Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5m14
         (313 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D55636-1|BAA21748.1|   56|Homo sapiens smallest subunit of ubiqu...    30   1.7  
BC003594-1|AAH03594.1|   56|Homo sapiens ubiquinol-cytochrome c ...    30   1.7  
BC000462-1|AAH00462.1|   56|Homo sapiens ubiquinol-cytochrome c ...    30   1.7  
AC005943-2|AAC72105.1|   39|Homo sapiens smallest subunit of ubi...    30   1.7  
Y09912-1|CAA71047.1|  367|Homo sapiens transcription factor AP-2...    27   8.8  
X95694-1|CAA64990.1|  449|Homo sapiens AP-2 beta protein.              27   8.8  
BC037225-1|AAH37225.1|  449|Homo sapiens transcription factor AP...    27   8.8  
AL049693-1|CAB89563.3|  460|Homo sapiens transcription factor AP...    27   8.8  
AL031224-2|CAI20235.2|  460|Homo sapiens transcription factor AP...    27   8.8  

>D55636-1|BAA21748.1|   56|Homo sapiens smallest subunit of
           ubiquinol-cytochrome c reductase protein.
          Length = 56

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 139 TDWKVFVANIPYYNGKFK 192
           TDW++ +  +PY NGKFK
Sbjct: 36  TDWRLILDWVPYINGKFK 53


>BC003594-1|AAH03594.1|   56|Homo sapiens ubiquinol-cytochrome c
           reductase, 6.4kDa subunit protein.
          Length = 56

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 139 TDWKVFVANIPYYNGKFK 192
           TDW++ +  +PY NGKFK
Sbjct: 36  TDWRLILDWVPYINGKFK 53


>BC000462-1|AAH00462.1|   56|Homo sapiens ubiquinol-cytochrome c
           reductase, 6.4kDa subunit protein.
          Length = 56

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 139 TDWKVFVANIPYYNGKFK 192
           TDW++ +  +PY NGKFK
Sbjct: 36  TDWRLILDWVPYINGKFK 53


>AC005943-2|AAC72105.1|   39|Homo sapiens smallest subunit of
           ubiquinol-cytochrome c reductase protein.
          Length = 39

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 139 TDWKVFVANIPYYNGKFK 192
           TDW++ +  +PY NGKFK
Sbjct: 19  TDWRLILDWVPYINGKFK 36


>Y09912-1|CAA71047.1|  367|Homo sapiens transcription factor AP-2
           beta protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 213 SLLLFESLKLSVVIGYICDEYFPVREI*ERYKSSTAEPS 97
           SL+  E++ L+   GYIC+  FP + + E       +PS
Sbjct: 299 SLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPS 337


>X95694-1|CAA64990.1|  449|Homo sapiens AP-2 beta protein.
          Length = 449

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 213 SLLLFESLKLSVVIGYICDEYFPVREI*ERYKSSTAEPS 97
           SL+  E++ L+   GYIC+  FP + + E       +PS
Sbjct: 299 SLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPS 337


>BC037225-1|AAH37225.1|  449|Homo sapiens transcription factor AP-2
           beta (activating enhancer binding protein 2 beta)
           protein.
          Length = 449

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 213 SLLLFESLKLSVVIGYICDEYFPVREI*ERYKSSTAEPS 97
           SL+  E++ L+   GYIC+  FP + + E       +PS
Sbjct: 299 SLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPS 337


>AL049693-1|CAB89563.3|  460|Homo sapiens transcription factor AP-2
           beta (activating enhancer binding protein 2 beta)
           protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 213 SLLLFESLKLSVVIGYICDEYFPVREI*ERYKSSTAEPS 97
           SL+  E++ L+   GYIC+  FP + + E       +PS
Sbjct: 310 SLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPS 348


>AL031224-2|CAI20235.2|  460|Homo sapiens transcription factor AP-2
           beta (activating enhancer binding protein 2 beta)
           protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 213 SLLLFESLKLSVVIGYICDEYFPVREI*ERYKSSTAEPS 97
           SL+  E++ L+   GYIC+  FP + + E       +PS
Sbjct: 310 SLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPS 348


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,612,700
Number of Sequences: 237096
Number of extensions: 739738
Number of successful extensions: 1454
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)