Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5n08
         (250 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021252-1|AAX33400.1|  553|Drosophila melanogaster RE60459p pro...    29   0.65 
AE014297-2215|AAN13711.1|  698|Drosophila melanogaster CG14897-P...    29   0.65 
AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-P...    29   0.65 
BT022214-1|AAY54630.1|  446|Drosophila melanogaster IP12388p pro...    27   3.5  
BT014670-1|AAT27294.1|  184|Drosophila melanogaster AT17982p pro...    27   3.5  
AJ132656-1|CAA10724.1|  336|Drosophila melanogaster myosin heavy...    27   3.5  

>BT021252-1|AAX33400.1|  553|Drosophila melanogaster RE60459p
           protein.
          Length = 553

 Score = 29.5 bits (63), Expect = 0.65
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 41  IYNREFNDALEL-DTIVNASGDRKAVGHDGEVSGLPEIYSW 160
           IYN+   D + L D  ++A+G R  + H G+++   ++Y+W
Sbjct: 61  IYNKSSGDPIHLNDVAIHAAGKRPLL-HGGKITIRDKVYTW 100


>AE014297-2215|AAN13711.1|  698|Drosophila melanogaster CG14897-PA,
           isoform A protein.
          Length = 698

 Score = 29.5 bits (63), Expect = 0.65
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 41  IYNREFNDALEL-DTIVNASGDRKAVGHDGEVSGLPEIYSW 160
           IYN+   D + L D  ++A+G R  + H G+++   ++Y+W
Sbjct: 61  IYNKSSGDPIHLNDVAIHAAGKRPLL-HGGKITIRDKVYTW 100


>AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-PB,
           isoform B protein.
          Length = 1298

 Score = 29.5 bits (63), Expect = 0.65
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 41  IYNREFNDALEL-DTIVNASGDRKAVGHDGEVSGLPEIYSW 160
           IYN+   D + L D  ++A+G R  + H G+++   ++Y+W
Sbjct: 61  IYNKSSGDPIHLNDVAIHAAGKRPLL-HGGKITIRDKVYTW 100


>BT022214-1|AAY54630.1|  446|Drosophila melanogaster IP12388p
           protein.
          Length = 446

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = -1

Query: 181 RLERCNEPRVDFRKTGDFTVVSNGLAVSRGVH 86
           RL   N  R D R+T DF VVSNG       H
Sbjct: 33  RLTVTNRIRSDKRETLDFNVVSNGECTVNTTH 64


>BT014670-1|AAT27294.1|  184|Drosophila melanogaster AT17982p
           protein.
          Length = 184

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 1   RPARQVRKRRPVLHLQPR 54
           RPAR+V KRR V++ +PR
Sbjct: 89  RPARKVTKRRDVINKKPR 106


>AJ132656-1|CAA10724.1|  336|Drosophila melanogaster myosin heavy
          chain protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +1

Query: 1  RPARQVRKRRPVLHLQPRIQRCLGARYDRER 93
          R A QVR+R PVL    R +R    RY RE+
Sbjct: 4  RRAAQVRRRVPVLQDAVRQERQAKERYGREK 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,283,633
Number of Sequences: 53049
Number of extensions: 175035
Number of successful extensions: 715
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 24,988,368
effective HSP length: 62
effective length of database: 21,699,330
effective search space used: 433986600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)