Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5o08
(541 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 59 2e-09
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical pr... 34 0.075
AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical ... 34 0.075
AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical ... 31 0.70
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 30 0.93
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 30 1.2
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 30 1.2
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 29 1.6
U55854-1|AAA98010.2| 418|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 2.8
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 2.8
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 2.8
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 2.8
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.8
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 2.8
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 2.8
U41993-5|AAA83447.2| 451|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 28 4.9
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 28 4.9
Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical pr... 27 6.5
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 27 6.5
U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 27 8.6
AF099919-13|AAC68798.1| 636|Caenorhabditis elegans Hypothetical... 27 8.6
AF025452-2|AAB70943.1| 585|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 58.8 bits (136), Expect = 2e-09
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Frame = +3
Query: 150 DEAVELAGHGRYNYTLLGVCSIIVVAVAIDMFGYSVVVAASSCDLGVGLKETGLLASAPF 329
DEAVE G GR+ L + + +A A++M S++ A +C+ G+ + L+ + F
Sbjct: 70 DEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQALVTTCVF 129
Query: 330 AGLLFAFP-WGFYADTRGRRKALLISTSFGFLFAALSSLSMN-WQFMFASKL--FGCGFS 497
+G++ + WG D GRRK L ST + +S +S + + +F L FG G
Sbjct: 130 SGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLTGFGIGGV 189
Query: 498 TASFTLVITLL 530
S TL L
Sbjct: 190 PQSVTLYAEFL 200
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 58.8 bits (136), Expect = 2e-09
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Frame = +3
Query: 150 DEAVELAGHGRYNYTLLGVCSIIVVAVAIDMFGYSVVVAASSCDLGVGLKETGLLASAPF 329
DEAVE G GR+ L + + +A A++M S++ A +C+ G+ + L+ + F
Sbjct: 70 DEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQALVTTCVF 129
Query: 330 AGLLFAFP-WGFYADTRGRRKALLISTSFGFLFAALSSLSMN-WQFMFASKL--FGCGFS 497
+G++ + WG D GRRK L ST + +S +S + + +F L FG G
Sbjct: 130 SGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLTGFGIGGV 189
Query: 498 TASFTLVITLL 530
S TL L
Sbjct: 190 PQSVTLYAEFL 200
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 40.7 bits (91), Expect = 7e-04
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 285 GVGLKETGLLASAPFAGLLF-AFPWGFYADTRGRRKALLISTSFGFLFAALSSLSMNWQF 461
G ++ +A+ F G L A +G D GR+ + S G +F S + +W+
Sbjct: 90 GTKAYDSAWIATIQFIGALVGALVYGHLGDHFGRKPVSFVGISIGIIFGVASGFAPSWE- 148
Query: 462 MFASKLFGCGFSTASFTLV 518
+FA LF CG S A +V
Sbjct: 149 VFAVLLFICGTSVACIMIV 167
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 36.7 bits (81), Expect = 0.011
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +3
Query: 285 GVGLKETGLLASAPFAGLLF-AFPWGFYADTRGRRKALLISTSFGFLFAALSSLSMNWQF 461
G + +A+ F G+L A +G D GR+ S G LF S + +W+
Sbjct: 90 GTKAYDAAWVATIQFIGVLIGAITYGHLGDHFGRKPVSFFGISVGILFGVASGFAPSWE- 148
Query: 462 MFASKLFGCGFSTASFTLV 518
+FA+ F G S AS +V
Sbjct: 149 VFAAFRFIVGTSIASILIV 167
>Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 33.9 bits (74), Expect = 0.075
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 309 LLASAPFAGLLFA-FPWGFYADTRGRRKALLISTSFGFLFAALSSLSMNWQFMFASKLFG 485
L + FAG+L F +G +D GR+ + + S G L ++ L+ N+Q + + F
Sbjct: 86 LFSQIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRFF- 144
Query: 486 CGFSTASFTLVI 521
G S TLV+
Sbjct: 145 LGLSVGG-TLVV 155
>AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 33.9 bits (74), Expect = 0.075
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 309 LLASAPFAGLLFA-FPWGFYADTRGRRKALLISTSFGFLFAALSSLSMNWQFMFASKLFG 485
L + FAG+L F +G +D GR+ + + S G L ++ L+ N+Q + + F
Sbjct: 86 LFSQIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRFF- 144
Query: 486 CGFSTASFTLVI 521
G S TLV+
Sbjct: 145 LGLSVGG-TLVV 155
>AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical
protein B0348.5 protein.
