Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5o08
(541 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 57 8e-09
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 46 1e-05
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 44 1e-04
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301... 39 0.002
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 35 0.036
05_03_0227 + 10655204-10655269,10656333-10656393,10656570-106566... 34 0.083
09_02_0430 - 9313768-9314259,9314347-9315299,9316875-9317022 32 0.25
01_01_1157 - 9203448-9203560,9204725-9204768,9205345-9205433,920... 32 0.25
04_04_0718 + 27536657-27537688 32 0.34
11_06_0309 + 22265906-22266929,22267451-22267629,22267966-222681... 31 0.44
08_01_0413 - 3679887-3681254 31 0.78
06_01_1126 - 9277885-9277935,9278129-9278209,9278297-9278350,927... 30 1.4
06_01_1113 - 9164953-9165044,9166453-9166586,9166624-9166734,916... 30 1.4
01_03_0126 + 12741397-12743022 30 1.4
04_03_0972 + 21347212-21347284,21347966-21348009,21348153-213482... 29 1.8
09_04_0545 - 18457169-18457399,18457733-18457915,18458012-184582... 29 2.4
02_05_0219 + 26870970-26873117 28 4.1
11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931 28 5.5
06_03_1412 + 29993566-29993873,29993960-29994583,29994665-299948... 28 5.5
11_01_0207 - 1620192-1620280,1620408-1620451,1620703-1620791,162... 27 7.2
07_01_0235 - 1719447-1721491,1721986-1722097 27 7.2
03_02_0326 + 7474352-7474448,7474913-7474977,7475105-7475191,747... 27 7.2
01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159 27 7.2
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 27 9.6
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 27 9.6
09_06_0278 + 21991016-21992120,21992341-21992702,21992766-219934... 27 9.6
01_06_0922 - 33022709-33023545 27 9.6
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 57.2 bits (132), Expect = 8e-09
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +3
Query: 150 DEAVELAGHGRYNYTLLGVCSIIVVAVAIDMFGYSVVVAASSCDLGVGLKETGLLASAPF 329
DEA+E G G++ +L + V ++++ S V + + + LL+S F
Sbjct: 202 DEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESLLSSVVF 261
Query: 330 AGLLF-AFPWGFYADTRGRRKALLISTSFGFLFAALSSLSMNWQFMFASK-LFGCGFSTA 503
AG+L A WGF +D GRR LL ST F LS+ S N+ + A + L G G A
Sbjct: 262 AGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPNYSCLLALRFLVGIGVGGA 321
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +3
Query: 150 DEAVELAGHGRYNYTLLGVCSIIVVAVAIDMFGYSVVVAASSCDLGVGLKETGLLASAPF 329
DEA+ G G++ +L + ++ A++M S V + + + + L+ S F
Sbjct: 35 DEALISMGFGKFQAFVLAYSGMAKISEAMEMMLLSFVGQSVQAEWELSAQAESLITSVVF 94
Query: 330 AGLLF-AFPWGFYADTRGRRKALLISTSFGFLFAALSSL 443
G+L A+ WG +D GRR+A++ S + +L A SSL
Sbjct: 95 VGMLVGAYSWGIVSDNYGRRQAVMPSLGWRWLL-AFSSL 132
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 150 DEAVELAGHGRYNYTLLGVCSIIVVAVAIDMFGYSVVVAASSCDLGVGLKETGLLASAPF 329
D+A+ +G GRY +L + ++A A++M S V + + + + ++ S F
Sbjct: 13 DDALLSSGFGRYQILILSYAGVGLIAEAMEMMLLSFVGPSVQLEWKLTSHQESMITSIVF 72
Query: 330 AGLLF-AFPWGFYADTRGRRK 389
G+L A+ WG +D GRR+
Sbjct: 73 VGMLIGAYTWGVVSDNYGRRQ 93
>07_03_0968 -
23027940-23028149,23028800-23029002,23029610-23030138,
23030342-23030579,23031121-23031168,23031199-23031494
Length = 507
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 150 DEAVELAGHGRYNYTLLGVCSIIVVAVAIDMFGYSVVVAASSCDLGVGLKETGLLASAPF 329
D+A+ AG GR+ +L + VA A+++ S V + + GV GL++S F
