Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5o15
(561 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 26 0.23
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 26 0.23
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 25 0.40
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 3.7
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 3.7
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 3.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 4.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 4.9
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.9
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 26.2 bits (55), Expect = 0.23
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 356 KIFDFLCLIFNNILMLAKGCLEFLVAFE*GFP 261
+IF+ +C++ ++ GCL+FLV GFP
Sbjct: 278 RIFNLICMML--LIGHWSGCLQFLVPMLQGFP 307
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 26.2 bits (55), Expect = 0.23
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 356 KIFDFLCLIFNNILMLAKGCLEFLVAFE*GFP 261
+IF+ +C++ ++ GCL+FLV GFP
Sbjct: 246 RIFNLICMML--LIGHWSGCLQFLVPMLQGFP 275
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 25.4 bits (53), Expect = 0.40
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 6 CSVTPRCSRRRDHQNFNNEIWLQLN*KRRTRRQ*TLDVKMSEEQEQCDSFNSWELNGLN 182
C +T C+ + H N+EI L + R+ ++DVKM E + NGLN
Sbjct: 77 CFIT--CALEKSHIIQNDEIQLDKLVEMANRKNISIDVKMLSECINANKSTDKCENGLN 133
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 450 NHRLAVDHAADKKHIKSLCSNID 518
NH + A K ++KSL SN D
Sbjct: 249 NHEKMLREQAKKMNVKSLVSNQD 271
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 450 NHRLAVDHAADKKHIKSLCSNID 518
NH + A K ++KSL SN D
Sbjct: 249 NHEKMLREQAKKMNVKSLVSNQD 271
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 487 NTLSHYAQTLTLWRPNAKNYKRL 555
+T + ++QT W P +NYK L
Sbjct: 431 STSAGFSQTNKTWLPVNENYKSL 453
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 264 SRVRPPVANLQFLAGTPARRCSPKDQENSTRSVP 163
S PP ++ GTP P E+++ S+P
Sbjct: 357 SAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 390
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 264 SRVRPPVANLQFLAGTPARRCSPKDQENSTRSVP 163
S PP ++ GTP P E+++ S+P
Sbjct: 357 SAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 390
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 264 SRVRPPVANLQFLAGTPARRCSPKDQENSTRSVP 163
S PP ++ GTP P E+++ S+P
Sbjct: 357 SAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 390
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 264 SRVRPPVANLQFLAGTPARRCSPKDQENSTRSVP 163
S PP ++ GTP P E+++ S+P
Sbjct: 357 SAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 390
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 264 SRVRPPVANLQFLAGTPARRCSPKDQENSTRSVP 163
S PP ++ GTP P E+++ S+P
Sbjct: 357 SAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 390
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 264 SRVRPPVANLQFLAGTPARRCSPKDQENSTRSVP 163
S PP ++ GTP P E+++ S+P
Sbjct: 357 SAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 390
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 264 SRVRPPVANLQFLAGTPARRCSPKDQENSTRSVP 163
S PP ++ GTP P E+++ S+P
Sbjct: 425 SAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 458
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 264 SRVRPPVANLQFLAGTPARRCSPKDQENSTRSVP 163
S PP ++ GTP P E+++ S+P
Sbjct: 425 SAANPPSGYIRSAFGTPISTGRPATVEDTSASLP 458
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 131 LAHFNVQSSLTT 96
L HF +QSS+TT
Sbjct: 263 LKHFTIQSSVTT 274
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,527
Number of Sequences: 438
Number of extensions: 2511
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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