Length = 254
Score = 30.7 bits (66), Expect = 0.70
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 291 GLKETGLLASAPFAGLLFAFPWGFYADTRGRRKALLI 401
GL+E + +APF+GL+ G+Y T G R+ ++
Sbjct: 40 GLEEYNIRPAAPFSGLVGGSRSGYYGSTVGMRRGAVV 76
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 30.3 bits (65), Expect = 0.93
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
Frame = -1
Query: 361 KPQGKAKSNPAKGADASKPVSLS--PTPRSQLEAATTTLYPNMSMATATTIILHTPNSV* 188
KP + P AD + ++ S P P S +TT S T+TT+ + SV
Sbjct: 173 KPTTTSTITPTTSADPTSTITTSTTPNPSSPSTVQSTTTAEPTSTITSTTVPESSTTSVV 232
Query: 187 LYRPC--PANS-TASS*PHESVTLPEQPSVTTTSLFIVENHKKKTLTIVKLFNILTHCSK 17
P ++ T+++ P S +L +TT+L TLT + I + S
Sbjct: 233 QSTTTAEPTSTITSTTVPESSTSLLTSTLASTTTLIPTSTMSTITLTSDRTSTITSTGSS 292
Query: 16 NIRAT 2
N +T
Sbjct: 293 NPPST 297
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -1
Query: 322 ADASKPVSLSPTPRSQLEAATTTLYPNMSMATATTIILHTPNSV*LYRPCPANSTASS*P 143
A+ + ++ + P S T+TL ++ +T+ T S R ST SS P
Sbjct: 238 AEPTSTITSTTVPESSTSLLTSTLASTTTLIPTSTMSTITLTSD---RTSTITSTGSSNP 294
Query: 142 HESVTLPEQPSVTTT 98
+ T+P + TTT
Sbjct: 295 PSTSTVPSTTTSTTT 309
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 29.9 bits (64), Expect = 1.2
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +3
Query: 276 CDLGVGLKETGLLASAPFAGLLFAFPWGFYADTRGRRKALLISTSFGFLFAALSSLSMN- 452
CD +K T + F L+ A +G +D GRRKAL+IS +F +SS S +
Sbjct: 119 CDDAKKVKNT--ITIQTFGVLVGAAIFGQVSDNFGRRKALIISCIGNAIFNLISSYSPSL 176
Query: 453 WQFMF---ASKLFGCGFSTASFTLVI 521
+ FM S +F G + ++
Sbjct: 177 FYFMLWRTVSGIFAGGLTVVQMVYMV 202
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 29.9 bits (64), Expect = 1.2
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +3
Query: 276 CDLGVGLKETGLLASAPFAGLLFAFPWGFYADTRGRRKALLISTSFGFLFAALSSLSMN- 452
CD +K T + F L+ A +G +D GRRKAL+IS +F +SS S +
Sbjct: 119 CDDAKKVKNT--ITIQTFGVLVGAAIFGQVSDNFGRRKALIISCIGNAIFNLISSYSPSL 176
Query: 453 WQFMF---ASKLFGCGFSTASFTLVI 521
+ FM S +F G + ++
Sbjct: 177 FYFMLWRTVSGIFAGGLTVVQMVYMV 202
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +3
Query: 312 LASAPFAGLLFA-FPWGFYADTRGRRKALLISTSFGFLFAALSSLSMN-WQFMFASKLFG 485
L++A F G L GF AD GRR L S FG LS+ N + F L G
Sbjct: 118 LSTATFIGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILIG 177
Query: 486 CGFS 497
S
Sbjct: 178 ISVS 181
>U55854-1|AAA98010.2| 418|Caenorhabditis elegans Hypothetical
protein C04G6.4 protein.