Sbjct: 20 DDALTRAGFGRFQALVLAYACVGWVAEAMEVMLLSFVGPSVKAEWGVSGAAEGLVSSVVF 79
Query: 330 AGLLF-AFPWGFYADTRGRRKALLIST 407
AG+L A G +D GR + LI+T
Sbjct: 80 AGMLIGACLGGLISDRYGR--SFLIAT 104
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 35.1 bits (77), Expect = 0.036
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +3
Query: 306 GLLASAPFAG-LLFAFPWGFYADTRGRRKALLISTSFGFLFAALSSLSMN-WQFMFASKL 479
G + + F G + A PWG +AD GR+ ++IS +F L LS W + L
Sbjct: 87 GFVGATYFLGRTISAVPWGIFADKYGRKPCIVISILSVIVFNTLFGLSTTYWMAIVTRGL 146
Query: 480 FG--CG 491
G CG
Sbjct: 147 LGLLCG 152
>05_03_0227 +
10655204-10655269,10656333-10656393,10656570-10656672,
10656768-10656870,10656951-10657004,10657124-10657186,
10657884-10658105,10658249-10658336,10658561-10658646,
10659003-10659110,10659201-10659245,10659511-10659601,
10659662-10659765
Length = 397
Score = 33.9 bits (74), Expect = 0.083
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +3
Query: 306 GLLASAPFAGLLFA-FPWGFYADTRGRRKALLISTSFGFLFAALSSLSMN-WQFMFASKL 479
G +A++ F F+ PWG +AD GR+ ++IS F L LS W + +
Sbjct: 40 GFVAASYFLARTFSSVPWGIFADKYGRKPCIVISILSVIFFNTLFGLSTRYWMAIVTRGM 99
Query: 480 FG--CG 491
G CG
Sbjct: 100 LGMLCG 105
>09_02_0430 - 9313768-9314259,9314347-9315299,9316875-9317022
Length = 530
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 315 ASAPFAGLLFAFPWGFYADTRGRRKALLISTSFGFLFAALSSLSMNWQFMFASKLF---G 485
+S FAGL+ F RGRR +++ FL A+++ + N + A +L G
Sbjct: 92 SSLYFAGLVSTFAASHLTRRRGRRATIMVGAVSFFLGGAVNAAAANVAMLIAGRLLLGVG 151
Query: 486 CGFSTASFTLVIT 524
GF + L ++
Sbjct: 152 IGFGNQAVPLYLS 164
>01_01_1157 -
9203448-9203560,9204725-9204768,9205345-9205433,
9205565-9205609,9205805-9205912,9206003-9206088,
9206492-9206579,9206725-9206910,9207181-9207256,
9207332-9207381,9207715-9207777,9207882-9207962,
9208028-9208130,9208246-9208348,9208489-9208549,
9209059-9209154,9209185-9209225,9209848-9209922,
9210412-9210562
Length = 552
Score = 32.3 bits (70), Expect = 0.25
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 11/102 (10%)
Frame = +3
Query: 219 VVAVAIDM-FGYSVVVAASSCDLGVGLKETGLLASAPFAGLLFAFP-------WGFYADT 374
V +V ID FG + + DL + +E + A F G + F WG AD
Sbjct: 103 VTSVTIDFTFGLNSCAGSVIRDLHIAKQEEDIGFYAGFVGASYMFGRALSSVIWGIVADK 162
Query: 375 RGRRKALLISTSFGFLFAALSSLSMN-WQFMFASKLFG--CG 491
GR+ ++I+ +F L LS + W + + L G CG
Sbjct: 163 YGRKPIIIITLISIIIFNTLFGLSSSYWMALTSRGLLGLMCG 204
>04_04_0718 + 27536657-27537688
Length = 343
Score = 31.9 bits (69), Expect = 0.34
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 340 SNPAKGADASKPVSLSPTPRSQLE-AATTTLYPNMSMATATTII 212
S+PA G + +KP++ SP PR L A T+ P S A A +
Sbjct: 20 SSPAPGPNHAKPIAASPAPRRCLRLAVTSAAAPAASSAEAAAAL 63
>11_06_0309 +
22265906-22266929,22267451-22267629,22267966-22268179,
22268273-22268510,22268617-22268767,22268934-22269158
Length = 676
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 281 SRCRAQGDRFACIGAFCWIAFCFSLGLLRGYKR 379
S+ A F +G+FC + FCF GL+R YK+
Sbjct: 311 SKVMAMATIFPLLGSFCCVIFCF--GLVRRYKK 341
>08_01_0413 - 3679887-3681254
Length = 455
Score = 30.7 bits (66), Expect = 0.78
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = -1
Query: 292 PTPRSQLEAATTTLYPNMSMATATTIILHTPNSV*LYRPCPANSTASS*PHESVTLPEQP 113
P P +L+ A YP++ + +A T+ SV + P PA + S P +++ PEQ
Sbjct: 32 PPPPGRLDVAAD--YPSLLLNSAATVANEQRGSVVVAAPPPAAAAYS--PSNALSAPEQV 87
Query: 112 SVTTTSLFIVE 80
V + ++V+
