Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5k06
(566 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 119 2e-27
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 116 1e-26
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 50 1e-06
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 49 3e-06
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 48 7e-06
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 47 9e-06
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 41 8e-04
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 39 0.003
03_01_0249 - 1935355-1935827,1936129-1936330 38 0.006
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 36 0.017
02_05_1202 + 34932291-34933027,34933297-34933774 35 0.039
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 32 0.28
11_06_0584 - 25220371-25222917 31 0.85
07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709 31 0.85
10_08_0710 + 20070655-20070990,20071074-20071469 29 2.0
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 2.0
10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111 29 3.4
05_07_0064 + 27440520-27440942,27442387-27442998,27443109-274431... 29 3.4
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 29 3.4
03_05_1139 - 30689514-30689609,30689795-30689956,30691245-306912... 29 3.4
02_04_0633 - 24616563-24617279 29 3.4
01_01_0735 + 5730783-5733320 29 3.4
04_04_0223 - 23723055-23723223,23723316-23723424,23723588-237236... 28 6.0
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 28 6.0
06_01_1205 - 10406603-10406651,10407013-10407476 27 7.9
04_04_0224 - 23738105-23738273,23738364-23738472,23738702-237388... 27 7.9
02_05_0565 + 30010395-30010485,30011604-30011678,30011913-300121... 27 7.9
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 119 bits (286), Expect = 2e-27
Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Frame = +3
Query: 6 PKTPTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKV 185
P P A VL+ N A+KALIAA+Y+G V++ NF G +NK+ +FLK P GK+
Sbjct: 19 PAAPVGMALVLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKI 78
Query: 186 PAFESADGKVLLTESNAIAYYVA----NESLRGGDLATQARVWQWASWSDSELLPASCAW 353
P E+ +G V ESNAIA YVA N SL G L + + QW +S +E+ W
Sbjct: 79 PVLETPEGAVF--ESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSATEVDANIGRW 136
Query: 354 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQ 533
++P LG + E A + L +L L+ HL + T+LV +TLAD+++ L + F
Sbjct: 137 LYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYYGFV 196
Query: 534 HVL 542
+L
Sbjct: 197 RIL 199
>02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 116 bits (280), Expect = 1e-26
Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 13/183 (7%)
Frame = +3
Query: 33 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 212
VL+T+ N A+KALIAA+YSG V++A NF G +NK+ ++LK P GKVP E+ DG
Sbjct: 565 VLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGP 624
Query: 213 VLLTESNAIAYYVANES-------------LRGGDLATQARVWQWASWSDSELLPASCAW 353
V ESNAIA YV + S L G L A + QW +S +E+ + W
Sbjct: 625 VF--ESNAIARYVLSSSHFPEVTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKW 682
Query: 354 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQ 533
+FP LG + + E A + L +L L+ HL + T+LV +TLAD+++ L F
Sbjct: 683 LFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFA 742
Query: 534 HVL 542
++
Sbjct: 743 RIM 745
Score = 110 bits (265), Expect = 7e-25
Identities = 68/183 (37%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Frame = +3
Query: 33 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 212
VL+ N A+KALIAA+YSG V++ NF G +NK+ +FLK P GK+P E+ DG
Sbjct: 4 VLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGP 63
Query: 213 VLLTESNAIAYYV-------------ANESLRGGDLATQARVWQWASWSDSELLPASCAW 353
V ESNAIA YV A+ L G L A + QW +S +E+ W
Sbjct: 64 VF--ESNAIARYVLSHCHFPEVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKW 121
