L +E EC DL+ A E L + N E+ L H + ++
Sbjct: 94 VSAYNDLSSHSTKLERECTLYERDLERAMESCDDLAKENDEMRARLNDH-TTLSALTTQV 152
Query: 348 EYLTKQTVALREVNDSRLRIYEQLELSIQD---LERANHRLAV------DHAADKKHIKS 500
E L K LR +N ++ E+++L ++ L+ N +L H +++KH S
Sbjct: 153 EALHKDKENLR-INLNKAE--EEVKLLFEENKILDEENKKLLALLEKERQHRSERKHSSS 209
>04_04_1650 -
35051728-35051823,35052054-35052162,35052270-35052416,
35052516-35052637,35052726-35052825,35052895-35053095,
35053202-35053407,35053778-35053803,35054239-35054327,
35054427-35054635,35055577-35055672,35055754-35055924
Length = 523
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 330 DQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL 461
D+ +EY + R ND R+ E L +I LE HRL
Sbjct: 111 DKLTSVEYFFTSKIRCRVGNDVHERVNELLSKAIHGLENEFHRL 154
>04_04_0904 +
29281572-29281753,29283702-29283786,29284190-29284251,
29284337-29284436,29285140-29285181,29286542-29286583,
29286743-29286882,29286970-29287066
Length = 249
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +3
Query: 210 ELECLQGTEDLQLAAELG----KTLLERNKELETALRQ-HQNVIEDQAQEIEYLTKQTVA 374
+LECLQ ++ L +LG K L + K+LE +L Q Q + ++++ L ++
Sbjct: 101 KLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQ 160
Query: 375 LREVN 389
L E+N
Sbjct: 161 LGELN 165
>02_01_0642 - 4803464-4805665,4806231-4806320
Length = 763
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/87 (20%), Positives = 43/87 (49%)
Frame = +3
Query: 285 KELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLA 464
+ ++ A+++ + + + + + + + V L+++ DS+ Q+ +QD E+ H
Sbjct: 477 ESIQIAVQEKDSELSETQRRLAEVNSEVVELKQLLDSKEDQLVQVRTELQDKEQ--HIQT 534
Query: 465 VDHAADKKHIKSLCSNIDTVEAKCEEL 545
+ + D +K CS ++V K EL
Sbjct: 535 LQNKLDS--MKFSCSQAESVVQKIAEL 559
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 264 KTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLE 422
KT+ N+ELE ++Q Q E + L + T +L E+N S L + ++LE
Sbjct: 628 KTVTTLNRELEALVKQLQMDSEARKALEADLDEATKSLDEMNRSALSLSKELE 680
>07_01_0020 -
127855-129156,129240-129365,129811-129865,130047-130177
Length = 537
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 210 ELECLQGTEDLQLAAELGKTLLERN-KEL-ETALRQHQNVIEDQAQEIEYLTKQTVALRE 383
ELE G ++A + ER +EL E A + +E+ E+E L ++ V++RE
Sbjct: 197 ELEGANGKLVKEVARARQRVETERKARELMEEACEELSKEVEEDQAEVEALRRECVSMRE 256
Query: 384 VNDSRLRIYEQLEL 425
+ R+ + E+
Sbjct: 257 EMEEERRMLQMAEV 270
>05_03_0013 +
7362056-7362471,7363235-7364081,7364272-7364758,
7365062-7365126,7365275-7365643
Length = 727
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 270 LLERNKELETALRQHQNVIEDQAQEIEYLTKQTVAL----REVNDSRLRIYEQLELSIQD 437
LL R KELE + HQ V ++A + L + L ++V +R E+ ++Q+
Sbjct: 492 LLARRKELEKLVLSHQEVSRERAISEDKLKARISDLEKEKKQVEFARQAEEEKTTSALQE 551
Query: 438 LERANHRL 461
L+ A +L
Sbjct: 552 LDNARQQL 559
>04_04_0076 +
22558105-22558261,22558356-22558405,22559837-22560044,
22560112-22560237,22560469-22560567,22560729-22561405,
22561483-22561731,22561808-22561936,22562021-22562089,
22562183-22562256,22563086-22563098,22563361-22563468,
22563541-22563651,22563725-22563811,22564043-22564068,
22564840-22564906,22565123-22565212,22565295-22565387,
22565515-22565604,22565699-22565761,22566349-22566447
Length = 894
