Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5k17
(585 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10413-1|AAA86285.1| 379|Homo sapiens farnesyl-protein transfer... 258 1e-68
L00634-1|AAA35853.1| 379|Homo sapiens farnesyl-protein transfer... 258 1e-68
BT009854-1|AAP88856.1| 379|Homo sapiens farnesyltransferase, CA... 258 1e-68
BC084566-1|AAH84566.1| 379|Homo sapiens farnesyltransferase, CA... 258 1e-68
BC017029-1|AAH17029.2| 376|Homo sapiens FNTA protein protein. 258 1e-68
BC037295-1|AAH37295.1| 214|Homo sapiens FNTA protein protein. 208 8e-54
Y08200-1|CAA69382.1| 567|Homo sapiens rab geranylgeranyl transf... 82 1e-15
CR541797-1|CAG46596.1| 567|Homo sapiens RABGGTA protein. 82 1e-15
BC003093-1|AAH03093.1| 567|Homo sapiens Rab geranylgeranyltrans... 82 1e-15
BC053622-1|AAH53622.1| 403|Homo sapiens PTAR1 protein protein. 44 5e-04
AL162412-2|CAI10945.2| 312|Homo sapiens protein prenyltransfera... 44 5e-04
AL162412-1|CAI10944.1| 350|Homo sapiens protein prenyltransfera... 39 0.011
X03145-5|CAA26919.1| 152|Homo sapiens protein ( Human KpnI repe... 29 9.1
AF180681-1|AAF36817.1| 1544|Homo sapiens guanine nucleotide exch... 29 9.1
AB002380-1|BAA20836.2| 1443|Homo sapiens KIAA0382 protein protein. 29 9.1
>L10413-1|AAA86285.1| 379|Homo sapiens farnesyl-protein transferase
alpha-subunit protein.
Length = 379
Score = 258 bits (632), Expect = 1e-68
Identities = 109/172 (63%), Positives = 137/172 (79%)
Frame = +2
Query: 68 WIPYKERPEWSDVTPVPEDDGPNPVVVIAHSEKFEDVYDYFRAVLQSNEKSERVLHLTKD 247
++ Y++R EW+D+ PVP++DGPNPVV I +S+KF DVYDYFRAVLQ +E+SER LT+D
Sbjct: 63 YVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRD 122
Query: 248 ALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRRVLVEWLQDP 427
A+ELN ANYTVW +RR LLK L DL E++Y+ A+I+ PKNYQVWHHRRVLVEWL+DP
Sbjct: 123 AIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDP 182
Query: 428 TMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVRNN 583
+ ELE D L QD KNYHAWQHRQW I+ F L++ EL +VD L+ +DVRNN
Sbjct: 183 SQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN 234
Score = 62.9 bits (146), Expect = 8e-10
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Frame = +2
Query: 176 VYDYFRAVLQSNEKS--ERVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVE 349
V+ + R +L+S +K E + ++T +E P NY VW +RR L++ L D EL+++
Sbjct: 133 VWHFRRVLLKSLQKDLHEEMNYITA-IIEEQPKNYQVWHHRRVLVEWLR-DPSQELEFIA 190
Query: 350 AVIKNSPKNYQVWHHRRVLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAI 511
++ KNY W HR+ +++ + EL+ L +D +N W R + I
Sbjct: 191 DILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVI 244
>L00634-1|AAA35853.1| 379|Homo sapiens farnesyl-protein transferase
alpha-subunit protein.
