Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5j16
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    25   1.3  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   1.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.3  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   3.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.3  

>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = +2

Query: 170 PTVKQNAAKIRVKRLELDENLLMYFRKEEFYYCHDSEKICKTGDIVLIQALPEKLTKL 343
           P+  Q+   I  K L++D N       +  +   D+     TG +  +   PEK  KL
Sbjct: 292 PSADQDTLSILEKLLKVDRNAAFTMSMDSLFAGVDTTSSGSTGILYCLAKNPEKQEKL 349


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 410 KVSKEQYKEDIERQTELYG 466
           K+SK+Q+K+D+  Q E +G
Sbjct: 336 KLSKDQHKQDLPEQLEPHG 354


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = +2

Query: 260 YYCHDSEKICKTGDIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKED 439
           ++ H   +  K GD V +Q     L  L   EI  V  P+ +   PVT     +  +   
Sbjct: 723 WFAHQLREAVKAGDSVKVQVYIRCLGHLGHPEILNVFEPYLEGKIPVT--HFQRLAFIVA 780

Query: 440 IERQTELYGRL 472
           ++R  E Y RL
Sbjct: 781 LDRLVENYPRL 791


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 383 DITDPVTGKKVSKEQYKEDIER 448
           D++D V G   SKE+ ++++ER
Sbjct: 311 DLSDEVQGDNKSKERAEQELER 332


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 20  FXSPSLNHILFRNIFKIQEYSKTNH 94
           F S     ILF NIF   EYS   H
Sbjct: 230 FSSAHDERILFGNIFDSTEYSDMLH 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,688
Number of Sequences: 2352
Number of extensions: 11498
Number of successful extensions: 61
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)