Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5l10
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83234-1|CAB70169.1|  313|Caenorhabditis elegans Hypothetical pr...    66   2e-11
Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical pr...    34   0.085
AC024881-3|AAK71413.1|  306|Caenorhabditis elegans Serpentine re...    31   0.60 
Z73898-3|CAC42390.2|  606|Caenorhabditis elegans Hypothetical pr...    31   0.79 
Z73898-2|CAC42388.1|  667|Caenorhabditis elegans Hypothetical pr...    31   0.79 
Z73898-1|CAC42389.1|  647|Caenorhabditis elegans Hypothetical pr...    31   0.79 
M23064-1|AAA27892.1|  609|Caenorhabditis elegans Na+/H+ antiport...    31   0.79 
AF497835-1|AAM18113.1|  647|Caenorhabditis elegans putative Na-H...    31   0.79 
AF497834-1|AAM18112.1|  667|Caenorhabditis elegans putative Na-H...    31   0.79 
AF016420-6|AAB65311.3|  530|Caenorhabditis elegans Udp-glucurono...    29   1.8  
U13072-3|AAK31396.4|  326|Caenorhabditis elegans Serpentine rece...    29   2.4  
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical...    29   3.2  
AF026214-5|AAB71310.1|  525|Caenorhabditis elegans Hypothetical ...    29   3.2  
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ...    28   4.2  
U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical...    28   5.6  
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ...    28   5.6  
U80447-8|AAB37812.3|  900|Caenorhabditis elegans Patched related...    27   7.4  
U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine rece...    27   9.7  
AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical...    27   9.7  

>Z83234-1|CAB70169.1|  313|Caenorhabditis elegans Hypothetical
           protein K09E4.3 protein.
          Length = 313

 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 27/76 (35%), Positives = 48/76 (63%)
 Frame = +3

Query: 288 IFDRKTKMIQRERAACNDEYHLSEYVKEEIGWRTADKIFDIKRTFKNAVELGASRGYVSR 467
           +FDR+ K  QR+ A    ++  ++Y+KEEIGWR ADK+FD+ +     +++G   G+++ 
Sbjct: 2   VFDRQMKRGQRDWAVRQPDFKAAQYLKEEIGWRVADKVFDLTKFNPLVLDIGCGVGHIAP 61

Query: 468 HFLPDSVEKVTLCDTS 515
           H + ++V K+   D S
Sbjct: 62  HLIKENVGKIIQVDMS 77


>Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical
           protein F35E2.7 protein.
          Length = 633

 Score = 33.9 bits (74), Expect = 0.085
 Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -3

Query: 415 LLMSNILSAVRQPISSLTYSDKWYSSLQAA-LSLCIILVFLSNIFIVRYIEL 263
           LL+  ++S++   +      +KWY +L +  LSL +I++F  NI +++Y +L
Sbjct: 342 LLIVALISSILLAVLVFETFEKWYLTLTSTNLSLLVIILFFLNILLIKYDKL 393


>AC024881-3|AAK71413.1|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein6 protein.
          Length = 306

 Score = 31.1 bits (67), Expect = 0.60
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -3

Query: 430 AFLNVLLMSNILSAVRQPISSLTYSDKWYSSLQAALSLCIILVFLSNIFIVRYIELAVFC 251
           A + + L+ +IL  V+ P    T+S +WY  L   L +   ++F    FI    E+ +FC
Sbjct: 96  AMIMLFLVVDILVIVKFPRFYHTFSTEWYIILALILPVIFGIIFFIWGFIETDDEIVIFC 155


>Z73898-3|CAC42390.2|  606|Caenorhabditis elegans Hypothetical
           protein ZK822.3c protein.
          Length = 606

 Score = 30.7 bits (66), Expect = 0.79
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 575 HYHLFILNALTNYCLIEMSSGCVTQCHLLHAVR 477
           H+ L+ + A   +CLI  + G V QC++L+  R
Sbjct: 288 HFDLYFICATLFFCLIYRAIGIVVQCYILNRFR 320


>Z73898-2|CAC42388.1|  667|Caenorhabditis elegans Hypothetical
           protein ZK822.3b protein.
          Length = 667

 Score = 30.7 bits (66), Expect = 0.79
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 575 HYHLFILNALTNYCLIEMSSGCVTQCHLLHAVR 477
           H+ L+ + A   +CLI  + G V QC++L+  R
Sbjct: 348 HFDLYFICATLFFCLIYRAIGIVVQCYILNRFR 380


>Z73898-1|CAC42389.1|  647|Caenorhabditis elegans Hypothetical
           protein ZK822.3a protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 0.79
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 575 HYHLFILNALTNYCLIEMSSGCVTQCHLLHAVR 477
           H+ L+ + A   +CLI  + G V QC++L+  R
Sbjct: 328 HFDLYFICATLFFCLIYRAIGIVVQCYILNRFR 360


>M23064-1|AAA27892.1|  609|Caenorhabditis elegans Na+/H+ antiporter
           protein.
          Length = 609

 Score = 30.7 bits (66), Expect = 0.79
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 575 HYHLFILNALTNYCLIEMSSGCVTQCHLLHAVR 477
           H+ L+ + A   +CLI  + G V QC++L+  R
Sbjct: 291 HFDLYFICATLFFCLIYRAIGIVVQCYILNRFR 323


>AF497835-1|AAM18113.1|  647|Caenorhabditis elegans putative Na-H
           exchanger isoform 9b protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 0.79
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 575 HYHLFILNALTNYCLIEMSSGCVTQCHLLHAVR 477
           H+ L+ + A   +CLI  + G V QC++L+  R
Sbjct: 328 HFDLYFICATLFFCLIYRAIGIVVQCYILNRFR 360


