BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5j10
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U47924-19|AAB51324.1| 299|Homo sapiens B-cell receptor associat... 237 3e-62
BC110322-1|AAI10323.1| 299|Homo sapiens prohibitin 2 protein. 237 3e-62
BC014766-1|AAH14766.1| 299|Homo sapiens prohibitin 2 protein. 237 3e-62
AF178980-1|AAF44345.1| 299|Homo sapiens D-prohibitin protein. 237 3e-62
AF150962-1|AAD38042.1| 299|Homo sapiens repressor of estrogen r... 237 3e-62
AF126021-1|AAF17231.1| 299|Homo sapiens B-cell receptor-associa... 237 3e-62
S85655-1|AAB21614.1| 272|Homo sapiens prohibitin protein. 165 2e-40
L14272-1|AAO18340.1| 272|Homo sapiens prohibitin protein. 165 2e-40
BT007411-1|AAP36079.1| 272|Homo sapiens prohibitin protein. 165 2e-40
BC095460-1|AAH95460.1| 272|Homo sapiens prohibitin protein. 165 2e-40
BC013401-1|AAH13401.1| 272|Homo sapiens prohibitin protein. 165 2e-40
AK223181-1|BAD96901.1| 272|Homo sapiens prohibitin variant prot... 165 2e-40
CR541706-1|CAG46507.1| 272|Homo sapiens PHB protein. 163 5e-40
AY577780-1|AAS88903.1| 272|Homo sapiens prohibitin protein. 161 2e-39
U72511-1|AAC51639.1| 211|Homo sapiens B-cell receptor associate... 145 1e-34
BC005085-1|AAH05085.1| 156|Homo sapiens ZNF607 protein protein. 128 2e-29
BC014228-1|AAH14228.1| 201|Homo sapiens LOC494150 protein protein. 96 8e-20
AY423265-1|AAQ99270.1| 112|Homo sapiens immunoglobulin light ch... 30 7.9
>U47924-19|AAB51324.1| 299|Homo sapiens B-cell receptor associated
protein protein.
Length = 299
Score = 237 bits (579), Expect = 3e-62
Identities = 115/141 (81%), Positives = 127/141 (90%), Gaps = 1/141 (0%)
Frame = +3
Query: 216 QSVFTVEGGHRAIMFNRIGGVQQH-VFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+SVFTVEGGHRAI FNRIGGVQQ + EG+HFRIPWFQYPIIYDIR+RPRKISSPTGSK
Sbjct: 38 ESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSK 97
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQMVNISLRVLSRP+A L +MY++LG DY+E+VLPSI NEVLKSVVAKFNASQLITQR
Sbjct: 98 DLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQR 157
Query: 573 QQVSLLIXRELVERAADFNII 635
QVSLLI REL ERA DF++I
Sbjct: 158 AQVSLLIRRELTERAKDFSLI 178
>BC110322-1|AAI10323.1| 299|Homo sapiens prohibitin 2 protein.
Length = 299
Score = 237 bits (579), Expect = 3e-62
Identities = 115/141 (81%), Positives = 127/141 (90%), Gaps = 1/141 (0%)
Frame = +3
Query: 216 QSVFTVEGGHRAIMFNRIGGVQQH-VFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+SVFTVEGGHRAI FNRIGGVQQ + EG+HFRIPWFQYPIIYDIR+RPRKISSPTGSK
Sbjct: 38 ESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSK 97
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQMVNISLRVLSRP+A L +MY++LG DY+E+VLPSI NEVLKSVVAKFNASQLITQR
Sbjct: 98 DLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQR 157
Query: 573 QQVSLLIXRELVERAADFNII 635
QVSLLI REL ERA DF++I
Sbjct: 158 AQVSLLIRRELTERAKDFSLI 178
>BC014766-1|AAH14766.1| 299|Homo sapiens prohibitin 2 protein.
