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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5o15
         (561 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0721 - 10677286-10678018,10679293-10679373,10682516-106826...    32   0.36 
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324...    32   0.36 
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773...    31   0.63 
09_02_0234 - 6116931-6117052,6117549-6118369,6118573-6118601,611...    30   1.1  
02_05_0548 + 29896648-29896701,29896818-29897021,29897451-298977...    30   1.1  
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282...    30   1.5  
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029...    29   1.9  
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039...    29   1.9  
07_03_1791 - 29552218-29552427,29552858-29553358,29560369-295604...    29   2.5  
07_01_0987 + 8320205-8320472,8321549-8321690,8321773-8321893,832...    29   2.5  
04_04_1396 + 33227126-33227846,33228530-33228637,33228825-33230029     29   2.5  
04_01_0164 + 1858758-1858953,1859178-1859485                           29   2.5  
02_05_1335 - 35770403-35770543,35770630-35770755,35770859-357709...    29   2.5  
04_04_1650 - 35051728-35051823,35052054-35052162,35052270-350524...    29   3.4  
04_04_0904 + 29281572-29281753,29283702-29283786,29284190-292842...    29   3.4  
02_01_0642 - 4803464-4805665,4806231-4806320                           28   4.4  
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421...    28   4.4  
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13...    28   5.9  
05_03_0013 + 7362056-7362471,7363235-7364081,7364272-7364758,736...    28   5.9  
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600...    28   5.9  
04_01_0290 + 3843610-3843712,3844088-3846003                           28   5.9  
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42...    28   5.9  
09_04_0199 - 15533619-15534107,15534956-15535362,15535559-155358...    27   7.7  
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291...    27   7.7  
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922...    27   7.7  

>03_02_0721 -
           10677286-10678018,10679293-10679373,10682516-10682645,
           10682969-10683101
          Length = 358

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = -1

Query: 300 LSRVPCCVRVGFSRVRPPVANLQFLAGTPARRCSPKDQENSTRSVPKN 157
           + R PCC +VG  R R      + LAG  A     K  E S RS+PKN
Sbjct: 1   MGRAPCCEKVGLKRGRWTTEEDEKLAGYIA-----KHGEGSWRSLPKN 43


>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
            3242494-3242836,3244138-3248540,3248928-3249107,
            3249108-3250892,3251055-3252173
          Length = 2727

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
 Frame = +3

Query: 216  ECLQGTEDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALRE---V 386
            + +Q  + L+   E  + L ERN+EL   LR  +  +ED       L K+   L E   V
Sbjct: 2139 QLMQKDDKLRKVDEKVQFLQERNQELCRVLRDLEVAVEDAEGVKVDLEKKITTLTERGAV 2198

Query: 387  NDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTV 557
             D+  R+          L  AN+ L V+    ++  +SL S  +T+  + E+ ++ +
Sbjct: 2199 QDNETRL----------LREANNTLQVEVGIHEQKEESLMSTFETMRKEAEQHEREI 2245


>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
            20878057-20878177,20878414-20878451,20879096-20879218,
            20879308-20879505,20880270-20880356
          Length = 1578

 Score = 31.1 bits (67), Expect = 0.63
 Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
 Frame = +3

Query: 207  VELECLQGTEDLQLAAELGKTL--LERNK-ELETALRQHQNVIEDQAQEIEYLTKQTVAL 377
            VEL+ LQ  E   L   L   L  +E  K EL+  + + +++I +   E+E +  Q V L
Sbjct: 834  VELK-LQMDESRSLITNLKDELEQVEAQKVELKLQMDESRSLITNLKDELEQVEAQKVEL 892

Query: 378  REVNDSRLRIYEQLELSIQDLERANHRL--AVDHAADK-KHIKSLCSNI 515
            +E      R   +++   + L R+N +L   VDH  ++ K +++L +++
Sbjct: 893  KENQLESHRRLSEVQEDSEALRRSNAKLQATVDHVVEECKSLQTLTADL 941


>09_02_0234 -
           6116931-6117052,6117549-6118369,6118573-6118601,
           6118711-6119020,6119469-6119476,6120104-6120232,
           6120341-6120445
          Length = 507

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 111 LDVKMSEEQEQCDSFNSWELNGLNSLD 191
           + VK S+++ +CD F SWE   ++ +D
Sbjct: 444 IKVKCSQDKVKCDFFTSWERENIHGID 470


>02_05_0548 +
           29896648-29896701,29896818-29897021,29897451-29897708,
           29897821-29898036,29898130-29898285,29898396-29898707,
           29898795-29898882,29899055-29899203,29899390-29899722
          Length = 589

