Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5j08
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    26   1.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   3.8  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   5.0  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   5.0  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +3

Query: 102 FSIKDFDYLAQKLYKMGCKLCGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLED 272
           FS  D D     +     + C PK+ + G+VL+V  ++ L  M V    + +  + D
Sbjct: 742 FSYNDSDQDKVVVTAQENRECPPKVFMLGIVLAVIAVVVLIGMAVLLLWKVLTSIHD 798


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 416 KLMSRYNQCNQVQQCRNPTILCIQGIS 336
           +L+ +YNQ +Q  QC    +L   G S
Sbjct: 360 ELLRKYNQSSQGSQCNQAIMLITDGPS 386


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 536 LHIATCFWQKKKQFYNGMELTAKITTPSILHTN 438
           L +   F Q+ KQF N     AK  +P   H+N
Sbjct: 144 LRLKHTFAQEAKQFCNAEIRAAKADSPENCHSN 176


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 523 VAICNYVCN*VVFLSIDNIGKHS*LHITQTIKNI 624
           V +C YVCN  V     +IG H  L+   TI+ +
Sbjct: 197 VVMCGYVCNLKVMTICCSIG-HCTLYTRMTIEMV 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,632
Number of Sequences: 2352
Number of extensions: 13843
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)