Query: 354 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQ 533
++P LGI + + E A + L +L L+ HL + T+LV +TLAD+++ L F
Sbjct: 122 LYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFA 181
Query: 534 HVL 542
++
Sbjct: 182 RIM 184
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 50.4 bits (115), Expect = 1e-06
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Frame = +3
Query: 21 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 200
MA +Y + + L+ + G + +V P + +K + + P G+VPAFE
Sbjct: 1 MAPAKVYGPAMSTNVMRILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE- 59
Query: 201 ADGKVLLTESNAIAYYV----ANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYL 368
DG + L ES AI+ Y+ ++ LR +L+ A V W S A +F
Sbjct: 60 -DGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLEVESSHFDGAMSPIIFQCF 118
Query: 369 GIMQF-----NKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLH 524
+ F + V + L AL+V + L +L + I+LAD+ F T+ +
Sbjct: 119 IVPMFMGGATDIGVVNESLEKLKKALEVYEAQLSKSKYLAGDFISLADISHFPTVYY 175
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 48.8 bits (111), Expect = 3e-06
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Frame = +3
Query: 69 KALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 245
+ L+ + G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA
Sbjct: 17 RVLVCLEEVGADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAK 73
Query: 246 YVAN-------ESLRGGDLATQARVWQWASWSDSELLPA------SCAWVFPYLGIMQFN 386
Y+ + LR D+ A V W + PA C +FP + + N
Sbjct: 74 YILRKYKSSKVDLLRESDIREAALVDVWTEVEAHQYYPALSPIVFECI-IFPIMRGVPTN 132
Query: 387 KQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADV 500
+Q V + L L+ + L +L + ++ AD+
Sbjct: 133 QQVVHESLEKLKKVLETYEARLSGSRYLAGDFLSFADL 170
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 47.6 bits (108), Expect = 7e-06
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 10/152 (6%)
Frame = +3
Query: 96 GTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANE-SLRG 272
G D + P + +K FL P G++P + DG +L ES AI Y+A + G
Sbjct: 30 GLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQ--DGDEVLYESRAINRYIATKYKAEG 87
Query: 273 GDL----ATQARVWQWASWSDSELLPASCAWVF-----PYLGIMQFNKQNVERAKSDLLA 425
DL A+ A++ W PA VF P LG + V+ + L
Sbjct: 88 ADLLPAEASPAKLEVWLEVESHHFYPAISGLVFQLLIKPLLGGAT-DTAAVDEHAAALAQ 146
Query: 426 ALKVLDGHLLTRTFLVTERITLADVIVFSTLL 521
L V D HL +L R +LAD S LL
Sbjct: 147 VLDVYDAHLAGSRYLAGNRFSLADANHMSYLL 178
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 47.2 bits (107), Expect = 9e-06
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Frame = +3
Query: 75 LIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 251
L+ + +G + VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 18 LVCLEEAGASYELVAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYV 74
Query: 252 AN-----ESLRGGDLATQARVWQWASWSDSELLPA------SCAWVFPYLGIMQFNKQNV 398
+ LR G+L A V W PA C + P +G ++ V
Sbjct: 75 LRNYNKPDLLREGNLEESAMVDMWMEVEAHHYDPAIFHIIRECV-IKPMIGGGARDQAIV 133
Query: 399 ERAKSDLLAALKVLDGHLLTRTFLVTERITLADV 500
+ L L+V + L +L + +++AD+
Sbjct: 134 DENVEKLRKVLEVYERRLSESEYLAGDFVSVADL 167
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 40.7 bits (91), Expect = 8e-04
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Frame = +3
Query: 69 KALIAAQYSGTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 245
+ L+ + G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI
Sbjct: 17 RVLLCLEEVGADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICR 73
Query: 246 YVANES--------LRGGDLATQARVWQWASWSDSELLPASCA-----WVFPYLGIMQFN 386
Y+ + LR GD + A V W P+ A V P LG + +
Sbjct: 74 YILRKHRATDEANLLREGDPSESAVVDAWLDVEALRYEPSVHAVFVQRRVVPALG-GEPD 132
Query: 387 KQNVERAKSDLLAALKVLDGHL-LTRTFLVTERITLADVIVF 509
++ + + + L L V + L TR +L ++LAD+ F
Sbjct: 133 ERVIAESVARLRETLAVYEARLEATRGYLAGGEVSLADLSHF 174
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = +3