Length = 299
Score = 237 bits (579), Expect = 3e-62
Identities = 115/141 (81%), Positives = 127/141 (90%), Gaps = 1/141 (0%)
Frame = +3
Query: 216 QSVFTVEGGHRAIMFNRIGGVQQH-VFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+SVFTVEGGHRAI FNRIGGVQQ + EG+HFRIPWFQYPIIYDIR+RPRKISSPTGSK
Sbjct: 38 ESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSK 97
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQMVNISLRVLSRP+A L +MY++LG DY+E+VLPSI NEVLKSVVAKFNASQLITQR
Sbjct: 98 DLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQR 157
Query: 573 QQVSLLIXRELVERAADFNII 635
QVSLLI REL ERA DF++I
Sbjct: 158 AQVSLLIRRELTERAKDFSLI 178
>AF178980-1|AAF44345.1| 299|Homo sapiens D-prohibitin protein.
Length = 299
Score = 237 bits (579), Expect = 3e-62
Identities = 115/141 (81%), Positives = 127/141 (90%), Gaps = 1/141 (0%)
Frame = +3
Query: 216 QSVFTVEGGHRAIMFNRIGGVQQH-VFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+SVFTVEGGHRAI FNRIGGVQQ + EG+HFRIPWFQYPIIYDIR+RPRKISSPTGSK
Sbjct: 38 ESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSK 97
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQMVNISLRVLSRP+A L +MY++LG DY+E+VLPSI NEVLKSVVAKFNASQLITQR
Sbjct: 98 DLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQR 157
Query: 573 QQVSLLIXRELVERAADFNII 635
QVSLLI REL ERA DF++I
Sbjct: 158 AQVSLLIRRELTERAKDFSLI 178
>AF150962-1|AAD38042.1| 299|Homo sapiens repressor of estrogen
receptor activity protein.
Length = 299
Score = 237 bits (579), Expect = 3e-62
Identities = 115/141 (81%), Positives = 127/141 (90%), Gaps = 1/141 (0%)
Frame = +3
Query: 216 QSVFTVEGGHRAIMFNRIGGVQQH-VFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+SVFTVEGGHRAI FNRIGGVQQ + EG+HFRIPWFQYPIIYDIR+RPRKISSPTGSK
Sbjct: 38 ESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSK 97
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQMVNISLRVLSRP+A L +MY++LG DY+E+VLPSI NEVLKSVVAKFNASQLITQR
Sbjct: 98 DLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQR 157
Query: 573 QQVSLLIXRELVERAADFNII 635
QVSLLI REL ERA DF++I
Sbjct: 158 AQVSLLIRRELTERAKDFSLI 178
>AF126021-1|AAF17231.1| 299|Homo sapiens B-cell receptor-associated
protein BAP37 protein.
Length = 299
Score = 237 bits (579), Expect = 3e-62
Identities = 115/141 (81%), Positives = 127/141 (90%), Gaps = 1/141 (0%)
Frame = +3
Query: 216 QSVFTVEGGHRAIMFNRIGGVQQH-VFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+SVFTVEGGHRAI FNRIGGVQQ + EG+HFRIPWFQYPIIYDIR+RPRKISSPTGSK
Sbjct: 38 ESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSK 97
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQMVNISLRVLSRP+A L +MY++LG DY+E+VLPSI NEVLKSVVAKFNASQLITQR
Sbjct: 98 DLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQR 157
Query: 573 QQVSLLIXRELVERAADFNII 635
QVSLLI REL ERA DF++I
Sbjct: 158 AQVSLLIRRELTERAKDFSLI 178
>S85655-1|AAB21614.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 165 bits (400), Expect = 2e-40
Identities = 78/141 (55%), Positives = 103/141 (73%)
Frame = +3
Query: 213 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+ +++ V+ GHRA++F+R GVQ V EG HF IPW Q PII+D RSRPR + TGSK
Sbjct: 24 NSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSK 83
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQ VNI+LR+L RP A+ L ++ +G DYDE+VLPSI E+LKSVVA+F+A +LITQR
Sbjct: 84 DLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQR 143