Length = 379
Score = 258 bits (632), Expect = 1e-68
Identities = 109/172 (63%), Positives = 137/172 (79%)
Frame = +2
Query: 68 WIPYKERPEWSDVTPVPEDDGPNPVVVIAHSEKFEDVYDYFRAVLQSNEKSERVLHLTKD 247
++ Y++R EW+D+ PVP++DGPNPVV I +S+KF DVYDYFRAVLQ +E+SER LT+D
Sbjct: 63 YVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRD 122
Query: 248 ALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRRVLVEWLQDP 427
A+ELN ANYTVW +RR LLK L DL E++Y+ A+I+ PKNYQVWHHRRVLVEWL+DP
Sbjct: 123 AIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDP 182
Query: 428 TMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVRNN 583
+ ELE D L QD KNYHAWQHRQW I+ F L++ EL +VD L+ +DVRNN
Sbjct: 183 SQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN 234
Score = 62.9 bits (146), Expect = 8e-10
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Frame = +2
Query: 176 VYDYFRAVLQSNEKS--ERVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVE 349
V+ + R +L+S +K E + ++T +E P NY VW +RR L++ L D EL+++
Sbjct: 133 VWHFRRVLLKSLQKDLHEEMNYITA-IIEEQPKNYQVWHHRRVLVEWLR-DPSQELEFIA 190
Query: 350 AVIKNSPKNYQVWHHRRVLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAI 511
++ KNY W HR+ +++ + EL+ L +D +N W R + I
Sbjct: 191 DILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVI 244
>BT009854-1|AAP88856.1| 379|Homo sapiens farnesyltransferase, CAAX
box, alpha protein.
Length = 379
Score = 258 bits (632), Expect = 1e-68
Identities = 109/172 (63%), Positives = 137/172 (79%)
Frame = +2
Query: 68 WIPYKERPEWSDVTPVPEDDGPNPVVVIAHSEKFEDVYDYFRAVLQSNEKSERVLHLTKD 247
++ Y++R EW+D+ PVP++DGPNPVV I +S+KF DVYDYFRAVLQ +E+SER LT+D
Sbjct: 63 YVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRD 122
Query: 248 ALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRRVLVEWLQDP 427
A+ELN ANYTVW +RR LLK L DL E++Y+ A+I+ PKNYQVWHHRRVLVEWL+DP
Sbjct: 123 AIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDP 182
Query: 428 TMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVRNN 583
+ ELE D L QD KNYHAWQHRQW I+ F L++ EL +VD L+ +DVRNN
Sbjct: 183 SQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN 234
Score = 62.9 bits (146), Expect = 8e-10
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Frame = +2
Query: 176 VYDYFRAVLQSNEKS--ERVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVE 349
V+ + R +L+S +K E + ++T +E P NY VW +RR L++ L D EL+++
Sbjct: 133 VWHFRRVLLKSLQKDLHEEMNYITA-IIEEQPKNYQVWHHRRVLVEWLR-DPSQELEFIA 190
Query: 350 AVIKNSPKNYQVWHHRRVLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAI 511
++ KNY W HR+ +++ + EL+ L +D +N W R + I
Sbjct: 191 DILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVI 244
>BC084566-1|AAH84566.1| 379|Homo sapiens farnesyltransferase, CAAX
box, alpha protein.
Length = 379
Score = 258 bits (632), Expect = 1e-68
Identities = 109/172 (63%), Positives = 137/172 (79%)
Frame = +2
Query: 68 WIPYKERPEWSDVTPVPEDDGPNPVVVIAHSEKFEDVYDYFRAVLQSNEKSERVLHLTKD 247
++ Y++R EW+D+ PVP++DGPNPVV I +S+KF DVYDYFRAVLQ +E+SER LT+D
Sbjct: 63 YVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRD 122
Query: 248 ALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRRVLVEWLQDP 427
A+ELN ANYTVW +RR LLK L DL E++Y+ A+I+ PKNYQVWHHRRVLVEWL+DP
Sbjct: 123 AIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDP 182
Query: 428 TMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVRNN 583
+ ELE D L QD KNYHAWQHRQW I+ F L++ EL +VD L+ +DVRNN
Sbjct: 183 SQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN 234
Score = 62.9 bits (146), Expect = 8e-10
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Frame = +2
Query: 176 VYDYFRAVLQSNEKS--ERVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVE 349
V+ + R +L+S +K E + ++T +E P NY VW +RR L++ L D EL+++
Sbjct: 133 VWHFRRVLLKSLQKDLHEEMNYITA-IIEEQPKNYQVWHHRRVLVEWLR-DPSQELEFIA 190
Query: 350 AVIKNSPKNYQVWHHRRVLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAI 511
++ KNY W HR+ +++ + EL+ L +D +N W R + I
Sbjct: 191 DILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVI 244
>BC017029-1|AAH17029.2| 376|Homo sapiens FNTA protein protein.
