Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5k12
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.           161   1e-41
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    72   1e-14
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    35   0.002
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   6.4  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score =  161 bits (392), Expect = 1e-41
 Identities = 75/166 (45%), Positives = 106/166 (63%)
 Frame = +2

Query: 149 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQE 328
           FKL+L+G+S VGKS L+LRF    + E   STIG  F  +T+ ++  T+K +IWDTAGQE
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84

Query: 329 RFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTK 508
           R+ ++   YYRGA   I+VYD  + DSF+  K W++E+ R A  N+   L GNK DL   
Sbjct: 85  RYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANS 144

Query: 509 KVVDFSTAKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVG 646
           +VVD+  AKQYA+   + F+ETSAK + NV   F+ +A ++    G
Sbjct: 145 RVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKKLPKNEG 190


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 72.1 bits (169), Expect = 1e-14
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
 Frame = +2

Query: 152 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQER 331
           K +++GD  VGK+C+L+ +  D++   Y+ T   ++    V ++G  + L +WDTAGQE 
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQED 66

Query: 332 FRTITSSYYRGAHGIIIVYDCTDQDSFSNV-KQWLEEIDRYACDNVNKLLVGNKCDL 499
           +  +    Y      +I Y      SF NV  +W  EI ++ C +   +LVG K DL
Sbjct: 67  YDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEI-KHHCPDAPIILVGTKIDL 122


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 35.1 bits (77), Expect = 0.002
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +2

Query: 314 TAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYACDNVNKLLVGNK 490
           +AGQE +  +    Y      ++ +      SF NVK+ W+ EI  + C     LLVG +
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-CQKTPFLLVGTQ 59

Query: 491 CDL 499
            DL
Sbjct: 60  IDL 62


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 389 DCTDQDSFSNVKQWLEEI 442
           D T Q  + N+K+WL+ +
Sbjct: 329 DTTGQQFYDNIKRWLDVV 346


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,362
Number of Sequences: 2352
Number of extensions: 11516
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)