Sbjct: 88 LVDPVAAWLVD 98
>06_01_1126 -
9277885-9277935,9278129-9278209,9278297-9278350,
9278433-9278564,9278641-9278715,9279056-9279133,
9279215-9279327,9279421-9279535,9280565-9280754,
9281355-9281464,9281559-9281654,9281756-9281818,
9281911-9281988,9282452-9282564,9282664-9282721,
9282797-9282920,9282999-9283060,9283131-9283195,
9283264-9283324,9284242-9284307,9284472-9284531,
9284830-9284960,9285517-9285592,9285701-9285769,
9286065-9286112,9286552-9286671,9286918-9287034,
9287290-9287405,9288348-9288519,9289057-9289100,
9290359-9290712,9291680-9291806
Length = 1072
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -1
Query: 187 LYRPCPANSTASS*PHESVTLPEQPS--VTTTSLFIVENHKKKTLTIVK 47
L +PCP N+ +S P S + +Q S + +++F++EN + + I++
Sbjct: 131 LQQPCPINTAPASMPSMSPSSNQQQSGDIIPSTIFMLENFSCQKIVIIR 179
>06_01_1113 -
9164953-9165044,9166453-9166586,9166624-9166734,
9166815-9167066,9167152-9168186,9168313-9169187,
9169476-9169673
Length = 898
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +2
Query: 104 CN*WLLW*SYRLM--WLRRSGGISWAW 178
C WL RLM WLRR G+ W W
Sbjct: 863 CQDWLAGRQNRLMMSWLRRREGVGWQW 889
>01_03_0126 + 12741397-12743022
Length = 541
Score = 29.9 bits (64), Expect = 1.4
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +3
Query: 282 LGVGLKETGLLASAPFAG-LLFAFPWGFYADTR-GRRKALLISTSFGFLFAALSSLSMNW 455
L G L AS+ FAG L F ADT GRRK LL+S + AAL++ S N
Sbjct: 118 LNCGPALVSLPASSFFAGNLAGGFLLATLADTHLGRRKMLLLSLVTMSVAAALTAFSPN- 176
Query: 456 QFMFASKLFGCGF 494
+++++ F GF
Sbjct: 177 VWVYSALRFVSGF 189
>04_03_0972 +
21347212-21347284,21347966-21348009,21348153-21348237,
21348810-21349358,21350291-21350416,21350772-21350936,
21351243-21351310,21351529-21351618,21351740-21351830,
21352214-21352812
Length = 629
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/44 (47%), Positives = 24/44 (54%)
Frame = -2
Query: 504 LPWKNRIQIA*RQT*TANSLTDYLKPQTGSRTTWRSVKPSFVLL 373
LPWKNRIQIA AN+L +YL +KPS VLL
Sbjct: 354 LPWKNRIQIA---IDVANAL-EYLHFYCDPPLCHGDIKPSNVLL 393
>09_04_0545 -
18457169-18457399,18457733-18457915,18458012-18458227,
18459050-18459610
Length = 396
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 372 YPRRSPREKQKAIQQKAPMQANRSP*ALHR 283
YP +S RE KA Q +AP Q A HR
Sbjct: 285 YPGQSAREPNKAAQARAPAQNQNGTVASHR 314
>02_05_0219 + 26870970-26873117
Length = 715
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = -1
Query: 490 PHPNSLEANINCQFIDRLLKAANRKPNDVEISKAFLRPLVSA*KPQGKAKSNPAKGADAS 311
PHP+ E N + K + P+D+ +++ L P +A A+ P AS
Sbjct: 274 PHPSFPEHNHQSPLLQPPPKRHHSMPDDIYLARNQLPPAAAA------AQGLPFSPLHAS 327
Query: 310 KPVSLSPTPRSQLEAATTT 254
P L P+P A TT
Sbjct: 328 VPFQLQPSPPPIRGAMKTT 346
>11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931
Length = 478
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +3
Query: 279 DLGVGLKETGLLASAPFAGLLFAF-PWGFYADTRGRRKALLISTSFGFLFAALSSLSMNW 455
D+G+ E +LA + +L + G+ ADT GRR ++++ +F A SL +
Sbjct: 61 DMGLSDAEIEVLAGSMNVFMLASILAAGWAADTLGRRGTIVLANAFLMAGALAMSLGATY 120
Query: 456 QFMFASKL---FGCGFS 497
+ A++ G GF+
Sbjct: 121 AALMAARFVTSVGVGFA 137
>06_03_1412 +
29993566-29993873,29993960-29994583,29994665-29994800,
29995108-29995196,29995299-29995413,29995565-29995628,
29995711-29995782,29995906-29996153
Length = 551
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +2
Query: 143 WLRRSGGISWAWPVQLHTVGSV*YYRCCGGHRH-VWVQRG 259
W G +WP +GS YY H H ++ +RG
Sbjct: 42 WAEERGHAGVSWPAGAEVIGSPEYYSALSRHDHALFARRG 81
