Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5m07
         (138 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    20   2.6  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    19   6.1  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    19   6.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    19   6.1  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    19   6.1  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    19   6.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   6.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    18   8.0  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 124 KFINKMYFFFINEVIYDI 71
           K +++MYFF ++  I D+
Sbjct: 70  KKLSRMYFFILHLSIADL 87


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 4/14 (28%), Positives = 10/14 (71%)
 Frame = -1

Query: 135 FFWLNLLIRCIFFS 94
           +++ NL++ C+  S
Sbjct: 213 YYFFNLIVPCVLIS 226


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 4/14 (28%), Positives = 10/14 (71%)
 Frame = -1

Query: 135 FFWLNLLIRCIFFS 94
           +++ NL++ C+  S
Sbjct: 213 YYFFNLIVPCVLIS 226


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 4/14 (28%), Positives = 10/14 (71%)
 Frame = -1

Query: 135 FFWLNLLIRCIFFS 94
           +++ NL++ C+  S
Sbjct: 213 YYFFNLIVPCVLIS 226


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 4/14 (28%), Positives = 10/14 (71%)
 Frame = -1

Query: 135 FFWLNLLIRCIFFS 94
           +++ NL++ C+  S
Sbjct: 213 YYFFNLIVPCVLIS 226


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 4/14 (28%), Positives = 10/14 (71%)
 Frame = -1

Query: 135 FFWLNLLIRCIFFS 94
           +++ NL++ C+  S
Sbjct: 213 YYFFNLIVPCVLIS 226


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 138 FFFWLNLLIRCIF 100
           +F++++LL  C F
Sbjct: 260 YFYYMHLLFCCAF 272


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 93  MKKKYILLIN 122
           MKK+Y  LIN
Sbjct: 364 MKKRYSALIN 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,080
Number of Sequences: 336
Number of extensions: 127
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 26
effective length of database: 113,849
effective search space used:  2163131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)