Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5n10
         (627 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058318-1|AAL13547.1|  872|Drosophila melanogaster GH08353p pro...    30   2.9  
AE014296-3271|AAF49077.2|  872|Drosophila melanogaster CG14183-P...    30   2.9  
X53959-1|CAA37910.1| 1480|Drosophila melanogaster slit protein p...    29   5.1  
AF126540-1|AAD26567.1| 1504|Drosophila melanogaster slit protein...    29   5.1  
AE013599-2126|AAF58097.1| 1504|Drosophila melanogaster CG8355-PC...    29   5.1  
AE013599-2125|AAF58098.1| 1480|Drosophila melanogaster CG8355-PA...    29   5.1  
AE013599-2124|AAM70966.1| 1469|Drosophila melanogaster CG8355-PB...    29   5.1  

>AY058318-1|AAL13547.1|  872|Drosophila melanogaster GH08353p
           protein.
          Length = 872

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 349 LGSYNFRQVANSLHYFLHIYLAMNLANQPTASFEQEKNMTF 471
           L   N  + A  L YFLH+ L +  A QPT  + +E +  F
Sbjct: 650 LSPENTYKYAKDLKYFLHVILKVAKAFQPTIMYIEEAHRLF 690


>AE014296-3271|AAF49077.2|  872|Drosophila melanogaster CG14183-PA
           protein.
          Length = 872

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 349 LGSYNFRQVANSLHYFLHIYLAMNLANQPTASFEQEKNMTF 471
           L   N  + A  L YFLH+ L +  A QPT  + +E +  F
Sbjct: 650 LSPENTYKYAKDLKYFLHVILKVAKAFQPTIMYIEEAHRLF 690


>X53959-1|CAA37910.1| 1480|Drosophila melanogaster slit protein
           protein.
          Length = 1480

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +1

Query: 349 LGSYNFRQVANSLHYFLHIYLAMNLANQPTA-----SFEQEKNMTFINLESVPSNLN 504
           LG    ++++N +   LH    +NL +   +     SFE   ++T +NL S P N N
Sbjct: 602 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 658


>AF126540-1|AAD26567.1| 1504|Drosophila melanogaster slit protein
           protein.
          Length = 1504

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +1

Query: 349 LGSYNFRQVANSLHYFLHIYLAMNLANQPTA-----SFEQEKNMTFINLESVPSNLN 504
           LG    ++++N +   LH    +NL +   +     SFE   ++T +NL S P N N
Sbjct: 626 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 682


>AE013599-2126|AAF58097.1| 1504|Drosophila melanogaster CG8355-PC,
           isoform C protein.
          Length = 1504

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +1

Query: 349 LGSYNFRQVANSLHYFLHIYLAMNLANQPTA-----SFEQEKNMTFINLESVPSNLN 504
           LG    ++++N +   LH    +NL +   +     SFE   ++T +NL S P N N
Sbjct: 626 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 682


>AE013599-2125|AAF58098.1| 1480|Drosophila melanogaster CG8355-PA,
           isoform A protein.
          Length = 1480

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +1

Query: 349 LGSYNFRQVANSLHYFLHIYLAMNLANQPTA-----SFEQEKNMTFINLESVPSNLN 504
           LG    ++++N +   LH    +NL +   +     SFE   ++T +NL S P N N
Sbjct: 602 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 658


>AE013599-2124|AAM70966.1| 1469|Drosophila melanogaster CG8355-PB,
           isoform B protein.
          Length = 1469

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +1

Query: 349 LGSYNFRQVANSLHYFLHIYLAMNLANQPTA-----SFEQEKNMTFINLESVPSNLN 504
           LG    ++++N +   LH    +NL +   +     SFE   ++T +NL S P N N
Sbjct: 602 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 658


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,629,088
Number of Sequences: 53049
Number of extensions: 342438
Number of successful extensions: 556
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)