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +3

Query: 255 ELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYE--QLELS 428
           +LGK   ER KEL     + + +  + A  +E    Q VAL ++N+  L + +  + +L 
Sbjct: 107 QLGKKKKERIKELANIQSRIEQIRGEIAGTLEM--GQQVALPQINEDDLTVRKLREFQLQ 164

Query: 429 IQDLERANHR 458
           +Q+LE+   R
Sbjct: 165 LQELEKEKSR 174


>11_06_0656 +
           25926192-25926289,25927530-25927659,25928248-25928294,
           25929274-25929388,25929504-25929753,25930079-25930239,
           25930372-25930567,25930672-25930836,25930918-25931070,
           25931160-25931248,25931385-25931423,25931460-25931681,
           25933503-25934165
          Length = 775

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +3

Query: 111 LDVKMSEEQEQCDSFNSWEL--NGLNSLDLWDYTVELECLQGTEDLQLAAELGKT 269
           L+V  S++Q      N+ E+  NGL+  +  D+   L+ + G  D+QL +   KT
Sbjct: 418 LEVSSSQQQHSLGHINTAEIDGNGLSHANPSDWNSSLDWIHGHADVQLESMRSKT 472


>08_02_1453 -
           27199228-27200579,27200712-27202646,27202905-27202966,
           27203525-27203545,27204305-27204344,27204345-27204792,
           27204866-27204964,27205071-27205394,27205446-27205574,
           27205657-27205875,27205976-27206194,27206436-27206669,
           27206773-27206943,27207466-27207577,27207955-27208010,
           27208083-27208181,27208901-27209134,27209258-27209311,
           27209363-27209422
          Length = 1955

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = +3

Query: 270 LLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERA 449
           L E+ KEL T  R+  N   ++AQ ++ +      LRE     L + EQ   +  ++   
Sbjct: 157 LREQTKELATFRRERDNSEAERAQHLKQIHDLQEHLREKESQMLALEEQHRAAQDNIIYK 216

Query: 450 NHRLAVDHA 476
           + +L   HA
Sbjct: 217 DEQLREAHA 225


>02_05_0484 - 29401195-29401404,29401572-29401755,29401866-29403973,
            29404320-29404403,29404507-29404777,29404864-29405117,
            29405513-29405722,29406357-29406503
          Length = 1155

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 36/167 (21%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
 Frame = +3

Query: 27   SRRRDHQNFNNEIWLQLN*KRRTRRQ*TLDVKMSEEQEQCDSFNSWELNGLNSLDLWDYT 206
            +++ +++  N E W     KR   R+  LD+K    +EQ ++    E + ++++D     
Sbjct: 526  AKKLNNEKKNLERWHDNEEKRLKDREDELDIKY---KEQGENLALKEKSLIDNIDHQRLE 582

Query: 207  VELECLQGTEDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEI----EYLTKQTVA 374
             E    +   DLQ   +L +  LE   E + A ++ +  +E++  E+    +++  +   
Sbjct: 583  NEELLKRERADLQRNLQLHRHELEMEMEKKQASKERE--LEEKENELNRKMDFVENELKR 640

Query: 375  LREVNDSRLRIY----EQLELSIQDLERANHRLAVDHAADKKHIKSL 503
              E+N+S+++      +QL+   + L     +L  D A  ++ I SL
Sbjct: 641  AAELNESKIQKILLEKKQLQKEKEVLVEDRQKLETDKADIRRDIDSL 687


>07_03_1791 -
           29552218-29552427,29552858-29553358,29560369-29560449,
           29563783-29564015,29564976-29565042
          Length = 363

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = +3

Query: 222 LQGTEDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRL 401
           + GT    ++  L K     +KEL  + R+     ++QAQ  + L ++  AL E    R 
Sbjct: 102 ISGTLGALVSIPLLKVETHGSKELHLSQREQDARSQEQAQRAQELERRAKALEE----RA 157

Query: 402 RIYEQLELSIQDLER 446
           R+ +Q E ++   ER
Sbjct: 158 RLLDQRESTLASHER 172


>07_01_0987 +
           8320205-8320472,8321549-8321690,8321773-8321893,
           8322190-8322264,8322784-8322846,8322934-8323086
          Length = 273

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 282 NKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL 419
           NKE    ++QH   + D ++EIE   K    + EV +  L   E++
Sbjct: 133 NKEYGPVIKQHMQYVLDHSEEIEKTLKVQAQVSEVKNIMLENIEKV 178


>04_04_1396 + 33227126-33227846,33228530-33228637,33228825-33230029
          Length = 677

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +3

Query: 228 GTEDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRI 407
           G ED ++ A+L +  L    E    +RQ +  +ED  +    L  Q   +   N  + + 
Sbjct: 591 GAEDAKVVAKLAEACLRLKGEERPTMRQVETTLEDVQRSKVQLNHQIARVSNSNTLKNQT 650

