Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5k10
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 39 8e-04
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 37 0.002
SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter |Schizosa... 32 0.065
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 32 0.086
SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr... 31 0.11
SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|c... 29 0.46
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 29 0.61
SPAC1039.04 |||nicotinic acid plasma membrane transporter |Schiz... 29 0.81
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 28 1.1
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 27 3.3
SPAC630.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.3
SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa... 26 4.3
SPBC18H10.15 |ppk23||serine/threonine protein kinase Ppk23|Schiz... 26 5.7
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 25 9.9
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 38.7 bits (86), Expect = 8e-04
Identities = 32/155 (20%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Frame = +3
Query: 177 LFLAMVLAYGMRVNISMAIVAMTDKDN---EDSFNWSMQTQSVILSSFFWGYVVLQIPGG 347
L++ L+ +R +S++ T + + + +S ++ L+ F+ GY++ ++P
Sbjct: 89 LWILYFLSCCLRFTVSLSFTMNTAQGHSLIQTLSGYSAHYLALGLALFYVGYIIFEVPSN 148
Query: 348 ELAAKFGGKILVI-ISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQGLSQGFTYPSIHNL 524
+ A +I V I L + V + L +G Q+ A R G+++ +P +
Sbjct: 149 LMMAFIEPRIWVSRIQLTIGVVGACHAVLGTKHGNAQSYVALRFFLGVAESGLWPGLAYY 208
Query: 525 IGKWVPLEE-KSRLGTIIYAGGQLGTALQLMASGF 626
+ +W + R+G A A+ L+++GF
Sbjct: 209 MSRWYRGKHLGKRIGWYYTAAQIAAAAVSLVSAGF 243
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 37.1 bits (82), Expect = 0.002
Identities = 25/90 (27%), Positives = 43/90 (47%)
Frame = +3
Query: 309 FFWGYVVLQIPGGELAAKFGGKILVIISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQGL 488
F+ G+V+ QIPG L +F V S + +++ + + AAY + + A R GL
Sbjct: 133 FYVGFVIGQIPGHMLLQRFPVSKFVAASTALWTII-IFLHCAAY--NFSGLMALRFFLGL 189
Query: 489 SQGFTYPSIHNLIGKWVPLEEKSRLGTIIY 578
+ P++ IG + P E++ L Y
Sbjct: 190 VESSLLPTMEATIGMFFPHSEQALLQPFFY 219
>SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 32.3 bits (70), Expect = 0.065
Identities = 19/97 (19%), Positives = 41/97 (42%)
Frame = +3
Query: 309 FFWGYVVLQIPGGELAAKFGGKILVIISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQGL 488
F GY++ Q+PG + ++ + +N + ++ + +A+ R +
Sbjct: 76 FTCGYIIGQLPGSYALQRVPARLWFSV---MNILWGLMTIFSFAVHSVRALMILRFFMAV 132
Query: 489 SQGFTYPSIHNLIGKWVPLEEKSRLGTIIYAGGQLGT 599
++ T+ H ++G W E + I A G +GT
Sbjct: 133 AEASTFAGTHYILGAWYKESELCKRAGIFSASGLVGT 169
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 570
Score = 31.9 bits (69), Expect = 0.086
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +3
Query: 309 FFWGYVVLQIPGGELAAKFG-GKILVIISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQG 485
F+ GY+V Q PG + F GK + +++ SV+ L A YGG + A R G
Sbjct: 146 FYVGYIVGQFPGHYIMQTFPLGKFVGLVTFSW-SVIVFLHCCAYNYGG---LIALRFFLG 201
Query: 486 LSQGFTYPSIHNLIGKWVPLEEKSRLGTIIY 578
++ P++ +G + +E++ L + +
Sbjct: 202 FTESCLLPAMEATMGMFFTHQEQAFLQPVFW 232
>SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 508
Score = 31.5 bits (68), Expect = 0.11
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +3
Query: 303 SSFFWGYVVLQIPGGELAAKFGGKILVIISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQ 482
++F+ GY+V + P L +F + + L + + + +A Y G A RVL
Sbjct: 107 TAFYLGYLVFEFPASLLLQRFPLSKTLCVFLVIWGFLLCMTSVANYPG----FIALRVLL 162
Query: 483 GLSQGFTYPSIHNLIGKWVPLEEKSRLGTIIYAGGQLGTAL-QLMASG 623
G+ + P L +W E+ ++ A LG L MA G
Sbjct: 163 GMMESAASPGFILLTAQWYKRSEQQLRTSVWVAFNGLGQILGSCMAYG 210
>SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 29.5 bits (63), Expect = 0.46