Length = 376
Score = 258 bits (632), Expect = 1e-68
Identities = 109/172 (63%), Positives = 137/172 (79%)
Frame = +2
Query: 68 WIPYKERPEWSDVTPVPEDDGPNPVVVIAHSEKFEDVYDYFRAVLQSNEKSERVLHLTKD 247
++ Y++R EW+D+ PVP++DGPNPVV I +S+KF DVYDYFRAVLQ +E+SER LT+D
Sbjct: 60 YVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRD 119
Query: 248 ALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRRVLVEWLQDP 427
A+ELN ANYTVW +RR LLK L DL E++Y+ A+I+ PKNYQVWHHRRVLVEWL+DP
Sbjct: 120 AIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDP 179
Query: 428 TMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVRNN 583
+ ELE D L QD KNYHAWQHRQW I+ F L++ EL +VD L+ +DVRNN
Sbjct: 180 SQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN 231
Score = 62.9 bits (146), Expect = 8e-10
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Frame = +2
Query: 176 VYDYFRAVLQSNEKS--ERVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVE 349
V+ + R +L+S +K E + ++T +E P NY VW +RR L++ L D EL+++
Sbjct: 130 VWHFRRVLLKSLQKDLHEEMNYITA-IIEEQPKNYQVWHHRRVLVEWLR-DPSQELEFIA 187
Query: 350 AVIKNSPKNYQVWHHRRVLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAI 511
++ KNY W HR+ +++ + EL+ L +D +N W R + I
Sbjct: 188 DILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVI 241
>BC037295-1|AAH37295.1| 214|Homo sapiens FNTA protein protein.
Length = 214
Score = 208 bits (509), Expect = 8e-54
Identities = 90/137 (65%), Positives = 108/137 (78%)
Frame = +2
Query: 173 DVYDYFRAVLQSNEKSERVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEA 352
DVYDYFRAVLQ +E+SER LT+DA+ELN ANYTVW +RR LLK L DL E++Y+ A
Sbjct: 7 DVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITA 66
Query: 353 VIKNSPKNYQVWHHRRVLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYE 532
+I+ PKNYQVWHHRRVLVEWL+DP+ ELE D L QD KNYHAWQHRQW I+ F L++
Sbjct: 67 IIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWD 126
Query: 533 KELDFVDNLITDDVRNN 583
EL +VD L+ +DVRNN
Sbjct: 127 NELQYVDQLLKEDVRNN 143
Score = 62.9 bits (146), Expect = 8e-10
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Frame = +2
Query: 176 VYDYFRAVLQSNEKS--ERVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVE 349
V+ + R +L+S +K E + ++T +E P NY VW +RR L++ L D EL+++
Sbjct: 42 VWHFRRVLLKSLQKDLHEEMNYITA-IIEEQPKNYQVWHHRRVLVEWLR-DPSQELEFIA 99
Query: 350 AVIKNSPKNYQVWHHRRVLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAI 511
++ KNY W HR+ +++ + EL+ L +D +N W R + I
Sbjct: 100 DILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVI 153
Score = 40.7 bits (91), Expect = 0.004
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = +2
Query: 146 VIAHSEKFEDVYDYFRAVLQSNEKSERVLHLTKDALELNPANYTVWQYRRDLLKHLNTDL 325
+I K V+ + R +++ + L D L + NY WQ+R+ +++
Sbjct: 67 IIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKL-W 125
Query: 326 RTELDYVEAVIKNSPKNYQVWHHRRVLV 409
EL YV+ ++K +N VW+ R ++
Sbjct: 126 DNELQYVDQLLKEDVRNNSVWNQRYFVI 153
>Y08200-1|CAA69382.1| 567|Homo sapiens rab geranylgeranyl
transferase protein.
