Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5o11
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68880-4|CAA93093.1|  544|Caenorhabditis elegans Hypothetical pr...    37   0.011
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    35   0.056
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    35   0.056
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    35   0.056
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      35   0.056
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical...    29   2.8  
Z69883-4|CAA93742.2|  480|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81083-3|CAB03104.1|  559|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U29380-12|AAR12986.1|  485|Caenorhabditis elegans Hypothetical p...    27   8.6  
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical...    27   8.6  
AF038614-2|AAB92061.2|  321|Caenorhabditis elegans Serpentine re...    27   8.6  

>Z68880-4|CAA93093.1|  544|Caenorhabditis elegans Hypothetical
           protein T14G10.7 protein.
          Length = 544

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +3

Query: 180 NISNADESNRMWASASFVGVLIIIGMPLWWKTTEVYRVSLP 302
           N  +++   ++ AS SFV ++  IGMP+W  TT  YR + P
Sbjct: 36  NYVHSERPYKLAASLSFVILVFFIGMPMWHFTTSTYRSNFP 76


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 34.7 bits (76), Expect = 0.056
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 155  WPCLLIANYYEVYYNHCSLFFLQNEFKVYVINRKNTTFTVYQL 27
            WPCL + N+ +    +   FFL N  + + INRK      +QL
Sbjct: 1976 WPCLTMYNHQDPTMRYTGFFFLANIIERFTINRKIVLQVFHQL 2018


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 34.7 bits (76), Expect = 0.056
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 155  WPCLLIANYYEVYYNHCSLFFLQNEFKVYVINRKNTTFTVYQL 27
            WPCL + N+ +    +   FFL N  + + INRK      +QL
Sbjct: 1982 WPCLTMYNHQDPTMRYTGFFFLANIIERFTINRKIVLQVFHQL 2024


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 34.7 bits (76), Expect = 0.056
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 155  WPCLLIANYYEVYYNHCSLFFLQNEFKVYVINRKNTTFTVYQL 27
            WPCL + N+ +    +   FFL N  + + INRK      +QL
Sbjct: 1982 WPCLTMYNHQDPTMRYTGFFFLANIIERFTINRKIVLQVFHQL 2024


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 34.7 bits (76), Expect = 0.056
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 155  WPCLLIANYYEVYYNHCSLFFLQNEFKVYVINRKNTTFTVYQL 27
            WPCL + N+ +    +   FFL N  + + INRK      +QL
Sbjct: 1982 WPCLTMYNHQDPTMRYTGFFFLANIIERFTINRKIVLQVFHQL 2024


>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
            protein Y39B6A.18 protein.
          Length = 1352

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 26/94 (27%), Positives = 39/94 (41%)
 Frame = +3

Query: 279  EVYRVSLPYEKISSFKPLSHFVTTELKVLANDDATASKIVSEIQKAFAESDIIKIKIEKT 458
            E  RV    EK+   K        E KV    +    K+ +E ++  AE +  K+KIEK 
Sbjct: 887  EEERVKAEREKVK--KEEERLKAEEEKVKVEKERNKEKVKAEEERLKAEEE--KVKIEKE 942

Query: 459  VMSERQQHILRSVVDMEKAVEELASTLDLDQENI 560
             +   +Q I  +  +  K   E A  +   QE I
Sbjct: 943  KVKAEEQKIKSAEEERRKERAEDAKKVKEGQEKI 976


>Z69883-4|CAA93742.2|  480|Caenorhabditis elegans Hypothetical
           protein C27C12.5 protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = +3

Query: 423 ESDIIKIKIEKTVMSERQQHILRSVVDMEKAVEELASTLDLDQENI---FHVVQKKSLSH 593
           E  II  KIEKTV  E  +  L  V D     E   S +  +Q  +   FH        +
Sbjct: 412 EEIIITQKIEKTVQKETLEQPLEQVADTRPLAERRFSLMPNNQLGVKVQFHRPNHLLKRN 471

Query: 594 NIWVGN 611
           ++++GN
Sbjct: 472 SVYLGN 477


>Z81083-3|CAB03104.1|  559|Caenorhabditis elegans Hypothetical
           protein F44F1.4 protein.
          Length = 559

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/61 (26%), Positives = 34/61 (55%)
 Frame = +3

Query: 450 EKTVMSERQQHILRSVVDMEKAVEELASTLDLDQENIFHVVQKKSLSHNIWVGNERIMFX 629
           +K +  E QQ +L+ + ++EK  +E      L+ E++  ++++K     + VG +R+M  
Sbjct: 383 QKKLDEEEQQKVLK-IQELEKQKDEQIMKSMLELEDMKKLLEEKDEKILMHVGKQRVMKF 441

Query: 630 D 632
           D
Sbjct: 442 D 442


>U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical
           protein D1005.1 protein.
          Length = 1106

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
 Frame = +3

Query: 291 VSLPYE-KISSFKPLSHFVTTELKVLANDDATASKIVSEIQKAFAESDIIKIKIEKTVMS 467
           VS+P +   ++  P    +TT L  L + D    + V E+ KA+ +     ++I   V+ 
Sbjct: 151 VSVPVQLNENAMTPSDEELTTLLGPLKDSDIVR-RFVVELYKAYKDLHFTYLEINPFVLL 209

Query: 468 ERQQHILRSVVDMEKAVEELASTLDLDQ 551
             Q H+L    D+   ++E A+ L  D+
Sbjct: 210 NNQIHVL----DLAARLDETANFLCADK 233


>U29380-12|AAR12986.1|  485|Caenorhabditis elegans Hypothetical
           protein ZK546.2a protein.
          Length = 485

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = +3

Query: 279 EVYRVSLPYE-KISSFKPLSHFVTTELKVLANDDATASKIVSEIQKAFAESDIIKIKIEK 455
           E + V+ P E +IS  + +S   TT+L+ + ND +    I    +K   +S      + K
Sbjct: 196 EQFLVNAPREIRISFERNVSQMHTTDLQEMGNDSSKTKSIGDNARKIIGKSGPSTSTVNK 255

Query: 456 TVMSERQQHILR-SVVDMEKAVEELASTLDL 545
            +    +  IL+     ++K  +E+    D+
Sbjct: 256 HLEMASKSRILQLKGTGLKKVPDEIEPLADV 286


>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
            protein Y39B6A.30 protein.
          Length = 1408

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = +3

Query: 351  ELKVLANDDATASKIVSEIQKAFAESDIIKIKIEKTVMSERQQHILRSVVDMEKAVEELA 530
            E KV    +    K+ +E ++  AE +  K+KIEK  +   +Q I  +  +  K   E A
Sbjct: 948  EEKVKVEKERNKEKVKAEEERLKAEEE--KVKIEKEKVKAEEQKIKAAEEERRKERAEDA 1005

Query: 531  STLDLDQENI 560
              +   QE I
Sbjct: 1006 KKVKEGQEKI 1015


>AF038614-2|AAB92061.2|  321|Caenorhabditis elegans Serpentine
           receptor, class v protein4 protein.
          Length = 321

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 240 LIIIGMPLWWKTTEVYRVSLPYE-KISSFKPLSHFV 344
           L+ IG  LW+ TTE+  +S P+   +SS K    F+
Sbjct: 267 LVDIGTELWFFTTEIMCISSPWSLLVSSSKLRKEFI 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,496,749
Number of Sequences: 27780
Number of extensions: 297771
Number of successful extensions: 825
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)