Query: 408 YE 413
           YE
Sbjct: 651 YE 652


>04_01_0164 + 1858758-1858953,1859178-1859485
          Length = 167

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 229 ELKICNWRPNSGKPYSNATRNSRQP 303
           E+K+C WRP  G   +   R  RQP
Sbjct: 143 EVKLCPWRPRQGGCSTGQCRGRRQP 167


>02_05_1335 -
           35770403-35770543,35770630-35770755,35770859-35770942,
           35771444-35771656,35771759-35771977
          Length = 260

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 9/120 (7%)
 Frame = +3

Query: 168 LNGLNSLDLWDYTVELECLQGTEDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEI 347
           ++  N L      +E EC     DL+ A E    L + N E+   L  H   +     ++
Sbjct: 94  VSAYNDLSSHSTKLERECTLYERDLERAMESCDDLAKENDEMRARLNDH-TTLSALTTQV 152

Query: 348 EYLTKQTVALREVNDSRLRIYEQLELSIQD---LERANHRLAV------DHAADKKHIKS 500
           E L K    LR +N ++    E+++L  ++   L+  N +L         H +++KH  S
Sbjct: 153 EALHKDKENLR-INLNKAE--EEVKLLFEENKILDEENKKLLALLEKERQHRSERKHSSS 209


>04_04_1650 -
           35051728-35051823,35052054-35052162,35052270-35052416,
           35052516-35052637,35052726-35052825,35052895-35053095,
           35053202-35053407,35053778-35053803,35054239-35054327,
           35054427-35054635,35055577-35055672,35055754-35055924
          Length = 523

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 330 DQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL 461
           D+   +EY     +  R  ND   R+ E L  +I  LE   HRL
Sbjct: 111 DKLTSVEYFFTSKIRCRVGNDVHERVNELLSKAIHGLENEFHRL 154


>04_04_0904 +
           29281572-29281753,29283702-29283786,29284190-29284251,
           29284337-29284436,29285140-29285181,29286542-29286583,
           29286743-29286882,29286970-29287066
          Length = 249

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +3

Query: 210 ELECLQGTEDLQLAAELG----KTLLERNKELETALRQ-HQNVIEDQAQEIEYLTKQTVA 374
           +LECLQ ++   L  +LG    K L +  K+LE +L Q  Q   +   ++++ L ++   
Sbjct: 101 KLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQ 160

Query: 375 LREVN 389
           L E+N
Sbjct: 161 LGELN 165


>02_01_0642 - 4803464-4805665,4806231-4806320
          Length = 763

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 18/87 (20%), Positives = 43/87 (49%)
 Frame = +3

Query: 285 KELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLA 464
           + ++ A+++  + + +  + +  +  + V L+++ DS+     Q+   +QD E+  H   
Sbjct: 477 ESIQIAVQEKDSELSETQRRLAEVNSEVVELKQLLDSKEDQLVQVRTELQDKEQ--HIQT 534

Query: 465 VDHAADKKHIKSLCSNIDTVEAKCEEL 545
           + +  D   +K  CS  ++V  K  EL
Sbjct: 535 LQNKLDS--MKFSCSQAESVVQKIAEL 559


>01_01_0568 -
           4207812-4209587,4210056-4210291,4210647-4210793,
           4211857-4212145
          Length = 815

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +3

Query: 264 KTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLE 422
           KT+   N+ELE  ++Q Q   E +      L + T +L E+N S L + ++LE
Sbjct: 628 KTVTTLNRELEALVKQLQMDSEARKALEADLDEATKSLDEMNRSALSLSKELE 680


>07_01_0020 -
           127855-129156,129240-129365,129811-129865,130047-130177
          Length = 537

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +3

Query: 210 ELECLQGTEDLQLAAELGKTLLERN-KEL-ETALRQHQNVIEDQAQEIEYLTKQTVALRE 383
           ELE   G    ++A    +   ER  +EL E A  +    +E+   E+E L ++ V++RE
Sbjct: 197 ELEGANGKLVKEVARARQRVETERKARELMEEACEELSKEVEEDQAEVEALRRECVSMRE 256

Query: 384 VNDSRLRIYEQLEL 425
             +   R+ +  E+
Sbjct: 257 EMEEERRMLQMAEV 270


>05_03_0013 +
           7362056-7362471,7363235-7364081,7364272-7364758,
           7365062-7365126,7365275-7365643
          Length = 727

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +3

Query: 270 LLERNKELETALRQHQNVIEDQAQEIEYLTKQTVAL----REVNDSRLRIYEQLELSIQD 437
           LL R KELE  +  HQ V  ++A   + L  +   L    ++V  +R    E+   ++Q+
Sbjct: 492 LLARRKELEKLVLSHQEVSRERAISEDKLKARISDLEKEKKQVEFARQAEEEKTTSALQE 551