Query: 573 QQVSLLIXRELVERAADFNII 635
+ VS + +L ERAA F +I
Sbjct: 144 ELVSRQVSDDLTERAATFGLI 164
>L14272-1|AAO18340.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 165 bits (400), Expect = 2e-40
Identities = 78/141 (55%), Positives = 103/141 (73%)
Frame = +3
Query: 213 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+ +++ V+ GHRA++F+R GVQ V EG HF IPW Q PII+D RSRPR + TGSK
Sbjct: 24 NSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSK 83
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQ VNI+LR+L RP A+ L ++ +G DYDE+VLPSI E+LKSVVA+F+A +LITQR
Sbjct: 84 DLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQR 143
Query: 573 QQVSLLIXRELVERAADFNII 635
+ VS + +L ERAA F +I
Sbjct: 144 ELVSRQVSDDLTERAATFGLI 164
>BT007411-1|AAP36079.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 165 bits (400), Expect = 2e-40
Identities = 78/141 (55%), Positives = 103/141 (73%)
Frame = +3
Query: 213 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+ +++ V+ GHRA++F+R GVQ V EG HF IPW Q PII+D RSRPR + TGSK
Sbjct: 24 NSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSK 83
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQ VNI+LR+L RP A+ L ++ +G DYDE+VLPSI E+LKSVVA+F+A +LITQR
Sbjct: 84 DLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQR 143
Query: 573 QQVSLLIXRELVERAADFNII 635
+ VS + +L ERAA F +I
Sbjct: 144 ELVSRQVSDDLTERAATFGLI 164
>BC095460-1|AAH95460.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 165 bits (400), Expect = 2e-40
Identities = 78/141 (55%), Positives = 103/141 (73%)
Frame = +3
Query: 213 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+ +++ V+ GHRA++F+R GVQ V EG HF IPW Q PII+D RSRPR + TGSK
Sbjct: 24 NSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSK 83
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQ VNI+LR+L RP A+ L ++ +G DYDE+VLPSI E+LKSVVA+F+A +LITQR
Sbjct: 84 DLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQR 143
Query: 573 QQVSLLIXRELVERAADFNII 635
+ VS + +L ERAA F +I
Sbjct: 144 ELVSRQVSDDLTERAATFGLI 164
>BC013401-1|AAH13401.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 165 bits (400), Expect = 2e-40
Identities = 78/141 (55%), Positives = 103/141 (73%)
Frame = +3
Query: 213 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+ +++ V+ GHRA++F+R GVQ V EG HF IPW Q PII+D RSRPR + TGSK
Sbjct: 24 NSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSK 83
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQ VNI+LR+L RP A+ L ++ +G DYDE+VLPSI E+LKSVVA+F+A +LITQR
Sbjct: 84 DLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQR 143
Query: 573 QQVSLLIXRELVERAADFNII 635
+ VS + +L ERAA F +I
Sbjct: 144 ELVSRQVSDDLTERAATFGLI 164
>AK223181-1|BAD96901.1| 272|Homo sapiens prohibitin variant
protein.
Length = 272
Score = 165 bits (400), Expect = 2e-40
Identities = 78/141 (55%), Positives = 103/141 (73%)
Frame = +3
Query: 213 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+ +++ V+ GHRA++F+R GVQ V EG HF IPW Q PII+D RSRPR + TGSK
Sbjct: 24 NSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSK 83
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQ VNI+LR+L RP A+ L ++ +G DYDE+VLPSI E+LKSVVA+F+A +LITQR
Sbjct: 84 DLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQR 143
Query: 573 QQVSLLIXRELVERAADFNII 635
+ VS + +L ERAA F +I
Sbjct: 144 ELVSRQVSDDLTERAATFGLI 164
>CR541706-1|CAG46507.1| 272|Homo sapiens PHB protein.
