Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5m11
(644 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004913-1|AAO49166.1| 212|Drosophila melanogaster GM01172p pro... 135 6e-32
AE014296-2150|AAF49911.1| 212|Drosophila melanogaster CG10681-P... 135 6e-32
J03502-1|AAA28972.1| 252|Drosophila melanogaster protein ( D.me... 31 1.3
AY060414-1|AAL25453.1| 252|Drosophila melanogaster LD37158p pro... 31 1.3
AE014297-2001|AAF55164.2| 252|Drosophila melanogaster CG4898-PA... 31 1.3
AY069690-1|AAL39835.1| 494|Drosophila melanogaster LD46328p pro... 30 2.3
AE014297-2874|AAF55812.2| 494|Drosophila melanogaster CG33094-P... 30 2.3
AY113652-1|AAM29657.1| 918|Drosophila melanogaster SD14970p pro... 30 3.1
AE014296-1695|AAF50237.1| 918|Drosophila melanogaster CG3335-PA... 30 3.1
BT015248-1|AAT94477.1| 1906|Drosophila melanogaster LP21012p pro... 29 4.1
AE014297-3343|AAS65196.1| 709|Drosophila melanogaster CG33337-P... 29 4.1
AE014296-511|AAF47687.1| 1906|Drosophila melanogaster CG1241-PA ... 29 4.1
DQ138926-1|ABA86532.1| 1873|Drosophila melanogaster CG1241 protein. 29 7.1
AE014297-1991|AAF55163.2| 339|Drosophila melanogaster CG4898-PB... 29 7.1
>BT004913-1|AAO49166.1| 212|Drosophila melanogaster GM01172p
protein.
Length = 212
Score = 135 bits (326), Expect = 6e-32
Identities = 72/139 (51%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
Frame = +2
Query: 98 NGTPESDFSIECFQNYTAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCN 277
+ TP+ + S F N +A E F+Q LAGMV+Q DVE +IRAQK MLQRFEKT EML NCN
Sbjct: 14 DATPDLE-SFTGFGN-SAAEAFIQSLAGMVNQGDVETMIRAQKQMLQRFEKTNEMLLNCN 71
Query: 278 QLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPEAYKEAVAESLAN 457
LS SRL++AS +FK+H + L EM+KDL++IF+KIR IK KL SQ+P Y E + +
Sbjct: 72 ALSQSRLKSASEDFKRHVKCLSEMKKDLDYIFRKIRIIKQKLQSQFPAIYAEVQPQRSSL 131
Query: 458 RKPLVDDED--LKPSEEKP 508
+ DD + K + E P
Sbjct: 132 AEEAEDDTEAQAKKTAETP 150
>AE014296-2150|AAF49911.1| 212|Drosophila melanogaster CG10681-PA
protein.
Length = 212
Score = 135 bits (326), Expect = 6e-32
Identities = 72/139 (51%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
Frame = +2
Query: 98 NGTPESDFSIECFQNYTAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCN 277
+ TP+ + S F N +A E F+Q LAGMV+Q DVE +IRAQK MLQRFEKT EML NCN
Sbjct: 14 DATPDLE-SFTGFGN-SAAEAFIQSLAGMVNQGDVETMIRAQKQMLQRFEKTNEMLLNCN 71
Query: 278 QLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPEAYKEAVAESLAN 457
LS SRL++AS +FK+H + L EM+KDL++IF+KIR IK KL SQ+P Y E + +
Sbjct: 72 ALSQSRLKSASEDFKRHVKCLSEMKKDLDYIFRKIRIIKQKLQSQFPAIYAEVQPQRSSL 131
Query: 458 RKPLVDDED--LKPSEEKP 508
+ DD + K + E P
Sbjct: 132 AEEAEDDTEAQAKKTAETP 150
>J03502-1|AAA28972.1| 252|Drosophila melanogaster protein (
D.melanogaster tropomyosinII non-muscle isoform mRNA,
complete cds. ).
Length = 252
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +2
Query: 212 IRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAI 391
+R K +++++ E QL R A +E + + + +DLE +++ +
Sbjct: 18 MRQTKEEMEKYKDECEEFHKRLQLEVVRREEAESEVAALNRRIQLLEEDLERSEERLGSA 77
Query: 392 KTKLSSQYPEA-YKEAVAESLANRKPLVDDEDLKPSEEKPESKMVA 526
KLS A E + ++L NR + DD+ + ++K++A
Sbjct: 78 TAKLSEASQAADESERIRKALENRTNMEDDKVALLENQLAQAKLIA 123
>AY060414-1|AAL25453.1| 252|Drosophila melanogaster LD37158p
protein.
Length = 252
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +2
Query: 212 IRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAI 391
+R K +++++ E QL R A +E + + + +DLE +++ +
Sbjct: 18 MRQTKEEMEKYKDECEEFHKRLQLEVVRREEAESEVAALNRRIQLLEEDLERSEERLGSA 77
Query: 392 KTKLSSQYPEA-YKEAVAESLANRKPLVDDEDLKPSEEKPESKMVA 526
KLS A E + ++L NR + DD+ + ++K++A
Sbjct: 78 TAKLSEASQAADESERIRKALENRTNMEDDKVALLENQLAQAKLIA 123
>AE014297-2001|AAF55164.2| 252|Drosophila melanogaster CG4898-PA,
isoform A protein.
