Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5n08
         (250 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11192-1|CAA72076.1|  535|Homo sapiens succinic semialdehyde deh...    29   3.6  
L34820-1|AAA67057.1|  323|Homo sapiens succinate semialdehyde de...    29   3.6  
BC034321-1|AAH34321.1|  535|Homo sapiens aldehyde dehydrogenase ...    29   3.6  
AL031230-4|CAA20248.1|  535|Homo sapiens aldehyde dehydrogenase ...    29   3.6  
AJ427355-1|CAD20884.1|  535|Homo sapiens succinic semialdehyde d...    29   3.6  
AJ427354-1|CAD20883.2|  480|Homo sapiens succinic semialdehyde d...    29   3.6  

>Y11192-1|CAA72076.1|  535|Homo sapiens succinic semialdehyde
           dehydrogenase precursor protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 148 FRKTGDFTVVSNGLAVSRGVHD 83
           FR TG   V SN   V RG+HD
Sbjct: 333 FRNTGQTCVCSNQFLVQRGIHD 354


>L34820-1|AAA67057.1|  323|Homo sapiens succinate semialdehyde
           dehydrogenase protein.
          Length = 323

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 148 FRKTGDFTVVSNGLAVSRGVHD 83
           FR TG   V SN   V RG+HD
Sbjct: 121 FRNTGQTCVCSNQFLVQRGIHD 142


>BC034321-1|AAH34321.1|  535|Homo sapiens aldehyde dehydrogenase 5
           family, member A1 (succinate-semialdehyde dehydrogenas
           protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 148 FRKTGDFTVVSNGLAVSRGVHD 83
           FR TG   V SN   V RG+HD
Sbjct: 333 FRNTGQTCVCSNQFLVQRGIHD 354


>AL031230-4|CAA20248.1|  535|Homo sapiens aldehyde dehydrogenase 5
           family, member A1 (succinate-semialdehyde dehydrogenas
           protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 148 FRKTGDFTVVSNGLAVSRGVHD 83
           FR TG   V SN   V RG+HD
Sbjct: 333 FRNTGQTCVCSNQFLVQRGIHD 354


>AJ427355-1|CAD20884.1|  535|Homo sapiens succinic semialdehyde
           dehydrogenase precursor protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 148 FRKTGDFTVVSNGLAVSRGVHD 83
           FR TG   V SN   V RG+HD
Sbjct: 333 FRNTGQTCVCSNQFLVQRGIHD 354


>AJ427354-1|CAD20883.2|  480|Homo sapiens succinic semialdehyde
           dehydrogenase protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 148 FRKTGDFTVVSNGLAVSRGVHD 83
           FR TG   V SN   V RG+HD
Sbjct: 278 FRNTGQTCVCSNQFLVQRGIHD 299


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,463,697
Number of Sequences: 237096
Number of extensions: 570759
Number of successful extensions: 1092
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 76,859,062
effective HSP length: 60
effective length of database: 62,633,302
effective search space used: 1377932644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)