Length = 567
Score = 82.2 bits (194), Expect = 1e-15
Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Frame = +2
Query: 203 QSNEKSERVLHLTKDALELNPANYTVWQYRRDLLKHLNTD---------LRTELDYVEAV 355
Q+ E E VL LT L NP T+W RR++L+ L T ++ EL ++E+
Sbjct: 40 QAGELDESVLELTSQILGANPDFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESC 99
Query: 356 IKNSPKNYQVWHHRRVLVEWLQDP--TMELELTGDALLQDPKNYHAWQHRQW-AIKTFGL 526
++ +PK+Y WHHR L+ L +P T ELEL L D +N+H W +R++ A +
Sbjct: 100 LRVNPKSYGTWHHRCWLLGRLPEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVP 159
Query: 527 YEKELDFVDNLITDDVRN 580
+EL F D+LIT + N
Sbjct: 160 PAEELAFTDSLITRNFSN 177
Score = 48.4 bits (110), Expect = 2e-05
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Frame = +2
Query: 224 RVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRRV 403
R L L LE++ N+ W YRR + EL + +++I + NY WH+R
Sbjct: 127 RELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSSWHYRSC 186
Query: 404 LVEWL-------------QDPTM-ELELTGDALLQDPKNYHAWQHRQWAI 511
L+ L +D + ELEL +A DP + AW + +W +
Sbjct: 187 LLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>CR541797-1|CAG46596.1| 567|Homo sapiens RABGGTA protein.
Length = 567
Score = 82.2 bits (194), Expect = 1e-15
Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Frame = +2
Query: 203 QSNEKSERVLHLTKDALELNPANYTVWQYRRDLLKHLNTD---------LRTELDYVEAV 355
Q+ E E VL LT L NP T+W RR++L+ L T ++ EL ++E+
Sbjct: 40 QAGELDESVLELTSQILGANPDFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESC 99
Query: 356 IKNSPKNYQVWHHRRVLVEWLQDP--TMELELTGDALLQDPKNYHAWQHRQW-AIKTFGL 526
++ +PK+Y WHHR L+ L +P T ELEL L D +N+H W +R++ A +
Sbjct: 100 LRVNPKSYGTWHHRCWLLGRLPEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVP 159
Query: 527 YEKELDFVDNLITDDVRN 580
+EL F D+LIT + N
Sbjct: 160 PAEELAFTDSLITRNFSN 177
Score = 48.4 bits (110), Expect = 2e-05
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Frame = +2
Query: 224 RVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRRV 403
R L L LE++ N+ W YRR + EL + +++I + NY WH+R
Sbjct: 127 RELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSSWHYRSC 186
Query: 404 LVEWL-------------QDPTM-ELELTGDALLQDPKNYHAWQHRQWAI 511
L+ L +D + ELEL +A DP + AW + +W +
Sbjct: 187 LLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>BC003093-1|AAH03093.1| 567|Homo sapiens Rab
geranylgeranyltransferase, alpha subunit protein.
Length = 567
Score = 82.2 bits (194), Expect = 1e-15
Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Frame = +2
Query: 203 QSNEKSERVLHLTKDALELNPANYTVWQYRRDLLKHLNTD---------LRTELDYVEAV 355
Q+ E E VL LT L NP T+W RR++L+ L T ++ EL ++E+
Sbjct: 40 QAGELDESVLELTSQILGANPDFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESC 99
Query: 356 IKNSPKNYQVWHHRRVLVEWLQDP--TMELELTGDALLQDPKNYHAWQHRQW-AIKTFGL 526
++ +PK+Y WHHR L+ L +P T ELEL L D +N+H W +R++ A +
Sbjct: 100 LRVNPKSYGTWHHRCWLLGRLPEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVP 159
Query: 527 YEKELDFVDNLITDDVRN 580
+EL F D+LIT + N
Sbjct: 160 PAEELAFTDSLITRNFSN 177
Score = 48.4 bits (110), Expect = 2e-05
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Frame = +2
Query: 224 RVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRRV 403
R L L LE++ N+ W YRR + EL + +++I + NY WH+R
Sbjct: 127 RELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSSWHYRSC 186
Query: 404 LVEWL-------------QDPTM-ELELTGDALLQDPKNYHAWQHRQWAI 511
L+ L +D + ELEL +A DP + AW + +W +
Sbjct: 187 LLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>BC053622-1|AAH53622.1| 403|Homo sapiens PTAR1 protein protein.
