Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5m01
         (645 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D57350 Cluster: PREDICTED: hypothetical protein;...    45   0.001
UniRef50_UPI0000DB7786 Cluster: PREDICTED: hypothetical protein;...    37   0.36 
UniRef50_Q6PYZ2 Cluster: DBEI; n=4; Viridiplantae|Rep: DBEI - Os...    33   7.8  

>UniRef50_UPI0000D57350 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 289

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +1

Query: 499 AKKEAVIEK-KNRKNKAGAEVEKPADFDDGNWEEVP 603
           A K  VIE+ KN+KN      EKP DFDDGNWE VP
Sbjct: 118 ANKNKVIEEVKNKKNLKKFLSEKPVDFDDGNWETVP 153


>UniRef50_UPI0000DB7786 Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 293

 Score = 37.1 bits (82), Expect = 0.36
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +1

Query: 496 LAKKEAVIEKKNRKNKAGAEVEKPADFDDGNWEE 597
           + K+  + + KN+KN      EKP DFD+G+WE+
Sbjct: 127 VGKENKIEQVKNKKNLKNLFQEKPIDFDEGDWEQ 160


>UniRef50_Q6PYZ2 Cluster: DBEI; n=4; Viridiplantae|Rep: DBEI -
           Ostreococcus tauri
          Length = 851

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 20  GTSQPRHHVSVSHFII*CLICWLLSYHIDTF 112
           G +   +H  V  FI+ CL  W+L YHID F
Sbjct: 433 GNTMNCNHPVVREFILECLRYWVLEYHIDGF 463


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,607,744
Number of Sequences: 1657284
Number of extensions: 7168766
Number of successful extensions: 15074
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15070
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)