Length = 418
Score = 29.1 bits (62), Expect = 2.1
Identities = 26/82 (31%), Positives = 35/82 (42%)
Frame = -1
Query: 505 LAVEKPHPNSLEANINCQFIDRLLKAANRKPNDVEISKAFLRPLVSA*KPQGKAKSNPAK 326
L+ E P P L+ NI LL+ N DV+ A +P V+ P NP
Sbjct: 21 LSFEMPKPPVLQPNIAS-----LLQKTNTTGEDVKSKDA--QPSVT---PVPPPTFNPVP 70
Query: 325 GADASKPVSLSPTPRSQLEAAT 260
A +P S+SP P + A T
Sbjct: 71 NPFAPRPKSVSPNPHPDVPAVT 92
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.7 bits (61), Expect = 2.8
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -1
Query: 331 AKGADASKPVSLSPTPRSQLEAATTTLYPNMSM-ATATTIILHTPNSV*LYRPCPANSTA 155
A AD + S + T S AA+TT + A+ATT T +S + +TA
Sbjct: 146 ATTADTTTTESETTTEASATTAASTTKDSETTTEASATTAASTTKDSETTTEA--SATTA 203
Query: 154 SS*PHESVTLPEQPSVTTT 98
++ ES+T E SVTTT
Sbjct: 204 ATTTQESITTTESDSVTTT 222
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.7 bits (61), Expect = 2.8
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -1
Query: 331 AKGADASKPVSLSPTPRSQLEAATTTLYPNMSM-ATATTIILHTPNSV*LYRPCPANSTA 155
A AD + S + T S AA+TT + A+ATT T +S + +TA
Sbjct: 146 ATTADTTTTESETTTEASATTAASTTKDSETTTEASATTAASTTKDSETTTEA--SATTA 203
Query: 154 SS*PHESVTLPEQPSVTTT 98
++ ES+T E SVTTT
Sbjct: 204 ATTTQESITTTESDSVTTT 222
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.7 bits (61), Expect = 2.8
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -1
Query: 331 AKGADASKPVSLSPTPRSQLEAATTTLYPNMSM-ATATTIILHTPNSV*LYRPCPANSTA 155
A AD + S + T S AA+TT + A+ATT T +S + +TA
Sbjct: 146 ATTADTTTTESETTTEASATTAASTTKDSETTTEASATTAASTTKDSETTTEA--SATTA 203
Query: 154 SS*PHESVTLPEQPSVTTT 98
++ ES+T E SVTTT
Sbjct: 204 ATTTQESITTTESDSVTTT 222
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.7 bits (61), Expect = 2.8
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -1
Query: 331 AKGADASKPVSLSPTPRSQLEAATTTLYPNMSM-ATATTIILHTPNSV*LYRPCPANSTA 155
A AD + S + T S AA+TT + A+ATT T +S + +TA
Sbjct: 146 ATTADTTTTESETTTEASATTAASTTKDSETTTEASATTAASTTKDSETTTEA--SATTA 203
Query: 154 SS*PHESVTLPEQPSVTTT 98
++ ES+T E SVTTT
Sbjct: 204 ATTTQESITTTESDSVTTT 222
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/106 (21%), Positives = 47/106 (44%)
Frame = -1
Query: 415 PNDVEISKAFLRPLVSA*KPQGKAKSNPAKGADASKPVSLSPTPRSQLEAATTTLYPNMS 236
P ++ ++ RP+ K QG A + P + P + + + +Q + TTT+ P+ +
Sbjct: 553 PEGFQVGQSQYRPIE---KKQGFA-TLPLRKVSTVPPTTSTSSTTTQKPSTTTTV-PSTT 607
Query: 235 MATATTIILHTPNSV*LYRPCPANSTASS*PHESVTLPEQPSVTTT 98
+ TT TP + +T ++ + T P+ + TT+
Sbjct: 608 PTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTS 653
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/106 (21%), Positives = 47/106 (44%)
Frame = -1
Query: 415 PNDVEISKAFLRPLVSA*KPQGKAKSNPAKGADASKPVSLSPTPRSQLEAATTTLYPNMS 236
P ++ ++ RP+ K QG A + P + P + + + +Q + TTT+ P+ +
Sbjct: 553 PEGFQVGQSQYRPIE---KKQGFA-TLPLRKVSTVPPTTSTSSTTTQKPSTTTTV-PSTT 607
Query: 235 MATATTIILHTPNSV*LYRPCPANSTASS*PHESVTLPEQPSVTTT 98
+ TT TP + +T ++ + T P+ + TT+
Sbjct: 608 PTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTS 653
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 2.8
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = -1
Query: 313 SKPVSLS-PTPRSQLEAATTTLYPNMSMATATTIILHTPNSV*LYRPCPANS-TASS*PH 140
S P +++ PT + + T T N + AT TT+ TP++ P P + + ++
Sbjct: 479 SPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVPTTTGSPTTQTT 538
Query: 139 ESVTLPEQPSVTT-TSLFIVENHKKKTLTIVKLFNILT 29
VT P PS TT T+ + + +T L LT
Sbjct: 539 APVTKPTVPSSTTQTAPPVTTPTSQPPVTTTSLLTTLT 576
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 28.7 bits (61), Expect = 2.8
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = -1
Query: 319 DASKPVSLSPTPRSQLEAATTTLYPNMSMATATTIILHTPNSV*LYRPCPANSTASS*PH 140
D S S S + S EA++T + T TT+I TP + + S +S
Sbjct: 210 DTSSSTSRSTSTPSSTEASSTVT-STTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTV 268
Query: 139 ESVTLPEQPSVTT 101
S T+P VTT
Sbjct: 269 TSTTVPTTTVVTT 281
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 28.7 bits (61), Expect = 2.8
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = -1
Query: 319 DASKPVSLSPTPRSQLEAATTTLYPNMSMATATTIILHTPNSV*LYRPCPANSTASS*PH 140
D S S S + S EA++T + T TT+I TP + + S +S
Sbjct: 192 DTSSSTSRSTSTPSSTEASSTVT-STTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTV 250
Query: 139 ESVTLPEQPSVTT 101
S T+P VTT
Sbjct: 251 TSTTVPTTTVVTT 263
>U41993-5|AAA83447.2| 451|Caenorhabditis elegans Hypothetical
protein F44A2.2 protein.
