Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5m01
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   2.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   6.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   6.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   6.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   6.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   6.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 6/16 (37%), Positives = 15/16 (93%)
 Frame = -3

Query: 601 VPLPNYHHQSQQVFQL 554
           VP+PN +++++QV+++
Sbjct: 772 VPIPNKYYEAKQVYRI 787


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 192 LCVSHLFQDLHFPYLVLRLQLF 127
           +CVS++F  +HF Y V  +  +
Sbjct: 101 ICVSNVFDFVHFYYPVATMSFY 122


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 67  LVFNLLAVIIPYRHI 111
           + F  LAV +PY+H+
Sbjct: 126 VAFRSLAVWVPYKHL 140


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 328 LWQISCRPILAATCRIAAVQQN 263
           LW I+CR +  A+  +A   QN
Sbjct: 175 LWYINCRAVGNASTALAESFQN 196


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 328 LWQISCRPILAATCRIAAVQQN 263
           LW I+CR +  A+  +A   QN
Sbjct: 175 LWYINCRAVGNASTALAESFQN 196


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 67  LVFNLLAVIIPYRHI 111
           + F  LAV +PY+H+
Sbjct: 126 VAFRSLAVWVPYKHL 140


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 328 LWQISCRPILAATCRIAAVQQN 263
           LW I+CR +  A+  +A   QN
Sbjct: 175 LWYINCRAVGNASTALAESFQN 196


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 138 LQLFYCSHTNVSIWYDN 88
           L +FYC   +V   +DN
Sbjct: 72  LVIFYCQEGSVDFLFDN 88


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 138 LQLFYCSHTNVSIWYDN 88
           L +FYC   +V   +DN
Sbjct: 305 LVIFYCQEGSVDFLFDN 321


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 138 LQLFYCSHTNVSIWYDN 88
           L +FYC   +V   +DN
Sbjct: 305 LVIFYCQEGSVDFLFDN 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,753
Number of Sequences: 336
Number of extensions: 2185
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)