Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5j16
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              23   1.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.8  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   5.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.7  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 326 EKLTKLITHEIKEVVYPFGDITDPVTGKKVSK 421
           E+ TKL + ++  +V    DIT+  + KK SK
Sbjct: 86  ERTTKLDSEQVNRLVNNCKDITESNSCKKSSK 117


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 155 LGQCVPTVKQNAA 193
           LG C P VKQ AA
Sbjct: 13  LGVCAPNVKQRAA 25


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 100 FLMIRFAVFLYFENI 56
           F++I + +FLYF ++
Sbjct: 16  FILINYFIFLYFNSL 30


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -2

Query: 360 FISWVINLVSFSGNAWIRTMSPVLHIFSESW 268
           F  W   L S +     RTM P  H+   SW
Sbjct: 446 FEQWKSILESGTTTLQTRTMHPYDHLVWNSW 476


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,738
Number of Sequences: 438
Number of extensions: 3508
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)