Query: 438 LERANHRL 461
           L+ A  +L
Sbjct: 552 LDNARQQL 559


>04_04_0076 +
           22558105-22558261,22558356-22558405,22559837-22560044,
           22560112-22560237,22560469-22560567,22560729-22561405,
           22561483-22561731,22561808-22561936,22562021-22562089,
           22562183-22562256,22563086-22563098,22563361-22563468,
           22563541-22563651,22563725-22563811,22564043-22564068,
           22564840-22564906,22565123-22565212,22565295-22565387,
           22565515-22565604,22565699-22565761,22566349-22566447
          Length = 894

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 25/97 (25%), Positives = 41/97 (42%)
 Frame = +3

Query: 255 ELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQ 434
           EL   ++E  K  E  + QH    +    +I  L  +     E++ S +    QLE    
Sbjct: 367 ELKSRIIELQKTQEIVMVQHVEECQVAEDKIRRLESEA----EISASNI---SQLEKVAS 419

Query: 435 DLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEEL 545
           DLE    +L  D  + + H + L   I  +E+  +EL
Sbjct: 420 DLEGRVQKLLEDSRSAENHKQELLQKILKLESDNQEL 456


>04_01_0290 + 3843610-3843712,3844088-3846003
          Length = 672

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 21/98 (21%), Positives = 48/98 (48%)
 Frame = +3

Query: 255 ELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQ 434
           E+ ++L   N +L   +   +      A E+E L K+ VAL EV +   + +        
Sbjct: 93  EVERSLKGENDKLRLEVLTAEEKYSQSAAEVEKLQKELVALAEVKEVAAKAF-------- 144

Query: 435 DLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQ 548
           D E+A  ++ ++    K  ++ +  N+D ++++ ++L+
Sbjct: 145 DDEKA--KMMMESVDLKSRLEEIQGNMDMIKSENDKLR 180


>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
            420334-420502,421115-424273,424367-424485,424915-425116
          Length = 1363

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
 Frame = +3

Query: 288  ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL-----ELSIQDLERAN 452
            E +   ++ Q  + +   + E L +    L+   +S +     L     EL  Q LE   
Sbjct: 835  EFKQKQQEAQRKLSEAQDDSEVLRRSNSKLQSTVESLIEECSSLQNQIAELKRQKLELHG 894

Query: 453  HRLAVDHAAD--KKHIKSLCSNIDTVEAKCEELQKTV 557
            H    +   D  KK     C  ++ +EAK   LQK +
Sbjct: 895  HLTQQEQELDNSKKRNLDFCKTVEFLEAKLSSLQKDI 931


>09_04_0199 -
           15533619-15534107,15534956-15535362,15535559-15535862,
           15537061-15538397,15539463-15539727
          Length = 933

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +3

Query: 279 RNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSR 398
           RN++LE +  Q  NV+  Q +EI + T +    R++N ++
Sbjct: 385 RNRQLELSTFQIINVVGSQLKEIGFWTAKHGIFRQLNKNK 424


>07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,
            2916053-2916113,2916243-2916365,2916505-2916537,
            2916617-2916709,2916839-2916934,2917025-2917203,
            2917344-2917530,2918051-2918184,2918311-2918518,
            2918598-2918633,2918785-2919241,2919633-2919736,
            2920489-2920569,2920646-2920697,2920837-2920876,
            2920991-2921085,2921241-2921383,2921899-2922006,
            2922120-2922221,2922302-2922348,2922425-2922554,
            2923173-2923304,2923404-2923616,2923709-2923963,
            2924053-2924799
          Length = 1460

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +3

Query: 267  TLLERNKELETALRQHQNVIEDQAQEIEYLTK--QTVALREVNDSRLRIYEQLELSIQDL 440
            T L+    LET   QH ++I    + ++  TK  QT+        R  I  ++ ++ + L
Sbjct: 1282 TFLKAFNFLETHFGQHNDIILQMIKSLQKATKTIQTICAEAKGHKRTMITSKIPVAKRSL 1341

Query: 441  ER 446
            ER
Sbjct: 1342 ER 1343


>06_03_0672 +
           23359510-23361253,23389969-23390203,23392078-23392234,
           23392535-23392597
          Length = 732

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/52 (21%), Positives = 29/52 (55%)
 Frame = +3

Query: 306 RQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL 461
           R+ ++  + + + ++ L +  V+ ++  + +     +LE  ++DLER+N  L
Sbjct: 645 RRGRSPADKEHRRLKRLLRNRVSAQQARERKKAYMSELEARVKDLERSNSEL 696


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,409,527
Number of Sequences: 37544
Number of extensions: 269360
Number of successful extensions: 827
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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