>11_01_0207 -
1620192-1620280,1620408-1620451,1620703-1620791,
1620870-1620914,1621441-1621548,1621638-1621723,
1622202-1622289,1622403-1622576,1623084-1623159,
1623256-1623305,1623392-1623454,1623689-1623791,
1623871-1623973,1624679-1624739,1624864-1624904,
1625076-1625154
Length = 432
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 261 VAASSCDLGVGLKETGLLASAPFAGLLFA-FPWGFYADTRGRRKALLISTSFGFLFAALS 437
VA D+G+ G L ++ G FA WG AD GR+ + S +F L
Sbjct: 46 VAKKEQDIGL---YAGFLGASYMIGRCFASLFWGVVADRIGRKPIIKFSILSVVIFNTLF 102
Query: 438 SLSMNWQFMFASK 476
LS+ + A++
Sbjct: 103 GLSVKYWMAIATR 115
>07_01_0235 - 1719447-1721491,1721986-1722097
Length = 718
Score = 27.5 bits (58), Expect = 7.2
Identities = 26/96 (27%), Positives = 42/96 (43%)
Frame = +3
Query: 15 FLEQCVNILNSFTIVNVFFL*FSTMNKEVVVTDGCSGKVTDSCGYDEAVELAGHGRYNYT 194
F E L+SF++ VF + S + V TDG + + S + +A G +NY
Sbjct: 125 FRESPGTTLHSFSVSIVFGI-ISAYRE--VGTDGMAFLIAPSSNFSDANAAQHLGLFNYK 181
Query: 195 LLGVCSIIVVAVAIDMFGYSVVVAASSCDLGVGLKE 302
G S V AV ID + + S +G+ + +
Sbjct: 182 NNGNMSNHVFAVEIDTVRNNEFMDIDSNHIGIDISD 217
>03_02_0326 +
7474352-7474448,7474913-7474977,7475105-7475191,
7475393-7475440,7476086-7476142,7476588-7476687,
7476875-7477185,7477298-7477667,7478745-7478876,
7479362-7479575,7479650-7479710,7480098-7480292
Length = 578
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 114 GCSGKVTDSCGYDEAVEL-AGHGRYNYTLLGVCSIIVVAVAIDMF 245
GCS + +CG DE + L G++ + S + VAV +D F
Sbjct: 341 GCSSVIPTACGRDETLTLFHALGKFLHNKRETYSEVDVAVDVDSF 385
>01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159
Length = 400
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = -1
Query: 352 GKAKSNPAKGADASKPVSLSPTPRSQLEAATTTLYPNMSMATATTIILHTPNSV*LYRPC 173
G+ P++G+ A S SPTP S L A T P + + +TP +P
Sbjct: 150 GRLFRTPSQGSLAMSSPSPSPTPPSPLTPAPATTAPAPTPTAKSKSGQNTPKHKEALKP- 208
Query: 172 PANSTASS 149
PA A++
Sbjct: 209 PATPVATA 216
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 27.1 bits (57), Expect = 9.6
Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = -1
Query: 397 SKAFLRPLVSA*KPQGKAKSNPAKGADASKPVSLSPTPRSQLE--AATTTLYPNMSMATA 224
S+A P +A QG P G S P + R AAT+ + ATA
Sbjct: 57 SRAASPPPPTAAGGQGGVGGGPVSGGGGSAPGGAATAQREGAPPAAATSVQGAPRAPATA 116
Query: 223 TTIILHTPNSV*LYRPCPANSTASS*PHESVT 128
T+ +P + P STA S P S T
Sbjct: 117 ETVPQGSPRGPGVRTVGPVPSTAQSAPGGSAT 148
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 369 DTRGRRKALLISTSFGFLFAALSSLSMNWQFMFASKLFGCG 491
D GRR LLISTS + + +S++S + AS G G
Sbjct: 275 DRSGRRPLLLISTSGLLIGSLMSAVSFYLKVYIASYSIGMG 315
>09_06_0278 +
21991016-21992120,21992341-21992702,21992766-21993459,
21994064-21994191
Length = 762
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 507 NLPWKNRIQIA*RQT*TANSLTDYLKPQTGSRTTWRSVKPSFVLL 373
+LPW++R++IA T TA SLT YL R +K +LL
Sbjct: 516 SLPWEDRLRIA---TETARSLT-YLHSAVSFPIIHRDIKSHNILL 556
>01_06_0922 - 33022709-33023545
Length = 278
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -1
Query: 358 PQGKAKSNPAKGADASKPVSLSPTPRSQLEAATTTLYP 245
P+ + ++PA PV + P+PR EA + L P
Sbjct: 191 PEQRRAASPAPSLQRKPPVPVRPSPRRVQEAPPSPLEP 228
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,518,697
Number of Sequences: 37544
Number of extensions: 351288
Number of successful extensions: 994
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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