Query: 411 SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTL 518
S+ AA LDG+L +RTFLV+ +++AD++V+S L
Sbjct: 93 SEFEAACSFLDGYLASRTFLVSYGLSIADIVVWSNL 128
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 37.9 bits (84), Expect = 0.006
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Frame = +3
Query: 141 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV-------ANESLRG---GDLATQ 290
+KS FLK P G+VPAF+ D + ES AI Y+ N++L G +
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGNKTLMGRKEDGAVGR 99
Query: 291 ARVWQWASWSDSELLPASCAWVF-----PYLGIMQFNKQNVERAKSDLLAALKVLDGHLL 455
A + +W P S A F P++G + VE+ ++ L+ L V + L
Sbjct: 100 AAIEKWIEAEGQSFNPPSLAMAFQLAFAPFMG-RATDMAVVEQNEAKLVKVLDVYEQWLG 158
Query: 456 TRTFLVTERITLADVI 503
+ + +LAD++
Sbjct: 159 ENQYFAGDEFSLADLV 174
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 411 SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTL 518
S+ A +DG+L++RTFLV +T+AD+ V+S L
Sbjct: 91 SEFEVACSFVDGYLMSRTFLVGHVLTIADITVWSNL 126
>02_05_1202 + 34932291-34933027,34933297-34933774
Length = 404
Score = 35.1 bits (77), Expect = 0.039
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 384 NKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLL 521
+++ + A +L AAL L+ HL +L + +TLADV +F+TL+
Sbjct: 252 SQEAYDAAAGELFAALDRLEDHLSGSRYLCGDTLTLADVCLFTTLV 297
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 32.3 bits (70), Expect = 0.28
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 36 LYTYPENFRAYKALIAAQYSGTDVKV-APNFVFGETNKSEDFLKKFPAGKVPAFESADGK 212
LY+Y + +++ IA G + + A N + GE + E F+K P VPA DG
Sbjct: 16 LYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPE-FMKVNPMKFVPAL--VDGD 72
Query: 213 VLLTESNAIAYYVANE 260
++ +S AIA Y+ ++
Sbjct: 73 AVIGDSYAIALYLEDK 88
>11_06_0584 - 25220371-25222917
Length = 848
Score = 30.7 bits (66), Expect = 0.85
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -2
Query: 481 LSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 317
+++ + R R P + R + +ST C C +PR K +AG S+++D
Sbjct: 386 INIRKTARRRELPQKQHQHKLR--WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709
Length = 191
Score = 30.7 bits (66), Expect = 0.85
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +3
Query: 399 ERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIV--FSTLLHAF-QHV 539
E AK++LL L+ L+G L R+F + D+++ FS++ H + QH+
Sbjct: 110 EMAKAELLDQLRRLEGVLGDRSFFSGDEFGFLDIVLIPFSSMFHGYKQHM 159
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 29.5 bits (63), Expect = 2.0
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +3
Query: 141 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV------ANESLRGGDLATQARVW 302
NKSE L P K +GK + ES I YV A ESL D +A
Sbjct: 45 NKSELLLSSNPVHKKVPVLIHNGKPIC-ESQIIVEYVDEAFPDAGESLLPSDPYDRAVAR 103
Query: 303 QWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLD 443
WA++ + + +P AW LG+ + K A +LAA++ L+
Sbjct: 104 FWAAYINDKFMP---AWQKASLGLTEEEK---AEAVKQMLAAIENLE 144
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 29.5 bits (63), Expect = 2.0
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Frame = +3
Query: 156 FLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELL 335
FLK P GKVP F DGK + +S+ I V E L T ++AS S++
Sbjct: 49 FLKISPEGKVPVFNGGDGK-WIPDSDVIT-QVIEEKYPTPSLVTPP---EYAS-VGSKIF 102
Query: 336 PASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTR-TFLVTERITLADVIVFS 512
SC F +K + ++ LL L+ L+ HL F+ + I+ AD+ +
Sbjct: 103 --SCFTTF------LKSKDPNDGSEKALLTELQALEEHLKAHGPFINGQNISAADLSLAP 154
Query: 513 TLLH 524
L H
Sbjct: 155 KLYH 158
>10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111
Length = 553
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 454 SHAPSLLPRESHLPMSLSS 510
+H PSL+P ESHL S+SS
Sbjct: 498 NHQPSLVPNESHLNNSVSS 516
>05_07_0064 +
27440520-27440942,27442387-27442998,27443109-27443175,
27443271-27443362,27443493-27443708,27443869-27444006,
27444325-27444474