Length = 403
Score = 43.6 bits (98), Expect = 5e-04
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 24/122 (19%)
Frame = +2
Query: 221 ERVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRR 400
+ ++ +T L LNP T W R++L+ + +L + + PK+ + W HRR
Sbjct: 86 DELIDVTCTLLLLNPDFTTAWNVRKELILSGTLNPIKDLHLGKLALTKFPKSPETWIHRR 145
Query: 401 -VLVEWLQDPTM-----------------------ELELTGDALLQDPKNYHAWQHRQWA 508
VL + +Q+ ++ E+E+ G+A + P NY+AW HR W
Sbjct: 146 WVLQQLIQETSLPSFVTKGNLGTIPTERAQRLIQEEMEVCGEAAGRYPSNYNAWSHRIWV 205
Query: 509 IK 514
++
Sbjct: 206 LQ 207
>AL162412-2|CAI10945.2| 312|Homo sapiens protein prenyltransferase
alpha subunit repeat containing 1 protein.
Length = 312
Score = 43.6 bits (98), Expect = 5e-04
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 24/122 (19%)
Frame = +2
Query: 221 ERVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRR 400
+ ++ +T L LNP T W R++L+ + +L + + PK+ + W HRR
Sbjct: 85 DELIDVTCTLLLLNPDFTTAWNVRKELILSGTLNPIKDLHLGKLALTKFPKSPETWIHRR 144
Query: 401 -VLVEWLQDPTM-----------------------ELELTGDALLQDPKNYHAWQHRQWA 508
VL + +Q+ ++ E+E+ G+A + P NY+AW HR W
Sbjct: 145 WVLQQLIQETSLPSFVTKGNLGTIPTERAQRLIQEEMEVCGEAAGRYPSNYNAWSHRIWV 204
Query: 509 IK 514
++
Sbjct: 205 LQ 206
>AL162412-1|CAI10944.1| 350|Homo sapiens protein prenyltransferase
alpha subunit repeat containing 1 protein.
Length = 350
Score = 39.1 bits (87), Expect = 0.011
Identities = 30/95 (31%), Positives = 46/95 (48%)
Frame = +2
Query: 230 LHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRRVLV 409
LHL K AL P + W +RR +L+ L + T L V K + +R++
Sbjct: 44 LHLGKLALTKFPKSPETWIHRRWVLQQLIQE--TSLP--SFVTKGNLGTIPTERAQRLIQ 99
Query: 410 EWLQDPTMELELTGDALLQDPKNYHAWQHRQWAIK 514
E E+E+ G+A + P NY+AW HR W ++
Sbjct: 100 E-------EMEVCGEAAGRYPSNYNAWSHRIWVLQ 127
Score = 30.7 bits (66), Expect = 4.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 389 HHRRVLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAIK 514
H + +++ +P +L L AL + PK+ W HR+W ++
Sbjct: 28 HMKELILSGTLNPIKDLHLGKLALTKFPKSPETWIHRRWVLQ 69
>X03145-5|CAA26919.1| 152|Homo sapiens protein ( Human KpnI
repetitive sequence (T-betaG41) 3kb downstream of
beta-globin gene. ).
Length = 152
Score = 29.5 bits (63), Expect = 9.1
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 212 EKSERVLHLTKDALELNPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQ 382
EK E++LH D + P +VWQ+ R N +L D ++ PK+Y+
Sbjct: 25 EKQEQLLHCWWDCKLVQPLRKSVWQFLR------NLELEIPFDPAIPLLGRYPKDYK 75
>AF180681-1|AAF36817.1| 1544|Homo sapiens guanine nucleotide exchange
factor protein.
Length = 1544
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 236 LTKDALEL-NPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRRVL 406
LTK L L N A YT W R+ +K R L+YV +K + ++ ++R L
Sbjct: 937 LTKYPLLLDNIAKYTEWPTEREKVKKAADHCRQILNYVNQAVKEAENKQRLEDYQRRL 994
>AB002380-1|BAA20836.2| 1443|Homo sapiens KIAA0382 protein protein.
Length = 1443
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 236 LTKDALEL-NPANYTVWQYRRDLLKHLNTDLRTELDYVEAVIKNSPKNYQVWHHRRVL 406
LTK L L N A YT W R+ +K R L+YV +K + ++ ++R L
Sbjct: 836 LTKYPLLLDNIAKYTEWPTEREKVKKAADHCRQILNYVNQAVKEAENKQRLEDYQRRL 893
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,834,553
Number of Sequences: 237096
Number of extensions: 2060981
Number of successful extensions: 4151
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4085
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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