Length = 451
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +3
Query: 144 GYDEAVELAGHGRYNYTLLGVCSIIVVAVAIDMFGYSVVVAASSCDLGVGLKETG 308
GY + V + G+ L VC IIV+A I M + G G +E G
Sbjct: 366 GYGDLVPITAGGKVVAALASVCGIIVLAFPISMIIDKFAESTGGWSGGDGDEEQG 420
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +3
Query: 333 GLLFAFPWGFYADTRGRRKALLISTSFGFLFAALSSLSMN---WQFMFASKL---FGCGF 494
G++ G+ AD GRR AL + AAL L+ + + + +L CGF
Sbjct: 110 GMIGGLSSGWLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRLIIGLNCGF 169
Query: 495 STASFTLVIT 524
S+A + +T
Sbjct: 170 SSALVPMFLT 179
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +3
Query: 333 GLLFAFPWGFYADTRGRRKALLISTSFGFLFAALSSLSMN---WQFMFASKL---FGCGF 494
G++ G+ AD GRR AL + AAL L+ + + + +L CGF
Sbjct: 92 GMIGGLSSGWLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRLIIGLNCGF 151
Query: 495 STASFTLVIT 524
S+A + +T
Sbjct: 152 SSALVPMFLT 161
>Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical
protein F52F12.2 protein.
Length = 370
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -2
Query: 435 LKPQTGSRTTWRSVKPSFVLLYPRRSPREKQKAIQQKAPMQANRSP 298
L P T +T ++ PS L P RSP+ +++ ++ Q +P
Sbjct: 299 LPPSTTLSSTPPTISPSAPTLLPTRSPKSREETPTRREEQQVPPNP 344
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 262 TTTLYPNMSMATATTIILHTPNSV*LYRPCPANSTASS*PHESVTLPEQPSVTTTSL 92
+TTL P + T+ ++ T +S + P N+T + P E+ T E TTTS+
Sbjct: 166 STTLSPTTELLTSPETLVSTDSSTSTEQTSPDNTTEIASPMETNTTTE---ATTTSV 219
>U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical
protein F13H8.8 protein.
Length = 520
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -2
Query: 432 KPQTGSRTTWRSVKPSFVLLYPRRSPREKQKAIQQKAPMQANRSP 298
+P TG + + S +R+P++KQ A+ +P+ A + P
Sbjct: 471 RPNTGDSRKFTKIDYSETEHVKKRAPKQKQLAVVVVSPLPAQKHP 515
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 396 LISTSFGFLFAALSSLSMNWQFMFA 470
++ SFG +FA + +L+ NWQF+++
Sbjct: 161 MVLFSFG-IFALIFTLAFNWQFLYS 184
>AF099919-13|AAC68798.1| 636|Caenorhabditis elegans Hypothetical
protein F40G9.1 protein.
Length = 636
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -1
Query: 97 SLFIVENHKKKTLTIVKLFNILTHCSKNIRA 5
+ F ++N +KK + +K+ IL + +KN+ A
Sbjct: 323 TFFFIQNLRKKMILHIKMCKILHYFTKNVEA 353
>AF025452-2|AAB70943.1| 585|Caenorhabditis elegans Hypothetical
protein B0454.6 protein.
Length = 585
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 311 ACIGAFCWIAFCFSLGLL-RGYKRTKEGFTDLHVV 412
A IG+F W+AF F G Y + GF L +V
Sbjct: 455 ALIGSFFWLAFTFRTGFYEHWYGQISIGFNGLLIV 489
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,830,597
Number of Sequences: 27780
Number of extensions: 279310
Number of successful extensions: 934
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -