Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5o10
(592 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0140 - 23073032-23073130,23073270-23073338,23073448-230735... 35 0.056
05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784 33 0.13
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 33 0.23
02_05_0464 - 29256887-29257765,29258455-29258538 30 1.6
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287... 30 1.6
08_02_0116 + 12762009-12763021,12763421-12763436 29 2.1
08_02_0083 + 12063349-12063406,12066151-12066480,12066529-120671... 29 2.1
07_03_0001 + 12219741-12219927,12219976-12220955 29 2.1
01_01_0070 - 542603-542686,542803-543441 29 2.1
05_05_0142 - 22673607-22674134 29 2.8
01_06_0640 + 30779457-30779623,30779707-30779828,30779959-307800... 29 2.8
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 29 2.8
12_01_0872 + 8326873-8327475,8328246-8328575 29 3.7
11_03_0010 - 8922361-8922375,8923888-8924610 29 3.7
07_01_0636 + 4761858-4762421,4763596-4763819,4763961-4764309,476... 29 3.7
04_04_0462 + 25393733-25394347 29 3.7
09_01_0013 - 355103-355435 28 4.8
07_03_0997 - 23203166-23203330,23203627-23203693,23203771-232038... 28 4.8
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57... 28 4.8
06_03_0332 + 19652207-19652995 28 4.8
02_05_0683 + 30877731-30878243 28 4.8
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 28 6.4
03_02_0981 + 12917195-12917572,12917661-12917818,12918732-129187... 27 8.5
02_02_0072 + 6558642-6559115,6560055-6561107 27 8.5
01_05_0164 + 18827390-18827710 27 8.5
01_03_0224 + 13940419-13941786 27 8.5
>04_04_0140 -
23073032-23073130,23073270-23073338,23073448-23073539,
23073637-23074550,23074646-23074779,23075003-23075058,
23077556-23077646
Length = 484
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 295 HRAALRSTNARTFGVRVASCGEGFVDPRRAVWWAARLHPI 176
HR+ L + V GEG +PRRA WW A H +
Sbjct: 35 HRSDLSMVTSSVLPKVVDDAGEGEANPRRAKWWYATFHSV 74
>05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784
Length = 394
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +1
Query: 439 PGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRP 561
P PA S A + AT SPR A +PPW T PP I P
Sbjct: 91 PMPTPAASSA-LAPATSSPRPASPPTPPWTTAPPPGIAAPP 130
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 493 PRLAPARSPPWGTTSPPRITRRPCPTD 573
P++ P SPP T SPP IT P P D
Sbjct: 616 PKITPYPSPPEVTPSPPEITPYPSPPD 642
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 493 PRLAPARSPPWGTTSPPRITRRPCPTD 573
P + P SPP T SPP IT P P +
Sbjct: 584 PEITPYPSPPEITPSPPEITPYPSPPE 610
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 493 PRLAPARSPPWGTTSPPRITRRPCPTD 573
P +AP SPP SPP IT P P +
Sbjct: 444 PEIAPYPSPPEIVPSPPEITPYPSPPE 470
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 493 PRLAPARSPPWGTTSPPRITRRPCPTD 573
P + P SPP SPP+IT P P +
Sbjct: 600 PEITPYPSPPEVVPSPPKITPYPSPPE 626
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 493 PRLAPARSPPWGTTSPPRITRRPCPTD 573
P + P SPP T PP IT P P +
Sbjct: 568 PEITPYPSPPEVTPGPPEITPYPSPPE 594
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 439 PGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCPTD 573
P +NP S I + P + P SPP SPP IT P P +
Sbjct: 492 PEINPYPSPPEIVPSP--PEITPYPSPPEIVPSPPEITPYPSPPE 534
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 493 PRLAPARSPPWGTTSPPRITRRPCPTD 573
P + P SPP SPP IT P P +
Sbjct: 460 PEITPYPSPPEIVPSPPEITPYPSPPE 486
>02_05_0464 - 29256887-29257765,29258455-29258538
Length = 320
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = -3
Query: 569 VGHGLLVIRGGDVVPQGGLLA---GASRGDHVALPIGA 465
+G G++ I GG V L A A GDH+ALP GA
Sbjct: 220 MGAGMMGIGGGGVAEYHALSALRFAAGLGDHLALPFGA 257
>01_06_1315 +
36226262-36226533,36227946-36228060,36228710-36228752,
36229953-36230329,36230330-36230481,36230591-36230838,
36230919-36231047,36231130-36231739,36231842-36232086,
36232195-36232325
Length = 773
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 415 PGQTRQTLPGLNPARSYAPIGRATWSPRLA---PARSPPWGTTSPPRITRRPC 564
P T + + L P A G W+ +A PA PP +SPP + PC
Sbjct: 170 PSATTKPVQKLRPGSRTAWAGHPKWALPVAYEMPAPPPPHAASSPPLPSSSPC 222
>08_02_0116 + 12762009-12763021,12763421-12763436
Length = 342
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 152 NALYKKHHLEKPRAIF 105
N L K+HH+EKPR +F
Sbjct: 293 NGLRKEHHMEKPRTVF 308
>08_02_0083 +
12063349-12063406,12066151-12066480,12066529-12067174,
12089873-12089933
Length = 364
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 152 NALYKKHHLEKPRAIF 105
N L K+HH+EKPR +F
Sbjct: 300 NGLRKEHHMEKPRTVF 315
>07_03_0001 + 12219741-12219927,12219976-12220955
Length = 388
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 152 NALYKKHHLEKPRAIF 105
N L K+HH+EKPR +F
Sbjct: 232 NGLRKEHHMEKPRTVF 247
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 433 TLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRPCP 567
T P +P P AT +P +APA++PP P P P
Sbjct: 43 TAPAKSPPAPATPAPTATPTPPVAPAKAPPVAPAVAPVTPPPPTP 87
>05_05_0142 - 22673607-22674134
Length = 175
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 214 EGRRSLPHSWPLLLQRSARSWSAALLCAS 300
+GRR P SW + RS R WS L AS
Sbjct: 39 DGRRCRPVSWIPVSGRSGRRWSTVQLSAS 67
>01_06_0640 +
30779457-30779623,30779707-30779828,30779959-30780014,
30780147-30780254
Length = 150
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +1
Query: 418 GQTRQTLPGLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRITRR 558
G R+ L GL A S + +P A ARSP S PR TRR
Sbjct: 6 GGARRALAGLRSASSSRAFSQP--APAAAAARSPELAAFSLPRSTRR 50
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = -3
Query: 296 AQSSAALHERADLWSKSGQLWGRLRRPSQSSLVGSAAASNRHLSTS 159
A SSA + A L K+ Q+ L RPS + + +AAA++ H S+S
Sbjct: 332 AASSAHMSATA-LLQKAAQMGATLSRPSSHAHMAAAAAASTHNSSS 376
>12_01_0872 + 8326873-8327475,8328246-8328575
Length = 310
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 307 CSGWHRAALRSTNARTFGVRVASCGEGFVDPRRAVWWAARLHPIAT*AHLFVTLF 143
CS W S N +T + SC GF+D + W L+PI F++ F
Sbjct: 239 CSRW------SNNQQTLCFQCDSCKAGFLDDIKKAWSFDALYPILALVGAFLSCF 287
>11_03_0010 - 8922361-8922375,8923888-8924610
Length = 245
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -3
Query: 518 GLLAG--ASRGDHVALPIGAY-ERAGFNPGNVC 429
G AG A D A IGAY AG+NPG +C
Sbjct: 61 GAAAGMAADAADSAAANIGAYIPEAGYNPGKLC 93
>07_01_0636 +
4761858-4762421,4763596-4763819,4763961-4764309,
4764648-4765331
Length = 606
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 442 GLNPARSYAPIGRATWSPRLAPARSPPWG 528
G++P+R A +P LAPA +P WG
Sbjct: 163 GVSPSRVAVTAAAAEPTPALAPAPAPEWG 191
>04_04_0462 + 25393733-25394347
Length = 204
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 530 VPQGGLLAGASRGDHVALPIGAYERAGFNPGNVCRVC 420
VP GG G G H + +Y A G+V RVC
Sbjct: 96 VPPGGKAGGVCLGGHSVAAVVSYGGAFLGEGSVGRVC 132
>09_01_0013 - 355103-355435
Length = 110
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 454 ARSYAPIGRATWSPRLAPARSPPW 525
AR A GR W PR P R P W
Sbjct: 28 ARGGAAGGRRAWRPRWRPQRRPRW 51
>07_03_0997 -
23203166-23203330,23203627-23203693,23203771-23203862,
