Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5m01
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    26   1.2  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    26   1.2  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   6.3  
U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase...    23   8.3  

>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 201 EHDLCVSHLFQDLHFPYLVLRLQ 133
           EH+LCV  + Q+L F ++ L  Q
Sbjct: 204 EHELCVGRIAQELGFQHVTLSHQ 226


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 201 EHDLCVSHLFQDLHFPYLVLRLQ 133
           EH+LCV  + Q+L F ++ L  Q
Sbjct: 204 EHELCVGRIAQELGFQHVTLSHQ 226


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 406 RNQPWSSHHQM*IGWVKTSSPFFYS 332
           R Q W++HH M +   +T+SP  +S
Sbjct: 387 RGQIWNTHHGMGMFGNQTTSPDAFS 411


>U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 89

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 222 CFSLCGVGICFWV 260
           CFS  GVG  FW+
Sbjct: 8   CFSRYGVGPIFWI 20


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,832
Number of Sequences: 2352
Number of extensions: 8210
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)