Length = 252
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +2
Query: 212 IRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAI 391
+R K +++++ E QL R A +E + + + +DLE +++ +
Sbjct: 18 MRQTKEEMEKYKDECEEFHKRLQLEVVRREEAESEVAALNRRIQLLEEDLERSEERLGSA 77
Query: 392 KTKLSSQYPEA-YKEAVAESLANRKPLVDDEDLKPSEEKPESKMVA 526
KLS A E + ++L NR + DD+ + ++K++A
Sbjct: 78 TAKLSEASQAADESERIRKALENRTNMEDDKVALLENQLAQAKLIA 123
>AY069690-1|AAL39835.1| 494|Drosophila melanogaster LD46328p
protein.
Length = 494
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 272 CNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPEA 424
CN ++ S+++ E HT + + RKDLE +FKK + KL ++ +A
Sbjct: 104 CNDVN-SQIKTWQKENYHHTLMQIKERKDLEDLFKKAQKPWAKLLAKVEKA 153
>AE014297-2874|AAF55812.2| 494|Drosophila melanogaster CG33094-PB
protein.
Length = 494
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 272 CNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPEA 424
CN ++ S+++ E HT + + RKDLE +FKK + KL ++ +A
Sbjct: 104 CNDVN-SQIKTWQKENYHHTLMQIKERKDLEDLFKKAQKPWAKLLAKVEKA 153
>AY113652-1|AAM29657.1| 918|Drosophila melanogaster SD14970p
protein.
Length = 918
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 371 FKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPSEE-KPESKMV 523
FKK+ K K + Y E E V + +P++ + KP EE KPE K +
Sbjct: 604 FKKLAYSKFKNAPLYLEWAPEQVFTKTLSGEPVIPKSEPKPKEEAKPEEKPI 655
>AE014296-1695|AAF50237.1| 918|Drosophila melanogaster CG3335-PA
protein.
Length = 918
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 371 FKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPSEE-KPESKMV 523
FKK+ K K + Y E E V + +P++ + KP EE KPE K +
Sbjct: 604 FKKLAYSKFKNAPLYLEWAPEQVFTKTLSGEPVIPKSEPKPKEEVKPEEKPI 655
>BT015248-1|AAT94477.1| 1906|Drosophila melanogaster LP21012p
protein.
Length = 1906
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/91 (27%), Positives = 42/91 (46%)
Frame = +2
Query: 110 ESDFSIECFQNYTAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSA 289
+S FS +C YT+ V+GL G VD+TD + E+ E +C Q S
Sbjct: 727 KSPFSSKCTFGYTS---HVEGLDGSVDKTD--------SLLPGETEEINEFCDSCTQSSK 775
Query: 290 SRLRAASTEFKKHTQLLFEMRKDLEFIFKKI 382
++ A F H +++ E + E I+ ++
Sbjct: 776 LKIFA----FIPHVKVVLESKSMYELIYNRL 802
>AE014297-3343|AAS65196.1| 709|Drosophila melanogaster CG33337-PA
protein.
Length = 709
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -2
Query: 169 LNKNFGRSVVLEAFYREITFWSTVRHYLLFSYTIHYI 59
+NK R+ + Y+ + FWST+ +LFSY ++ +
Sbjct: 611 INKRIVRTNTYFSNYQMLNFWSTMGFTVLFSYLLYLL 647
>AE014296-511|AAF47687.1| 1906|Drosophila melanogaster CG1241-PA
protein.
Length = 1906
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/91 (27%), Positives = 42/91 (46%)
Frame = +2
Query: 110 ESDFSIECFQNYTAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSA 289
+S FS +C YT+ V+GL G VD+TD + E+ E +C Q S
Sbjct: 727 KSPFSSKCTFGYTS---HVEGLDGSVDKTD--------SLLPGETEEINEFCDSCTQSSK 775
Query: 290 SRLRAASTEFKKHTQLLFEMRKDLEFIFKKI 382
++ A F H +++ E + E I+ ++
Sbjct: 776 LKIFA----FIPHVKVVLESKSMYELIYNRL 802
>DQ138926-1|ABA86532.1| 1873|Drosophila melanogaster CG1241 protein.
Length = 1873
Score = 28.7 bits (61), Expect = 7.1
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = +2
Query: 110 ESDFSIECFQNYTAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSA 289
+S FS +C YT+ V+GL G VD+TD + E+ E +C Q +
Sbjct: 708 KSPFSSKCTFGYTS---HVEGLDGSVDKTD--------SLLPGETEEINEFCDSCTQ--S 754
Query: 290 SRLRAASTEFKKHTQLLFEMRKDLEFIFKKI 382
S+L+ + F H +++ E + E I+ ++
Sbjct: 755 SKLKIFT--FIPHVKVVLESKSMYELIYNRL 783
>AE014297-1991|AAF55163.2| 339|Drosophila melanogaster CG4898-PB,
isoform B protein.
Length = 339
Score = 28.7 bits (61), Expect = 7.1
Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Frame = +2
Query: 212 IRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAI 391
+R K +++++ E QL R A +E + + + +DLE +++ +
Sbjct: 104 MRQTKEEMEKYKDECEEFHKRLQLEVVRREEAESEVAALNRRIQLLEEDLERSEERLGSA 163
Query: 392 KTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPSEEK-PESKMVA 526
KLS A + A + + L D+E + E + E++ +A
Sbjct: 164 TAKLSEASQAADESERARKILENRALADEERMDALENQLKEARFLA 209
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,083,386
Number of Sequences: 53049
Number of extensions: 536181
Number of successful extensions: 1538
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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