23204820-23204956,23205050-23205116,23205212-23205278,
23205356-23205441,23206061-23206153,23206337-23206522,
23207316-23207372,23207455-23207582,23207662-23207731,
23207815-23207950,23208378-23208529,23208606-23208680,
23208765-23208929,23209063-23209128,23209229-23209333,
23209929-23210132,23210462-23211715
Length = 1123
Score = 28.3 bits (60), Expect = 4.8
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -3
Query: 305 LRLAQSSAALHERADLWSKSGQLWGRLRRPSQSSLVGSAAASN--RHLSTSLRNALYKKH 132
LRLA S ++ ADL + + L +L P+ SS SAAA+ HLS + + AL K
Sbjct: 56 LRLASSLSSPATPADLRAMAAVLLRKLLSPTPSSDASSAAAAPVWPHLSPAGQAAL--KQ 113
Query: 131 HL 126
HL
Sbjct: 114 HL 115
>07_01_0077 +
566895-567127,567207-567331,571204-571340,571437-571542,
571635-571885,572018-572128,572209-572320,572626-572716,
573168-573507,573678-573900,573946-574204,574274-574481,
574572-574622,574712-574870,574956-575120,575322-575399,
575732-576031,576107-576259,576871-576918,577019-577188,
577738-577852,578462-578623,578789-578893,578969-579199,
579277-579410,579484-579738,579822-580110,580214-580306,
580395-580520,580646-580897
Length = 1693
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 449 IPHVHMLRSGERRGPLGSRRPEVRPGELH 535
IPH L + + P+ S++P+VR E+H
Sbjct: 158 IPHSEHLNNDLTQDPVASKKPKVRKKEIH 186
>06_03_0332 + 19652207-19652995
Length = 262
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 466 APIGRATWSPRLAPARSPPWGTTSPPRITRRPCP 567
A I A SP ++P+ + PW R++R P P
Sbjct: 215 AAIDAAARSPAMSPSPTRPWTPERVARVSRSPSP 248
>02_05_0683 + 30877731-30878243
Length = 170
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 542 GGDVVPQGGLLAG-ASRGDHVALPIGAYERAGFNPGNVC 429
GG GG A A+RG VA+P+ A A + GN C
Sbjct: 126 GGSGASDGGSTAAMAARGSTVAVPVAAAAVARGSRGNTC 164
>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
Length = 696
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 502 APARSPPWGTTSPPRITRRPCPTDS 576
APA +PP +P R+ RRP T S
Sbjct: 13 APAAAPPSAVRTPRRLRRRPLKTAS 37
>03_02_0981 +
12917195-12917572,12917661-12917818,12918732-12918765,
12918942-12919074,12919167-12919221,12919281-12920064,
12920440-12920769,12920788-12920895,12921259-12921678,
12921775-12921847,12922291-12922376,12922873-12922992,
12923086-12923156,12923350-12923449
Length = 949
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Frame = +1
Query: 145 RALRRDVLKWRLDAAALPTKLLCE------GRRSLPHSWPLLLQRSARSWSAA 285
R R D +WR A ++P K +CE +R+ + L+RS+ S SAA
Sbjct: 15 RCKRSDGKQWRCSAPSMPDKTVCEKHYVQAKKRAASSALRASLRRSSASASAA 67
>02_02_0072 + 6558642-6559115,6560055-6561107
Length = 508
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -3
Query: 302 RLAQSSAALHERAD-LWSKSGQLWGRLRRPSQSSLVG-SAAASNRHL 168
RL L+ AD L+S SG+ W RLR+ + ++G S RH+
Sbjct: 108 RLLAGEVVLYGGADILFSPSGEYWRRLRQLCAAEVLGPKRVLSFRHI 154
>01_05_0164 + 18827390-18827710
Length = 106
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +1
Query: 478 RATWSPRLAP--ARSPPWGTTSP 540
R TW P LAP +R PP TT P
Sbjct: 46 RTTWRPDLAPTTSRRPPATTTDP 68
>01_03_0224 + 13940419-13941786
Length = 455
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 466 APIGRATWSPRLAPARSPP 522
AP ATWS L ARSPP
Sbjct: 200 APAVHATWSRELLDARSPP 218
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,203,387
Number of Sequences: 37544
Number of extensions: 373917
Number of successful extensions: 1660
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1655
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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