Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5n08
         (250 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           22   2.9  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           22   2.9  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           22   2.9  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    21   5.1  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    21   6.7  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    21   8.8  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           21   8.8  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    21   8.8  

>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 184 GRLERCNEPRVDFRKTGDFTVVSNGLAVSRGV 89
           G    C  P+V      D    S+GLAVSR V
Sbjct: 104 GNYHECYMPQVIHVSREDQLKDSSGLAVSRAV 135


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 184 GRLERCNEPRVDFRKTGDFTVVSNGLAVSRGV 89
           G    C  P+V      D    S+GLAVSR V
Sbjct: 104 GNYHECYMPQVIHVSREDQLKDSSGLAVSRAV 135


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 184 GRLERCNEPRVDFRKTGDFTVVSNGLAVSRGV 89
           G    C  P+V      D    S+GLAVSR V
Sbjct: 104 GNYHECYMPQVIHVSREDQLKDSSGLAVSRAV 135


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 150 ISGRPETSPSCPTALRSPE 94
           +SG   +SP  PT   SP+
Sbjct: 165 VSGSDMSSPGAPTGSSSPQ 183


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 146 QEDRRLHRRVQRPCGL 99
           QE RR+ +RVQ+ C +
Sbjct: 822 QECRRMLQRVQKHCAI 837


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 99  ETARPLDTTVKSPVF 143
           E  R L TTV +PVF
Sbjct: 483 ENRRKLVTTVSTPVF 497


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -1

Query: 184 GRLERCNEPRVDFRKTGDFTVVSNGLAVSRGV 89
           G    C  P+V      D    S+GL VSR V
Sbjct: 104 GNYHECYMPQVIHVSREDQLKDSSGLTVSRAV 135


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 171 GVMNHE*ISGRPETSPSCPTALR 103
           GVM H+ +S RP        ALR
Sbjct: 744 GVMLHDHLSWRPHVEMVADKALR 766


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,609
Number of Sequences: 2352
Number of extensions: 4624
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12740367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)