Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5o11
         (639 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003598-1|AAO39601.1|  559|Drosophila melanogaster GM10512p pro...    64   2e-10
AY061834-1|AAL27645.1|  536|Drosophila melanogaster SD10476p pro...    63   3e-10
AE014297-3668|AAF56366.2|  536|Drosophila melanogaster CG31120-P...    63   3e-10
BT023382-1|AAY55798.1|  265|Drosophila melanogaster IP10372p pro...    30   2.3  
BT023334-1|AAY55750.1|  265|Drosophila melanogaster IP10172p pro...    30   2.3  
AE014297-1054|AAF54463.2|  265|Drosophila melanogaster CG9459-PA...    30   2.3  
BT001295-1|AAN71050.1|  536|Drosophila melanogaster AT11052p pro...    30   3.0  
AE013599-3570|AAM68240.2|  539|Drosophila melanogaster CG30416-P...    30   3.0  
X78421-1|CAA55186.1|  805|Drosophila melanogaster E2F protein.         28   9.3  
U10184-1|AAA19003.1|  805|Drosophila melanogaster drosE2F1 protein.    28   9.3  
BT016096-1|AAV36981.1|  805|Drosophila melanogaster LD35741p pro...    28   9.3  
AE014297-3023|AAN13879.1|  805|Drosophila melanogaster CG6376-PC...    28   9.3  
AE014297-3022|AAN13878.1|  805|Drosophila melanogaster CG6376-PB...    28   9.3  
AE014297-3021|AAF55904.1|  805|Drosophila melanogaster CG6376-PA...    28   9.3  
AB011813-2|BAA32746.1|  805|Drosophila melanogaster E2F protein.       28   9.3  

>BT003598-1|AAO39601.1|  559|Drosophila melanogaster GM10512p
           protein.
          Length = 559

 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 30/108 (27%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
 Frame = +3

Query: 147 TRPVLKMGSENNIS----NADESN-RMWASASFVGVLIIIGMPLWWKTTEVYRVSLPYEK 311
           TR +++  S + +     + DE   R+ A+ +F+ V+I IG+P+WW+TT VYRV+LP  +
Sbjct: 20  TRSIMETSSSSPVKPRRKDKDEDKFRIGATLAFIVVIIGIGVPMWWRTTTVYRVNLPSTE 79

Query: 312 ISSFKPLSHFVTTELKVLANDDATASKIVSEIQKAFAESDIIKIKIEK 455
           I S   +      ++ +     +    +++E+Q AF++++I  ++ ++
Sbjct: 80  ILSLSKIPIKTAVQVAIYTQQTSRGQLLIAELQNAFSDNEIWSVEFKQ 127


>AY061834-1|AAL27645.1|  536|Drosophila melanogaster SD10476p
           protein.
          Length = 536

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 25/87 (28%), Positives = 54/87 (62%)
 Frame = +3

Query: 195 DESNRMWASASFVGVLIIIGMPLWWKTTEVYRVSLPYEKISSFKPLSHFVTTELKVLAND 374
           ++  R+ A+ +F+ V+I IG+P+WW+TT VYRV+LP  +I S   +      ++ +    
Sbjct: 18  EDKFRIGATLAFIVVIIGIGVPMWWRTTTVYRVNLPSTEILSLSKIPIKTAVQVAIYTQQ 77

Query: 375 DATASKIVSEIQKAFAESDIIKIKIEK 455
            +    +++E+Q AF++++I  ++ ++
Sbjct: 78  TSRGQLLIAELQNAFSDNEIWSVEFKQ 104


>AE014297-3668|AAF56366.2|  536|Drosophila melanogaster CG31120-PB,
           isoform B protein.
          Length = 536

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 25/87 (28%), Positives = 54/87 (62%)
 Frame = +3

Query: 195 DESNRMWASASFVGVLIIIGMPLWWKTTEVYRVSLPYEKISSFKPLSHFVTTELKVLAND 374
           ++  R+ A+ +F+ V+I IG+P+WW+TT VYRV+LP  +I S   +      ++ +    
Sbjct: 18  EDKFRIGATLAFIVVIIGIGVPMWWRTTTVYRVNLPSTEILSLSKIPIKTAVQVAIYTQQ 77

Query: 375 DATASKIVSEIQKAFAESDIIKIKIEK 455
            +    +++E+Q AF++++I  ++ ++
Sbjct: 78  TSRGQLLIAELQNAFSDNEIWSVEFKQ 104


>BT023382-1|AAY55798.1|  265|Drosophila melanogaster IP10372p
           protein.
          Length = 265

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 158 HWPCLLIANYYEVYYNHCSLFFLQNEFKVYVINRKNTTFTVYQL 27
           HWP L I   Y V+      +F+QN+ K Y ++R    + + Q+
Sbjct: 25  HWPVLTILGIYLVFIKIVGPWFMQNQ-KPYNLDRAIKIYNIVQI 67


>BT023334-1|AAY55750.1|  265|Drosophila melanogaster IP10172p
           protein.
          Length = 265