Length = 565
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/84 (25%), Positives = 38/84 (45%)
Frame = +3
Query: 297 VWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVT 476
V +W + +LP A L ++ K+ V+R KS L A G+L+ + F +
Sbjct: 411 VARWGNLIGYIVLPFRIAMFHDPLEYIRQGKRTVDRKKSSLEAIFTYWSGNLIVKLFGIK 470
Query: 477 ERITLADVIVFSTLLHAFQHVLXP 548
L ++ +T L +F ++ P
Sbjct: 471 TAAALCHGMLANTTL-SFSSMVGP 493
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -2
Query: 517 SVLKTMTSASVILSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEA 338
S + M +A V + +K RVR PSST ++A+RS C + + + A+
Sbjct: 410 SAVDRMVNA-VKVEPKKKARVRPSPSSTLRSANRSTAGTLVVCPASVLRQWASELAAKVT 468
Query: 337 GSSSLS 320
SS LS
Sbjct: 469 ESSKLS 474
>03_05_1139 -
30689514-30689609,30689795-30689956,30691245-30691299,
30691695-30691959,30692749-30692959,30693542-30693721,
30693802-30693899,30694211-30694277,30694897-30694963,
30695335-30695447,30695988-30696032,30696116-30696223,
30696582-30696791,30697464-30697670,30697786-30697875,
30698168-30698389
Length = 731
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/70 (18%), Positives = 34/70 (48%)
Frame = -3
Query: 213 PFHRHFRMQALFRQETSSRSLRTCWSRQIRNSVLLSHQSRNIVRRSTLYKRGSFPDKCKV 34
PF + + R++T + R + + +S++++ ++RR Y + PD +
Sbjct: 665 PFGHDQTQERILREDTIINARRV----EFPSKPAVSNEAKELIRRCLTYNQAERPDVLTI 720
Query: 33 PRPPWLEFSE 4
+ P+L +++
Sbjct: 721 AQEPYLSYAK 730
>02_04_0633 - 24616563-24617279
Length = 238
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 232 MPSLTTLPMKVSAEEIWLPKPVSGSGHHGLTANYC 336
MP+ TT+ M+ S + W P+ G HG+ N+C
Sbjct: 1 MPAATTIQMEASPADHWSPRHRRRCGCHGV--NWC 33
>01_01_0735 + 5730783-5733320
Length = 845
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 116 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKGA 217
T F +W D + + +E SC+K C+ C K A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>04_04_0223 -
23723055-23723223,23723316-23723424,23723588-23723690,
23723781-23723812,23724024-23724241,23724322-23724437,
23725055-23725310,23725719-23725806,23725928-23726005,
23726199-23726274,23726525-23726583,23727715-23728066
Length = 551
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +3
Query: 6 PKTPTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKS 149
P P A+ LY YP+ FR + Y V + N V NK+
Sbjct: 421 PIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKT 468
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -2
Query: 403 RSTFCLLNCMIPR*GKTQAQEAGSSSLSDHDAHCQTRAWV 284
R T C NC+I + T Q + + C+T WV
Sbjct: 470 RKTICRTNCLICKGTSTSEQNSEDENPDSSRTACETPKWV 509
>06_01_1205 - 10406603-10406651,10407013-10407476
Length = 170
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 343 PALGSSLTLVSCNSTNRMLN 402
PALG + T+V C+ST LN
Sbjct: 113 PALGKATTVVMCSSTKHALN 132
>04_04_0224 -
23738105-23738273,23738364-23738472,23738702-23738804,
23738895-23738926,23739342-23739592,23739639-23739754,
23740271-23740526,23740760-23740847,23740985-23741062,
23741238-23741313,23741532-23741590,23742639-23742711
Length = 469
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +3
Query: 6 PKTPTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKS 149
P P A+ LY YP+ FR + Y + + N V NK+
Sbjct: 339 PIGPQAASPWLYIYPQGFRELVLYVKENYGNPTIYITENGVDEFNNKT 386
>02_05_0565 +
30010395-30010485,30011604-30011678,30011913-30012138,
30014432-30014649,30015170-30015303,30015424-30015675,
30016009-30016416
Length = 467
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 493 ASVILSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNC 377
ASV+L + +R S T + ASR+ A +TF L C
Sbjct: 241 ASVLLEIEDTLRSPPPESETMRTASRASIAVTTFFYLCC 279
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,326,045
Number of Sequences: 37544
Number of extensions: 389632
Number of successful extensions: 1135
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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