>AF497834-1|AAM18112.1|  667|Caenorhabditis elegans putative Na-H
           exchanger isoform 9a protein.
          Length = 667

 Score = 30.7 bits (66), Expect = 0.79
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 575 HYHLFILNALTNYCLIEMSSGCVTQCHLLHAVR 477
           H+ L+ + A   +CLI  + G V QC++L+  R
Sbjct: 348 HFDLYFICATLFFCLIYRAIGIVVQCYILNRFR 380


>AF016420-6|AAB65311.3|  530|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein7 protein.
          Length = 530

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 186 SNAKNIQADIRNIVQNSSYAAKQKTASSIYRTMNI 290
           SNAK ++  I+N++QN  Y A  K  S++ +   I
Sbjct: 425 SNAKKLKKVIQNMIQNPKYLANAKKLSNLLQKQPI 459


>U13072-3|AAK31396.4|  326|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 3 protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 20/85 (23%), Positives = 42/85 (49%)
 Frame = -3

Query: 424 LNVLLMSNILSAVRQPISSLTYSDKWYSSLQAALSLCIILVFLSNIFIVRYIELAVFCFA 245
           +NV+ + N+LS V   + +  +S  + +      + C +L++ + +F + Y  +  F  A
Sbjct: 223 INVVSIFNLLSTVSASLDNFNFSQTFLNVAATLFNFC-VLIYGTLVFSLFYYLIPQFRSA 281

Query: 244 AYELF*TMFRISACIFFAFDPNKER 170
             ++F  M  ++A   F  D  KE+
Sbjct: 282 LKDVFMKMKILNAVASFP-DLRKEK 305


>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
           protein Y39B6A.30 protein.
          Length = 1408

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 10/32 (31%), Positives = 22/32 (68%)
 Frame = +2

Query: 125 NKANKNALLTVSKFTSFFIGIECKKYTGRYTK 220
           N+A+++ ++TVSK +   + I  +KYT  +++
Sbjct: 277 NEASRSDMMTVSKLSDRLVSIPSRKYTSGFSR 308


>AF026214-5|AAB71310.1|  525|Caenorhabditis elegans Hypothetical
           protein F52H2.6 protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 22/91 (24%), Positives = 39/91 (42%)
 Frame = +3

Query: 231 NSSYAAKQKTASSIYRTMNIFDRKTKMIQRERAACNDEYHLSEYVKEEIGWRTADKIFDI 410
           N+ +  + +   ++    N   RK K IQ +    ND    S+ V    GW T    F +
Sbjct: 42  NTVFDFRNRIVHAVNSAPNAHVRKVKHIQEQLKEWNDNGRKSKLVNARPGWLTMSFRFPL 101

Query: 411 KRTFKNAVELGASRGYVSRHFLPDSVEKVTL 503
            +  +NA ++   + +     L   VEK+T+
Sbjct: 102 YK--ENATKIATDKLF---DILDLDVEKMTV 127


>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
            protein Y108G3AL.7 protein.
          Length = 1192

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 502  SVTFSTLSGRKCRDTYPREAPSSTAFLNVLLMSNILSAVRQPISSLTYSDKWY 344
            +VT   LS  K     PR+  ++T F+   ++S+ILS   Q + +  Y D+W+
Sbjct: 943  TVTTPVLSVPKSEGRGPRKEDTTTKFVRANVLSHILSG--QKLRAF-YGDEWF 992


>U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical
           protein F10D7.1 protein.
          Length = 656

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -3

Query: 439 SSTAFLNVLLMSNILSAVRQPISSLTYSDKWYSSLQAALSLCIILVFLSNIFIVRYIELA 260
           S TA L  + + N    +R+P+S       +  +  A  SLC I  +L NIF   +   A
Sbjct: 27  SITALLVNVYLLNCARYLRRPVSVNLRLCVFLLACDALCSLCYIFTYLINIFFSHFSNCA 86


>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
           protein Y39B6A.18 protein.
          Length = 1352

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +2

Query: 125 NKANKNALLTVSKFTSFFIGIECKKYTGRYT 217
           N+A+++ ++TVSK +   + I  +KYT  ++
Sbjct: 249 NEASRSDMMTVSKLSDRLVSIPSRKYTSGFS 279


>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
           protein Y80D3A.8 protein.
          Length = 1293

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +2

Query: 125 NKANKNALLTVSKFTSFFIGIECKKYTGRYT 217
           N+A+++ ++TVSK +   + I  +KYT  ++
Sbjct: 295 NEASRSDMMTVSKLSDRLVSIPSRKYTSGFS 325


>U80447-8|AAB37812.3|  900|Caenorhabditis elegans Patched related
           family protein 10 protein.
          Length = 900

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = -3

Query: 424 LNVLLMSNILSAVRQPISSLTYSDKWYSSLQAALSLCIILVFLSNIFIV 278
           L+VL +SN    +   +  LTY +  Y+ + A +   ++ V   N+F++
Sbjct: 305 LSVLGVSNAGMGIASAMGMLTYLEIQYNDIIAVMPFLVVAVGTDNMFLM 353


>U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein22 protein.
          Length = 306

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 317 LYHLSFPIKYIHRSVYRTCSLLFCC 243
           LY +SFP+KY    VY+   +  CC
Sbjct: 105 LYSVSFPVKYSTIPVYQYGIVFSCC 129


>AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical
            protein Y22D7AR.2 protein.
          Length = 1140

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 231  FERCFVYLPVYFLHSIPIKNDVNLDTV 151
            F   FVY+ ++F HS  +K DV+ D V
Sbjct: 995  FVALFVYIGLWFYHSRKVKLDVSPDLV 1021


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,087,465
Number of Sequences: 27780
Number of extensions: 232907
Number of successful extensions: 762
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)