Score = 27.9 bits (59), Expect = 5.9
Identities = 25/97 (25%), Positives = 41/97 (42%)
Frame = +3
Query: 255 ELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQ 434
EL ++E K E + QH + +I L + E++ S + QLE
Sbjct: 367 ELKSRIIELQKTQEIVMVQHVEECQVAEDKIRRLESEA----EISASNI---SQLEKVAS 419
Query: 435 DLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEEL 545
DLE +L D + + H + L I +E+ +EL
Sbjct: 420 DLEGRVQKLLEDSRSAENHKQELLQKILKLESDNQEL 456
>04_01_0290 + 3843610-3843712,3844088-3846003
Length = 672
Score = 27.9 bits (59), Expect = 5.9
Identities = 21/98 (21%), Positives = 48/98 (48%)
Frame = +3
Query: 255 ELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQ 434
E+ ++L N +L + + A E+E L K+ VAL EV + + +
Sbjct: 93 EVERSLKGENDKLRLEVLTAEEKYSQSAAEVEKLQKELVALAEVKEVAAKAF-------- 144
Query: 435 DLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQ 548
D E+A ++ ++ K ++ + N+D ++++ ++L+
Sbjct: 145 DDEKA--KMMMESVDLKSRLEEIQGNMDMIKSENDKLR 180
>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 27.9 bits (59), Expect = 5.9
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Frame = +3
Query: 288 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL-----ELSIQDLERAN 452
E + ++ Q + + + E L + L+ +S + L EL Q LE
Sbjct: 835 EFKQKQQEAQRKLSEAQDDSEVLRRSNSKLQSTVESLIEECSSLQNQIAELKRQKLELHG 894
Query: 453 HRLAVDHAAD--KKHIKSLCSNIDTVEAKCEELQKTV 557
H + D KK C ++ +EAK LQK +
Sbjct: 895 HLTQQEQELDNSKKRNLDFCKTVEFLEAKLSSLQKDI 931
>09_04_0199 -
15533619-15534107,15534956-15535362,15535559-15535862,
15537061-15538397,15539463-15539727
Length = 933
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 279 RNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSR 398
RN++LE + Q NV+ Q +EI + T + R++N ++
Sbjct: 385 RNRQLELSTFQIINVVGSQLKEIGFWTAKHGIFRQLNKNK 424
>07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,
2916053-2916113,2916243-2916365,2916505-2916537,
2916617-2916709,2916839-2916934,2917025-2917203,
2917344-2917530,2918051-2918184,2918311-2918518,
2918598-2918633,2918785-2919241,2919633-2919736,
2920489-2920569,2920646-2920697,2920837-2920876,
2920991-2921085,2921241-2921383,2921899-2922006,
2922120-2922221,2922302-2922348,2922425-2922554,
2923173-2923304,2923404-2923616,2923709-2923963,
2924053-2924799
Length = 1460
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 267 TLLERNKELETALRQHQNVIEDQAQEIEYLTK--QTVALREVNDSRLRIYEQLELSIQDL 440
T L+ LET QH ++I + ++ TK QT+ R I ++ ++ + L
Sbjct: 1282 TFLKAFNFLETHFGQHNDIILQMIKSLQKATKTIQTICAEAKGHKRTMITSKIPVAKRSL 1341
Query: 441 ER 446
ER
Sbjct: 1342 ER 1343
>06_03_0672 +
23359510-23361253,23389969-23390203,23392078-23392234,
23392535-23392597
Length = 732
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/52 (21%), Positives = 29/52 (55%)
Frame = +3
Query: 306 RQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL 461
R+ ++ + + + ++ L + V+ ++ + + +LE ++DLER+N L
Sbjct: 645 RRGRSPADKEHRRLKRLLRNRVSAQQARERKKAYMSELEARVKDLERSNSEL 696
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,409,527
Number of Sequences: 37544
Number of extensions: 269360
Number of successful extensions: 827
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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