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 345 GELAAKFGGKILVIISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQGLSQGFTYPSIHNL 524
G L +G K + ++ + S++ + Y CR L G++ F P+ L
Sbjct: 103 GRLGDIYGHKKMFVLGYIWFCIWSLISGFSYYAKSVIMFDVCRALTGIAPAFLLPNALAL 162
Query: 525 IGK-WVPLEEKSRLGTIIYAGGQLGTALQLMASGFIAQ 635
+G+ + P ++K+ + + A G L + SG AQ
Sbjct: 163 LGRVYPPGKKKNLIFALFGATAPNGFLLGSVFSGIFAQ 200
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 29.1 bits (62), Expect = 0.61
Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Frame = +3
Query: 183 LAMVLAYGMRVNISMAIVAMTDKDNEDSFNWSMQTQ-SVILSSFFWGYVVLQIPGGELAA 359
L +V A+ + ++ ++VA D F+ T+ ++ILS + + + + L+
Sbjct: 48 LILVSAFALLGPMASSMVAPCLDQIADRFHIQNSTEKALILSIYLLVFAISPMISAPLSE 107
Query: 360 KFGGKILVIISLGVNSVVSMLIPLAAYYGGWQA-VCACRVLQGLSQGFTYPSIHNLIGKW 536
FG ++L L V +V+ ++ +A +A + R L G I
Sbjct: 108 VFGRRML----LQVGNVIFIVFNMACGLARTKAQMYIFRFLAGFGSATPMGLGSGTISDL 163
Query: 537 VPLEEKSRLGTIIYAGGQLGTALQLMASGFIAQY 638
+E+ + ++ LG + + SGFIA+Y
Sbjct: 164 FTPDERGKAVAVMSLAPLLGPTIGPVVSGFIAEY 197
>SPAC1039.04 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 28.7 bits (61), Expect = 0.81
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = +3
Query: 291 SVILSSFFWGYVVLQIPGGELAAKFG-GKILVIISLGVNSVVSMLIPLAAYYGGWQAVCA 467
++++S F+ +V+ P L +FG +IL L + +S+ +GG AV
Sbjct: 99 NIMISIFYIPFVLCAFPFSYLYKRFGAARILPFFMLSFGA-MSLCQAAVKNFGGMMAV-- 155
Query: 468 CRVLQGLSQGFTYPSIHNLIGKWVPLEEKSRLGTIIYAGGQLGTAL-QLMASG 623
R G+++ P + + + E +R I YA + +A L+A G
Sbjct: 156 -RWFLGMAESAVLPGVVYYLTTFYRRTELARRLAIFYAAANVSSAFGGLLAYG 207
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 266 GILVVLVGHSNDGHANVDSHSICQHHCQE*HCSLKMPNTQDCIGFF 129
G++V LVG H + H HH H S+ +PNT + I F
Sbjct: 460 GLVVNLVGILAFNHGHNHDHGSHHHHSHSNH-SMCLPNTTNDINIF 504
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 512 HSQPYREMGSSRREKQIGHHYLRWWSTWNGSSTYGIWFHSPVLGAGR 652
HSQP+R+ S++R WNGS + + + SP++ + R
Sbjct: 67 HSQPFRQSPSTQRNLPNQSFDFASNGAWNGSGS--VKYSSPMMPSSR 111
>SPAC630.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 430
Score = 26.2 bits (55), Expect = 4.3
Identities = 20/79 (25%), Positives = 36/79 (45%)
Frame = +3
Query: 273 WSMQTQSVILSSFFWGYVVLQIPGGELAAKFGGKILVIISLGVNSVVSMLIPLAAYYGGW 452
W++ +S IL+ ++L++P AK GK+++ SM +PL G W
Sbjct: 274 WNLCPESSILTK----EILLELPKASDVAKSIGKMIL---------TSMFVPLWLLKGIW 320
Query: 453 QAVCACRVLQGLSQGFTYP 509
+A +++ G T P
Sbjct: 321 EAPATAKIIIGSIADVTLP 339
>SPAC2G11.13 |atg22||autophagy associated protein Atg22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 26.2 bits (55), Expect = 4.3
Identities = 29/115 (25%), Positives = 54/115 (46%)
Frame = +3
Query: 102 SVKEVSNDIKKPDAILGIRHLQTAMLFLAMVLAYGMRVNISMAIVAMTDKDNEDSFNWSM 281
SVKE + K +I IR LF + + G++ ++S A++ + N +F ++
Sbjct: 312 SVKESYHSFKHAMSISSIR----LFLFSRLFINCGIQTSLSSAVIFGKARLNLSNFQLTL 367
Query: 282 QTQSVILSSFFWGYVVLQIPGGELAAKFGGKILVIISLGVNSVVSMLIPLAAYYG 446
+ SSF +L G + + + + SL V ++S+L+P+A YG
Sbjct: 368 LGMGI--SSF----ALL----GTVIIPYLTEYFQLNSLQVVMIISILLPMAPLYG 412
>SPBC18H10.15 |ppk23||serine/threonine protein kinase
Ppk23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 398
Score = 25.8 bits (54), Expect = 5.7
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 568 PLFTLVVNLERLFNLWHLVS*PSTGGWPAIF 660
PLF+ L++L+ +++L+ P+ WP F
Sbjct: 272 PLFSGKSELDQLYKIFNLLGYPTREEWPQYF 302
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 576 YAGGQLGTALQLMASGFIAQY 638
+A LGTAL SGFI QY
Sbjct: 288 FAAYHLGTALGPSLSGFIVQY 308
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,183,729
Number of Sequences: 5004
Number of extensions: 72657
Number of successful extensions: 195
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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