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 158 HWPCLLIANYYEVYYNHCSLFFLQNEFKVYVINRKNTTFTVYQL 27
           HWP L I   Y V+      +F+QN+ K Y ++R    + + Q+
Sbjct: 25  HWPVLTILGIYLVFIKIVGPWFMQNQ-KPYNLDRAIKIYNIVQI 67


>AE014297-1054|AAF54463.2|  265|Drosophila melanogaster CG9459-PA
           protein.
          Length = 265

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 158 HWPCLLIANYYEVYYNHCSLFFLQNEFKVYVINRKNTTFTVYQL 27
           HWP L I   Y V+      +F+QN+ K Y ++R    + + Q+
Sbjct: 25  HWPVLTILGIYLVFIKIVGPWFMQNQ-KPYNLDRAIKIYNIVQI 67


>BT001295-1|AAN71050.1|  536|Drosophila melanogaster AT11052p
           protein.
          Length = 536

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +3

Query: 294 SLPYEKI--SSFKPLSHFVTTELKVLANDDATASKIVSEIQKAFAESDIIKIKIEKTVM 464
           ++PY  +  S  +PL   +  E+ +  + DA    +  E +K   + D  K K+EKT++
Sbjct: 218 AIPYRAMRHSELEPLLVSMRAEVPITESKDAKEEIVYQEYEKTERDFDDPKAKVEKTII 276


>AE013599-3570|AAM68240.2|  539|Drosophila melanogaster CG30416-PA
           protein.
          Length = 539

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +3

Query: 294 SLPYEKI--SSFKPLSHFVTTELKVLANDDATASKIVSEIQKAFAESDIIKIKIEKTVM 464
           ++PY  +  S  +PL   +  E+ +  + DA    +  E +K   + D  K K+EKT++
Sbjct: 218 AIPYRAMRHSELEPLLVSMRAEVPITESKDAKEEIVYQEYEKTERDFDDPKAKVEKTII 276


>X78421-1|CAA55186.1|  805|Drosophila melanogaster E2F protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 450 EKTVMSERQQHILRSVVDMEKAVEELASTLDLDQENIFHVVQK 578
           +  V  ER +HI    + +E+   EL   +DL +EN+  + Q+
Sbjct: 321 QSMVSQERSRHIEADSLRLEQQENELNKAIDLMRENLAEISQE 363


>U10184-1|AAA19003.1|  805|Drosophila melanogaster drosE2F1 protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 450 EKTVMSERQQHILRSVVDMEKAVEELASTLDLDQENIFHVVQK 578
           +  V  ER +HI    + +E+   EL   +DL +EN+  + Q+
Sbjct: 321 QSMVSQERSRHIEADSLRLEQQENELNKAIDLMRENLAEISQE 363


>BT016096-1|AAV36981.1|  805|Drosophila melanogaster LD35741p
           protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 450 EKTVMSERQQHILRSVVDMEKAVEELASTLDLDQENIFHVVQK 578
           +  V  ER +HI    + +E+   EL   +DL +EN+  + Q+
Sbjct: 321 QSMVSQERSRHIEADSLRLEQQENELNKAIDLMRENLAEISQE 363


>AE014297-3023|AAN13879.1|  805|Drosophila melanogaster CG6376-PC,
           isoform C protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 450 EKTVMSERQQHILRSVVDMEKAVEELASTLDLDQENIFHVVQK 578
           +  V  ER +HI    + +E+   EL   +DL +EN+  + Q+
Sbjct: 321 QSMVSQERSRHIEADSLRLEQQENELNKAIDLMRENLAEISQE 363


>AE014297-3022|AAN13878.1|  805|Drosophila melanogaster CG6376-PB,
           isoform B protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 450 EKTVMSERQQHILRSVVDMEKAVEELASTLDLDQENIFHVVQK 578
           +  V  ER +HI    + +E+   EL   +DL +EN+  + Q+
Sbjct: 321 QSMVSQERSRHIEADSLRLEQQENELNKAIDLMRENLAEISQE 363


>AE014297-3021|AAF55904.1|  805|Drosophila melanogaster CG6376-PA,
           isoform A protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 450 EKTVMSERQQHILRSVVDMEKAVEELASTLDLDQENIFHVVQK 578
           +  V  ER +HI    + +E+   EL   +DL +EN+  + Q+
Sbjct: 321 QSMVSQERSRHIEADSLRLEQQENELNKAIDLMRENLAEISQE 363


>AB011813-2|BAA32746.1|  805|Drosophila melanogaster E2F protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 450 EKTVMSERQQHILRSVVDMEKAVEELASTLDLDQENIFHVVQK 578
           +  V  ER +HI    + +E+   EL   +DL +EN+  + Q+
Sbjct: 321 QSMVSQERSRHIEADSLRLEQQENELNKAIDLMRENLAEISQE 363


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,314,427
Number of Sequences: 53049
Number of extensions: 541566
Number of successful extensions: 2038
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2038
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)