Length = 272
Score = 163 bits (396), Expect = 5e-40
Identities = 77/141 (54%), Positives = 102/141 (72%)
Frame = +3
Query: 213 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+ +++ V+ GHRA++F+R GVQ V EG HF IPW Q PII+D RSRPR + TGSK
Sbjct: 24 NSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSK 83
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQ VNI+LR+L RP A+ L ++ +G DYDE+VLPSI E+LKSVVA+F+A +LITQR
Sbjct: 84 DLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQR 143
Query: 573 QQVSLLIXRELVERAADFNII 635
+ VS + +L ER A F +I
Sbjct: 144 ELVSRQVSDDLTERVATFGLI 164
>AY577780-1|AAS88903.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 161 bits (390), Expect = 2e-39
Identities = 77/141 (54%), Positives = 102/141 (72%)
Frame = +3
Query: 213 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+ +++ V+ GHRA++F+R GVQ V EG HF IPW Q II+D RSRPR + TGSK
Sbjct: 24 NSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKLIIFDCRSRPRNVPVITGSK 83
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQ VNI+LR+L RP A+ L ++ +G DYDE+VLPSI E+LKSVVA+F+A +LITQR
Sbjct: 84 DLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQR 143
Query: 573 QQVSLLIXRELVERAADFNII 635
+ VS + +L ERAA F +I
Sbjct: 144 ELVSRQVSDDLTERAATFGLI 164
>U72511-1|AAC51639.1| 211|Homo sapiens B-cell receptor associated
protein protein.
Length = 211
Score = 145 bits (351), Expect = 1e-34
Identities = 73/90 (81%), Positives = 81/90 (90%)
Frame = +3
Query: 366 KISSPTGSKDLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKF 545
KISSPTGSKDLQMVNISLRVLSRP+A L +MY++LG DY+E+VLPSI NEVLKSVVAKF
Sbjct: 1 KISSPTGSKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKF 60
Query: 546 NASQLITQRQQVSLLIXRELVERAADFNII 635
NASQLITQR QVSLLI REL ERA DF++I
Sbjct: 61 NASQLITQRAQVSLLIRRELTERAKDFSLI 90
>BC005085-1|AAH05085.1| 156|Homo sapiens ZNF607 protein protein.
Length = 156
Score = 128 bits (309), Expect = 2e-29
Identities = 65/133 (48%), Positives = 88/133 (66%)
Frame = +3
Query: 213 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 392
+ ++ V+ GHRA +F++ GVQ V EG HF IP Q PII+D S+PR TGSK
Sbjct: 24 TSALCNVDAGHRAAIFDQFRGVQNIVVGEGTHFLIPCVQKPIIFDCCSQPRSAPVITGSK 83
Query: 393 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQR 572
DLQ VNI+L +L RP + L ++ +G DYDE VLP I E+LKS+VA+F+A +LITQR
Sbjct: 84 DLQNVNITLCILFRPITSQLPRIFTSIGEDYDECVLPFITTEILKSLVARFDAGELITQR 143
Query: 573 QQVSLLIXRELVE 611
+ VS + L+E
Sbjct: 144 ELVSSQVSNNLME 156
>BC014228-1|AAH14228.1| 201|Homo sapiens LOC494150 protein protein.
Length = 201
Score = 96.3 bits (229), Expect = 8e-20
Identities = 47/94 (50%), Positives = 66/94 (70%)
Frame = +3
Query: 354 SRPRKISSPTGSKDLQMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSV 533
S PR + TGSKDLQ VNI+LR++ +P A+ L ++ +G DYDE VL I E+LKSV
Sbjct: 11 SPPRNVPIITGSKDLQNVNITLRIIFQPVASQLPRIFTSIGEDYDEPVLTYITTEILKSV 70
Query: 534 VAKFNASQLITQRQQVSLLIXRELVERAADFNII 635
VA+F+A ++ITQR+ VS + +L E+AA F +I
Sbjct: 71 VARFDAGEVITQRELVSRQVSNDLTEQAATFGLI 104
>AY423265-1|AAQ99270.1| 112|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 112
Score = 29.9 bits (64), Expect = 7.9
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 336 IIYDIRSRPRKISSP-TGSKDLQMVNISLRVLSRPD-ANMLATMYRQLGTDY 485
IIYD+ +RP +IS+ +GSK ++++ L D AN + Y T Y
Sbjct: 49 IIYDVSNRPSQISNRFSGSKSGNTASLTISGLQAEDEANYYCSSYTSSSTRY 100
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,550,239
Number of Sequences: 237096
Number of extensions: 1998458
Number of successful extensions: 6695
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6689
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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